RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 NUDT17P0C025 328 aa4.59□□□□□ -1.68
CCNL1-215ENST00000474539 ZSCAN5DPP0CG00 497 aa4.59□□□□□ -1.68
CCNL1-215ENST00000474539 BMP4P12644 408 aa4.59□□□□□ -1.68
CCNL1-215ENST00000474539 TYRP14679 529 aa4.59□□□□□ -1.68
CCNL1-215ENST00000474539 IDO1P14902 403 aa4.59□□□□□ -1.68
CCNL1-215ENST00000474539 BMP7P18075 431 aa4.59□□□□□ -1.68
CCNL1-215ENST00000474539 MGAT1P26572 445 aa4.59□□□□□ -1.68
CCNL1-215ENST00000474539 EEFSECP57772 596 aaKnown RBP4.59□□□□□ -1.68
CCNL1-215ENST00000474539 BMPR2Q13873 1038 aa4.59□□□□□ -1.68
CCNL1-215ENST00000474539 GBX1Q14549 363 aa4.59□□□□□ -1.68
CCNL1-215ENST00000474539 TIMM50Q3ZCQ8 353 aa4.59□□□□□ -1.68
CCNL1-215ENST00000474539 MTX3Q5HYI7 312 aa4.59□□□□□ -1.68
CCNL1-215ENST00000474539 MS4A13Q5J8X5 152 aa4.59□□□□□ -1.68
CCNL1-215ENST00000474539 SAMD4BQ5PRF9 694 aaKnown RBP4.59□□□□□ -1.68
CCNL1-215ENST00000474539 PHF19Q5T6S3 580 aa4.59□□□□□ -1.68
CCNL1-215ENST00000474539 MROH9Q5TGP6 573 aa4.59□□□□□ -1.68
CCNL1-215ENST00000474539 LCN1P1Q5VSP4 162 aa4.59□□□□□ -1.68
CCNL1-215ENST00000474539 DUPD1Q68J44 220 aa4.59□□□□□ -1.68
CCNL1-215ENST00000474539 LRRC55Q6ZSA7 311 aa4.59□□□□□ -1.68
CCNL1-215ENST00000474539 PLEKHM3Q6ZWE6 761 aa4.59□□□□□ -1.68
CCNL1-215ENST00000474539 MARK2Q7KZI7 788 aaKnown RBP4.59□□□□□ -1.68
CCNL1-215ENST00000474539 ADGRG6Q86SQ4 1221 aa4.59□□□□□ -1.68
CCNL1-215ENST00000474539 ARL14Q8N4G2 192 aa4.59□□□□□ -1.68
CCNL1-215ENST00000474539 TRAM1L1Q8N609 369 aa4.59□□□□□ -1.68
CCNL1-215ENST00000474539 NAT16Q8N8M0 369 aa4.59□□□□□ -1.68
CCNL1-215ENST00000474539 SLC22A8Q8TCC7 542 aa4.59□□□□□ -1.68
CCNL1-215ENST00000474539 ISG20Q96AZ6 181 aaKnown RBP4.59□□□□□ -1.68
CCNL1-215ENST00000474539 ATXN7L3BQ96GX2 97 aa4.59□□□□□ -1.68
CCNL1-215ENST00000474539 HIC2Q96JB3 615 aa4.59□□□□□ -1.68
CCNL1-215ENST00000474539 ANKRD27Q96NW4 1050 aa4.59□□□□□ -1.68
CCNL1-215ENST00000474539 DACH2Q96NX9 599 aa4.59□□□□□ -1.68
CCNL1-215ENST00000474539 C16orf70Q9BSU1 422 aa4.59□□□□□ -1.68
CCNL1-215ENST00000474539 CARS2Q9HA77 564 aaKnown RBP4.59□□□□□ -1.68
CCNL1-215ENST00000474539 CERS4Q9HA82 394 aa4.59□□□□□ -1.68
CCNL1-215ENST00000474539 NGBQ9NPG2 151 aa4.59□□□□□ -1.68
CCNL1-215ENST00000474539 TMPRSS4Q9NRS4 437 aa4.59□□□□□ -1.68
CCNL1-215ENST00000474539 NOP53Q9NZM5 478 aaKnown RBP4.59□□□□□ -1.68
CCNL1-215ENST00000474539 NXT1Q9UKK6 140 aaKnown RBP4.59□□□□□ -1.68
CCNL1-215ENST00000474539 FBXO5Q9UKT4 447 aa4.59□□□□□ -1.68
CCNL1-215ENST00000474539 GNEQ9Y223 722 aaKnown RBP4.59□□□□□ -1.68
CCNL1-215ENST00000474539 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.58□□□□□ -1.68
CCNL1-215ENST00000474539 IGKV6D-21A0A0A0MT36 114 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 KIR2DS5A0A0G2JLQ3 304 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 A0A0G2JNG1 304 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 A0A1B0GTW7 788 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 TCRBV21S2A2A0A5A6 115 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 MCIDASD6RGH6 385 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 KIR2DS3K7RE56 304 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 NBNO60934 754 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 ECI2O75521 394 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 STK16O75716 305 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 SYNGR4O95473 234 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 CPSF4O95639 269 aaKnown RBP4.58□□□□□ -1.68
CCNL1-215ENST00000474539 MPC1LP0DKB6 136 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 JUPP14923 745 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 TNFRSF8P28908 595 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 NUP62P37198 522 aaPredicted RBP4.58□□□□□ -1.68
CCNL1-215ENST00000474539 TNFSF9P41273 254 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 KHKP50053 298 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 SEC13P55735 322 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 FOXK1P85037 733 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 SIM2Q14190 667 aaPredicted RBP4.58□□□□□ -1.68
CCNL1-215ENST00000474539 KIR2DS5Q14953 304 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 MAPK11Q15759 364 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 KYNUQ16719 465 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 PLEKHG6Q3KR16 790 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 LRIF1Q5T3J3 769 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 KIAA0319Q5VV43 1072 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 ANKRD54Q6NXT1 300 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 WDR93Q6P2C0 686 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 ZCCHC12Q6PEW1 402 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 CCNI2Q6ZMN8 369 aaPredicted RBP4.58□□□□□ -1.68
CCNL1-215ENST00000474539 TAC4Q86UU9 113 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 RANBP3LQ86VV4 465 aaPredicted RBP4.58□□□□□ -1.68
CCNL1-215ENST00000474539 FNDC5Q8NAU1 212 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 KLHDC9Q8NEP7 349 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 B4GALNT2Q8NHY0 566 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 LMX1AQ8TE12 382 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 NSL1Q96IY1 281 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 MAGED4Q96JG8 741 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 MS4A4AQ96JQ5 239 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 NSMCE2Q96MF7 247 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 ZIM3Q96PE6 472 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 VPS35Q96QK1 796 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 GORASP1Q9BQQ3 440 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 TACO1Q9BSH4 297 aaKnown RBP4.58□□□□□ -1.68
CCNL1-215ENST00000474539 DNAJC18Q9H819 358 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 C14orf105Q9NVL8 296 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 GALNT8Q9NY28 637 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 KCNK4Q9NYG8 393 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 NKIRAS2Q9NYR9 191 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 CPNE7Q9UBL6 633 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 FETUBQ9UGM5 382 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 EVLQ9UI08 416 aaPredicted RBP4.58□□□□□ -1.68
CCNL1-215ENST00000474539 FZD10Q9ULW2 581 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 VWA7Q9Y334 891 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 PCDHGB1Q9Y5G3 927 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 AP1M2Q9Y6Q5 423 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 IGKV6-21A0A0C4DH24 114 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 E7ENQ6 273 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms