RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 HLA-FP30511 346 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 SHMT1P34896 483 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 HTR2BP41595 481 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 NR4A2P43354 598 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 RPS9P46781 194 aaKnown RBP4.83□□□□□ -1.64
SF3B1-207ENST00000468925 HAAOP46952 286 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 ATP4BP51164 291 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 MAPK12P53778 367 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 NAPAP54920 295 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 SLC12A2P55011 1212 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 PSMD4P55036 377 aaKnown RBP4.83□□□□□ -1.64
SF3B1-207ENST00000468925 DCDC1P59894 354 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 CXCR4P61073 352 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 VBP1P61758 197 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 POLR2GP62487 172 aaKnown RBP eCLIP4.83□□□□□ -1.64
SF3B1-207ENST00000468925 RPL10AP62906 217 aaKnown RBP4.83□□□□□ -1.64
SF3B1-207ENST00000468925 PRAMEP78395 509 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 GSTO1P78417 241 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 CYP4F8P98187 520 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 FLI1Q01543 452 aaPredicted RBP4.83□□□□□ -1.64
SF3B1-207ENST00000468925 RHAGQ02094 409 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 GBE1Q04446 702 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 TNK2Q07912 1038 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 FOXM1Q08050 763 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 NRF1Q16656 503 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 UGP2Q16851 508 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 HSF5Q4G112 596 aaPredicted RBP4.83□□□□□ -1.64
SF3B1-207ENST00000468925 LRRC24Q50LG9 513 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 FASTKD1Q53R41 847 aaKnown RBP4.83□□□□□ -1.64
SF3B1-207ENST00000468925 COQ5Q5HYK3 327 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 TOR1AIP1Q5JTV8 583 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 ATAD3CQ5T2N8 411 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 ZBTB37Q5TC79 503 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 UBE2UQ5VVX9 321 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 MBLAC2Q68D91 279 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 CXorf57Q6NSI4 855 aaKnown RBP4.83□□□□□ -1.64
SF3B1-207ENST00000468925 ARSKQ6UWY0 536 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 ZNF704Q6ZNC4 412 aaPredicted RBP4.83□□□□□ -1.64
SF3B1-207ENST00000468925 ZNF600Q6ZNG1 722 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 FAM196AQ6ZSG2 479 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 THAP5Q7Z6K1 395 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 TLK2Q86UE8 772 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 FAM124AQ86V42 546 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 LSRQ86X29 649 aaPredicted RBP4.83□□□□□ -1.64
SF3B1-207ENST00000468925 DHFR2Q86XF0 187 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 CATSPER3Q86XQ3 398 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 STX12Q86Y82 276 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 RHPN2Q8IUC4 686 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 PLD3Q8IV08 490 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 RASGRP3Q8IV61 690 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 CDH26Q8IXH8 852 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 GPALPP1Q8IXQ4 340 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 THNSL1Q8IYQ7 743 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 MICU2Q8IYU8 434 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 C8orf59Q8N0T1 100 aaPredicted RBP4.83□□□□□ -1.64
SF3B1-207ENST00000468925 CLIP4Q8N3C7 705 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 AADATQ8N5Z0 425 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 FAM71DQ8N9W8 422 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 FBXO36Q8NEA4 188 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 PPHLN1Q8NEY8 458 aaKnown RBP4.83□□□□□ -1.64
SF3B1-207ENST00000468925 IL17RDQ8NFM7 739 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 CMASQ8NFW8 434 aaPredicted RBP4.83□□□□□ -1.64
SF3B1-207ENST00000468925 OR7G3Q8NG95 312 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 OR13J1Q8NGT2 312 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 OR10T2Q8NGX3 314 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 VANGL1Q8TAA9 524 aaPredicted RBP4.83□□□□□ -1.64
SF3B1-207ENST00000468925 OLIG1Q8TAK6 271 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 SYTL5Q8TDW5 730 aaPredicted RBP4.83□□□□□ -1.64
SF3B1-207ENST00000468925 RSAD2Q8WXG1 361 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 SLC5A5Q92911 643 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 FKBP10Q96AY3 582 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 SH3KBP1Q96B97 665 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 ZFYVE19Q96K21 471 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 ZNF512Q96ME7 567 aaPredicted RBP4.83□□□□□ -1.64
SF3B1-207ENST00000468925 UROC1Q96N76 676 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 TSNARE1Q96NA8 513 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 FERD3LQ96RJ6 166 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 PLIN2Q99541 437 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 GAL3ST1Q99999 423 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 KCTD14Q9BQ13 255 aaPredicted RBP4.83□□□□□ -1.64
SF3B1-207ENST00000468925 LBHD1Q9BQE6 289 aaPredicted RBP4.83□□□□□ -1.64
SF3B1-207ENST00000468925 CENPOQ9BU64 300 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 ZSCAN5AQ9BUG6 496 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 APOL6Q9BWW8 343 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 APOL5Q9BWW9 433 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 GTPBP2Q9BX10 602 aaKnown RBP4.83□□□□□ -1.64
SF3B1-207ENST00000468925 TRIM8Q9BZR9 551 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 GPR88Q9GZN0 384 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 ILKAPQ9H0C8 392 aaPredicted RBP4.83□□□□□ -1.64
SF3B1-207ENST00000468925 DSN1Q9H410 356 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 TMEM206Q9H813 350 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 TIGARQ9NQ88 270 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 CYP26B1Q9NR63 512 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 TBC1D13Q9NVG8 400 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 DMAC2Q9NW81 257 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 TMEM45AQ9NWC5 275 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 ASNSD1Q9NWL6 643 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 REV1Q9UBZ9 1251 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 WARS2Q9UGM6 360 aaKnown RBP4.83□□□□□ -1.64
SF3B1-207ENST00000468925 TEKT2Q9UIF3 430 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms