RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 KIF19Q2TAC6 998 aa16.53■□□□□ 0.24
CCDC43-202ENST00000457422 RARS2Q5T160 578 aaKnown RBP16.53■□□□□ 0.24
CCDC43-202ENST00000457422 RETSATQ6NUM9 610 aa16.53■□□□□ 0.24
CCDC43-202ENST00000457422 DDIASQ8IXT1 998 aa16.53■□□□□ 0.24
CCDC43-202ENST00000457422 APCDD1Q8J025 514 aa16.53■□□□□ 0.24
CCDC43-202ENST00000457422 PCYOX1LQ8NBM8 494 aa16.53■□□□□ 0.24
CCDC43-202ENST00000457422 FAM156AQ8NDB6 213 aa16.53■□□□□ 0.24
CCDC43-202ENST00000457422 CATSPER1Q8NEC5 780 aa16.53■□□□□ 0.24
CCDC43-202ENST00000457422 RIN3Q8TB24 985 aa16.53■□□□□ 0.24
CCDC43-202ENST00000457422 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.53■□□□□ 0.24
CCDC43-202ENST00000457422 KLHL32Q96NJ5 620 aa16.53■□□□□ 0.24
CCDC43-202ENST00000457422 SDR39U1Q9NRG7 319 aaPredicted RBP16.53■□□□□ 0.24
CCDC43-202ENST00000457422 MRPL17Q9NRX2 175 aaKnown RBP16.53■□□□□ 0.24
CCDC43-202ENST00000457422 SPATS2LQ9NUQ6 558 aaKnown RBP16.53■□□□□ 0.24
CCDC43-202ENST00000457422 TMEM39AQ9NV64 488 aa16.53■□□□□ 0.24
CCDC43-202ENST00000457422 LSM7Q9UK45 103 aaKnown RBP16.53■□□□□ 0.24
CCDC43-202ENST00000457422 BTRCQ9Y297 605 aa16.53■□□□□ 0.24
CCDC43-202ENST00000457422 DTNAQ9Y4J8 743 aa16.53■□□□□ 0.24
CCDC43-202ENST00000457422 A0A0J9YYE9 177 aa16.52■□□□□ 0.24
CCDC43-202ENST00000457422 PRMT5O14744 637 aaPredicted RBP16.52■□□□□ 0.24
CCDC43-202ENST00000457422 HTRA2O43464 458 aaPredicted RBP16.52■□□□□ 0.24
CCDC43-202ENST00000457422 PIM1P11309 404 aaPredicted RBP16.52■□□□□ 0.24
CCDC43-202ENST00000457422 TCN1P20061 433 aaPredicted RBP16.52■□□□□ 0.24
CCDC43-202ENST00000457422 CHRM3P20309 590 aa16.52■□□□□ 0.24
CCDC43-202ENST00000457422 RPS3P23396 243 aaKnown RBP eCLIP16.52■□□□□ 0.24
CCDC43-202ENST00000457422 MAPK8P45983 427 aa16.52■□□□□ 0.24
CCDC43-202ENST00000457422 AGTR2P50052 363 aa16.52■□□□□ 0.24
CCDC43-202ENST00000457422 HTRA3P83110 453 aa16.52■□□□□ 0.24
CCDC43-202ENST00000457422 GRB7Q14451 532 aa16.52■□□□□ 0.24
CCDC43-202ENST00000457422 SAMD4BQ5PRF9 694 aaKnown RBP16.52■□□□□ 0.24
CCDC43-202ENST00000457422 MPP7Q5T2T1 576 aa16.52■□□□□ 0.24
CCDC43-202ENST00000457422 GPSM1Q86YR5 675 aa16.52■□□□□ 0.24
CCDC43-202ENST00000457422 TICAM1Q8IUC6 712 aa16.52■□□□□ 0.24
CCDC43-202ENST00000457422 CPNE9Q8IYJ1 553 aa16.52■□□□□ 0.24
CCDC43-202ENST00000457422 MIER2Q8N344 545 aa16.52■□□□□ 0.24
CCDC43-202ENST00000457422 CPXM2Q8N436 756 aa16.52■□□□□ 0.24
CCDC43-202ENST00000457422 TUBGCP3Q96CW5 907 aa16.52■□□□□ 0.24
CCDC43-202ENST00000457422 SPDL1Q96EA4 605 aa16.52■□□□□ 0.24
CCDC43-202ENST00000457422 LRGUKQ96M69 825 aa16.52■□□□□ 0.24
CCDC43-202ENST00000457422 SARS2Q9NP81 518 aaKnown RBP16.52■□□□□ 0.24
CCDC43-202ENST00000457422 ZNF510Q9Y2H8 683 aa16.52■□□□□ 0.24
CCDC43-202ENST00000457422 NDUFAF1Q9Y375 327 aa16.52■□□□□ 0.24
CCDC43-202ENST00000457422 DHRS7Q9Y394 339 aa16.52■□□□□ 0.24
CCDC43-202ENST00000457422 PRORSD1PA6NEY8 169 aa16.52■□□□□ 0.23
CCDC43-202ENST00000457422 GOLGA8CPA6NN73 597 aa16.52■□□□□ 0.23
CCDC43-202ENST00000457422 SMAD6O43541 496 aaKnown RBP16.52■□□□□ 0.23
CCDC43-202ENST00000457422 LILRB3O75022 631 aa16.52■□□□□ 0.23
CCDC43-202ENST00000457422 SOCS5O75159 536 aa16.52■□□□□ 0.23
CCDC43-202ENST00000457422 UROSP10746 265 aa16.52■□□□□ 0.23
CCDC43-202ENST00000457422 IDO1P14902 403 aa16.52■□□□□ 0.23
CCDC43-202ENST00000457422 GRIK2Q13002 908 aa16.52■□□□□ 0.23
CCDC43-202ENST00000457422 MED21Q13503 144 aa16.52■□□□□ 0.23
CCDC43-202ENST00000457422 GRAMD1BQ3KR37 738 aa16.52■□□□□ 0.23
CCDC43-202ENST00000457422 XKR7Q5GH72 579 aa16.52■□□□□ 0.23
CCDC43-202ENST00000457422 COQ5Q5HYK3 327 aa16.52■□□□□ 0.23
CCDC43-202ENST00000457422 HTR3DQ70Z44 454 aa16.52■□□□□ 0.23
CCDC43-202ENST00000457422 METTL3Q86U44 580 aaKnown RBP16.52■□□□□ 0.23
CCDC43-202ENST00000457422 CAMK1DQ8IU85 385 aa16.52■□□□□ 0.23
CCDC43-202ENST00000457422 ICA1LQ8NDH6 482 aa16.52■□□□□ 0.23
CCDC43-202ENST00000457422 ADCY4Q8NFM4 1077 aa16.52■□□□□ 0.23
CCDC43-202ENST00000457422 OR56A4Q8NGH8 313 aa16.52■□□□□ 0.23
CCDC43-202ENST00000457422 DIS3LQ8TF46 1054 aaKnown RBP16.52■□□□□ 0.23
CCDC43-202ENST00000457422 DUS3LQ96G46 650 aaKnown RBP16.52■□□□□ 0.23
CCDC43-202ENST00000457422 GPATCH1Q9BRR8 931 aaKnown RBP16.52■□□□□ 0.23
CCDC43-202ENST00000457422 NUDT4Q9NZJ9 180 aa16.52■□□□□ 0.23
CCDC43-202ENST00000457422 PDP2Q9P2J9 529 aa16.52■□□□□ 0.23
CCDC43-202ENST00000457422 ZNF225Q9UK10 706 aa16.52■□□□□ 0.23
CCDC43-202ENST00000457422 IQCF5A8MTL0 148 aa16.51■□□□□ 0.23
CCDC43-202ENST00000457422 SNX2O60749 519 aa16.51■□□□□ 0.23
CCDC43-202ENST00000457422 HGFP14210 728 aa16.51■□□□□ 0.23
CCDC43-202ENST00000457422 VCLP18206 1134 aa16.51■□□□□ 0.23
CCDC43-202ENST00000457422 GABRR2P28476 465 aa16.51■□□□□ 0.23
CCDC43-202ENST00000457422 NME5P56597 212 aa16.51■□□□□ 0.23
CCDC43-202ENST00000457422 SLC7A9P82251 487 aa16.51■□□□□ 0.23
CCDC43-202ENST00000457422 CREMQ03060 361 aa16.51■□□□□ 0.23
CCDC43-202ENST00000457422 TGFBIQ15582 683 aa16.51■□□□□ 0.23
CCDC43-202ENST00000457422 SPATA19Q7Z5L4 167 aa16.51■□□□□ 0.23
CCDC43-202ENST00000457422 SYVN1Q86TM6 617 aa16.51■□□□□ 0.23
CCDC43-202ENST00000457422 RETREG3Q86VR2 466 aa16.51■□□□□ 0.23
CCDC43-202ENST00000457422 SPATA24Q86W54 205 aa16.51■□□□□ 0.23
CCDC43-202ENST00000457422 LILRA2Q8N149 483 aa16.51■□□□□ 0.23
CCDC43-202ENST00000457422 DDI1Q8WTU0 396 aa16.51■□□□□ 0.23
CCDC43-202ENST00000457422 TSPEARQ8WU66 669 aa16.51■□□□□ 0.23
CCDC43-202ENST00000457422 EVLQ9UI08 416 aaPredicted RBP16.51■□□□□ 0.23
CCDC43-202ENST00000457422 E2F3O00716 465 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 GAPDHSO14556 408 aaPredicted RBP16.5■□□□□ 0.23
CCDC43-202ENST00000457422 RNASEH1O60930 286 aaKnown RBP16.5■□□□□ 0.23
CCDC43-202ENST00000457422 CRCPO75575 148 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 TRBC1P01850 177 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 LINC00032P0C843 101 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 UBTFL6P0CB48 400 aaPredicted RBP16.5■□□□□ 0.23
CCDC43-202ENST00000457422 CA8P35219 290 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 ECT2LQ008S8 904 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 BCL2L1Q07817 233 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 RALGDSQ12967 914 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 LAYNQ6UX15 382 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 GAREM2Q75VX8 874 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 HS6ST3Q8IZP7 471 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 MRPS31Q92665 395 aaKnown RBP16.5■□□□□ 0.23
CCDC43-202ENST00000457422 CCDC97Q96F63 343 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms