RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 CNOT1A5YKK6 2376 aaKnown RBP13.59□□□□□ -0.23
USF1-205ENST00000473969 CCDC78A2IDD5 438 aa13.59□□□□□ -0.23
USF1-205ENST00000473969 EME2A4GXA9 379 aaPredicted RBP13.59□□□□□ -0.23
USF1-205ENST00000473969 PCNX2A6NKB5 2137 aa13.59□□□□□ -0.23
USF1-205ENST00000473969 CFAP99D6REC4 459 aa13.59□□□□□ -0.23
USF1-205ENST00000473969 CCDC188H7C350 402 aa13.59□□□□□ -0.23
USF1-205ENST00000473969 ZW10O43264 779 aa13.59□□□□□ -0.23
USF1-205ENST00000473969 GP1BAP07359 652 aa13.59□□□□□ -0.23
USF1-205ENST00000473969 MYF5P13349 255 aa13.59□□□□□ -0.23
USF1-205ENST00000473969 ACP5P13686 325 aa13.59□□□□□ -0.23
USF1-205ENST00000473969 SLC2A4P14672 509 aa13.59□□□□□ -0.23
USF1-205ENST00000473969 MC4RP32245 332 aa13.59□□□□□ -0.23
USF1-205ENST00000473969 GRIA1P42261 906 aa13.59□□□□□ -0.23
USF1-205ENST00000473969 INSCQ1MX18 579 aa13.59□□□□□ -0.23
USF1-205ENST00000473969 GPR33Q49SQ1 333 aa13.59□□□□□ -0.23
USF1-205ENST00000473969 CCDC38Q502W7 563 aa13.59□□□□□ -0.23
USF1-205ENST00000473969 PCID2Q5JVF3 399 aa13.59□□□□□ -0.23
USF1-205ENST00000473969 GPRC6AQ5T6X5 926 aa13.59□□□□□ -0.23
USF1-205ENST00000473969 LRRC8BQ6P9F7 803 aa13.59□□□□□ -0.23
USF1-205ENST00000473969 DHRS13Q6UX07 377 aa13.59□□□□□ -0.23
USF1-205ENST00000473969 EFL1Q7Z2Z2 1120 aaKnown RBP13.59□□□□□ -0.23
USF1-205ENST00000473969 CREG2Q8IUH2 290 aa13.59□□□□□ -0.23
USF1-205ENST00000473969 TRAPPC5Q8IUR0 188 aa13.59□□□□□ -0.23
USF1-205ENST00000473969 KLHL7Q8IXQ5 586 aa13.59□□□□□ -0.23
USF1-205ENST00000473969 SLC35F3Q8IY50 421 aa13.59□□□□□ -0.23
USF1-205ENST00000473969 PTCD2Q8WV60 388 aaKnown RBP13.59□□□□□ -0.23
USF1-205ENST00000473969 CDKN2AIPNLQ96HQ2 116 aa13.59□□□□□ -0.23
USF1-205ENST00000473969 ZNF514Q96K75 400 aaPredicted RBP13.59□□□□□ -0.23
USF1-205ENST00000473969 RANBP9Q96S59 729 aa13.59□□□□□ -0.23
USF1-205ENST00000473969 IL22Q9GZX6 179 aa13.59□□□□□ -0.23
USF1-205ENST00000473969 SMOXQ9NWM0 555 aa13.59□□□□□ -0.23
USF1-205ENST00000473969 TOR4AQ9NXH8 423 aa13.59□□□□□ -0.23
USF1-205ENST00000473969 COL5A1P20908 1838 aaPredicted RBP13.58□□□□□ -0.24
USF1-205ENST00000473969 MROH6A6NGR9 719 aa13.58□□□□□ -0.24
USF1-205ENST00000473969 H7C0S8 307 aa13.58□□□□□ -0.24
USF1-205ENST00000473969 HYAL3O43820 417 aaPredicted RBP13.58□□□□□ -0.24
USF1-205ENST00000473969 SNX2O60749 519 aa13.58□□□□□ -0.24
USF1-205ENST00000473969 JUPP14923 745 aa13.58□□□□□ -0.24
USF1-205ENST00000473969 PMLP29590 882 aa13.58□□□□□ -0.24
USF1-205ENST00000473969 PPARGP37231 505 aaPredicted RBP13.58□□□□□ -0.24
USF1-205ENST00000473969 PRAMEP78395 509 aa13.58□□□□□ -0.24
USF1-205ENST00000473969 XIAPP98170 497 aa13.58□□□□□ -0.24
USF1-205ENST00000473969 CACNG1Q06432 222 aa13.58□□□□□ -0.24
USF1-205ENST00000473969 C14orf28Q4W4Y0 310 aa13.58□□□□□ -0.24
USF1-205ENST00000473969 TSTD2Q5T7W7 516 aa13.58□□□□□ -0.24
USF1-205ENST00000473969 GUSBP11Q6P575 273 aa13.58□□□□□ -0.24
USF1-205ENST00000473969 OGFOD3Q6PK18 319 aa13.58□□□□□ -0.24
USF1-205ENST00000473969 SYDE1Q6ZW31 735 aaPredicted RBP13.58□□□□□ -0.24
USF1-205ENST00000473969 RAB44Q7Z6P3 723 aaPredicted RBP13.58□□□□□ -0.24
USF1-205ENST00000473969 PCGF5Q86SE9 256 aa13.58□□□□□ -0.24
USF1-205ENST00000473969 NRROSQ86YC3 692 aa13.58□□□□□ -0.24
USF1-205ENST00000473969 KYQ8NBH2 561 aa13.58□□□□□ -0.24
USF1-205ENST00000473969 DDHD1Q8NEL9 900 aa13.58□□□□□ -0.24
USF1-205ENST00000473969 OR6P1Q8NGX9 317 aa13.58□□□□□ -0.24
USF1-205ENST00000473969 MAPK15Q8TD08 544 aa13.58□□□□□ -0.24
USF1-205ENST00000473969 PEX13Q92968 403 aa13.58□□□□□ -0.24
USF1-205ENST00000473969 COPS8Q99627 209 aa13.58□□□□□ -0.24
USF1-205ENST00000473969 OSGEPL1Q9H4B0 414 aa13.58□□□□□ -0.24
USF1-205ENST00000473969 FAM96AQ9H5X1 160 aa13.58□□□□□ -0.24
USF1-205ENST00000473969 STN1Q9H668 368 aaKnown RBP13.58□□□□□ -0.24
USF1-205ENST00000473969 KLC4Q9NSK0 619 aa13.58□□□□□ -0.24
USF1-205ENST00000473969 SPATS2LQ9NUQ6 558 aaKnown RBP13.58□□□□□ -0.24
USF1-205ENST00000473969 PCYOX1Q9UHG3 505 aa13.58□□□□□ -0.24
USF1-205ENST00000473969 ANAPC5Q9UJX4 755 aa13.58□□□□□ -0.24
USF1-205ENST00000473969 RIMKLBQ9ULI2 386 aa13.58□□□□□ -0.24
USF1-205ENST00000473969 KCNK6Q9Y257 313 aa13.58□□□□□ -0.24
USF1-205ENST00000473969 TCAF1Q9Y4C2 921 aa13.58□□□□□ -0.24
USF1-205ENST00000473969 PLEKHM1Q9Y4G2 1056 aa13.58□□□□□ -0.24
USF1-205ENST00000473969 RHPN2P1A8MT19 583 aa13.57□□□□□ -0.24
USF1-205ENST00000473969 CCL22O00626 93 aa13.57□□□□□ -0.24
USF1-205ENST00000473969 GAPDHSO14556 408 aaPredicted RBP13.57□□□□□ -0.24
USF1-205ENST00000473969 CHUKO15111 745 aa13.57□□□□□ -0.24
USF1-205ENST00000473969 KCNJ13O60928 360 aa13.57□□□□□ -0.24
USF1-205ENST00000473969 ZNF7P17097 686 aaPredicted RBP13.57□□□□□ -0.24
USF1-205ENST00000473969 DR1Q01658 176 aa13.57□□□□□ -0.24
USF1-205ENST00000473969 KCNJ11Q14654 390 aa13.57□□□□□ -0.24
USF1-205ENST00000473969 PLA2G4EQ3MJ16 856 aa13.57□□□□□ -0.24
USF1-205ENST00000473969 LYPLAL1Q5VWZ2 237 aa13.57□□□□□ -0.24
USF1-205ENST00000473969 CASC4Q6P4E1 433 aa13.57□□□□□ -0.24
USF1-205ENST00000473969 TMEM220Q6QAJ8 160 aa13.57□□□□□ -0.24
USF1-205ENST00000473969 AFTPHQ6ULP2 937 aa13.57□□□□□ -0.24
USF1-205ENST00000473969 TMPRSS12Q86WS5 348 aa13.57□□□□□ -0.24
USF1-205ENST00000473969 PPIL6Q8IXY8 311 aa13.57□□□□□ -0.24
USF1-205ENST00000473969 NXPE1Q8N323 547 aa13.57□□□□□ -0.24
USF1-205ENST00000473969 GPR156Q8NFN8 814 aa13.57□□□□□ -0.24
USF1-205ENST00000473969 WDR48Q8TAF3 677 aa13.57□□□□□ -0.24
USF1-205ENST00000473969 C16orf45Q96MC5 204 aaPredicted RBP13.57□□□□□ -0.24
USF1-205ENST00000473969 TIMM29Q9BSF4 260 aa13.57□□□□□ -0.24
USF1-205ENST00000473969 SCNM1Q9BWG6 230 aa13.57□□□□□ -0.24
USF1-205ENST00000473969 SYNDIG1Q9H7V2 258 aa13.57□□□□□ -0.24
USF1-205ENST00000473969 XAB2Q9HCS7 855 aaKnown RBP13.57□□□□□ -0.24
USF1-205ENST00000473969 SAMD15Q9P1V8 674 aa13.57□□□□□ -0.24
USF1-205ENST00000473969 TMPRSS11EQ9UL52 423 aa13.57□□□□□ -0.24
USF1-205ENST00000473969 KLHL33A6NCF5 533 aa13.56□□□□□ -0.24
USF1-205ENST00000473969 OR2AG2A6NM03 316 aa13.56□□□□□ -0.24
USF1-205ENST00000473969 OR5K4A6NMS3 321 aa13.56□□□□□ -0.24
USF1-205ENST00000473969 F8W8V4 182 aa13.56□□□□□ -0.24
USF1-205ENST00000473969 GPR39O43194 453 aa13.56□□□□□ -0.24
USF1-205ENST00000473969 NOBOXO60393 691 aa13.56□□□□□ -0.24
USF1-205ENST00000473969 DKK1O94907 266 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms