RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 HACD1B0YJ81 288 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 KIR2DS3K7RE56 304 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 CCL4P13236 92 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 F3P13726 295 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 MPSTP25325 297 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 CD82P27701 267 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 CD68P34810 354 aaPredicted RBP12.73□□□□□ -0.37
CHD3-206ENST00000452447 MARCKSL1P49006 195 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 WNT3AP56704 352 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 NFATC2Q13469 925 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 KIR2DS5Q14953 304 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 PPP2R5EQ16537 467 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 INSCQ1MX18 579 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.73□□□□□ -0.37
CHD3-206ENST00000452447 ZNF648Q5T619 568 aaPredicted RBP12.73□□□□□ -0.37
CHD3-206ENST00000452447 TMEM71Q6P5X7 295 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 ZNF567Q8N184 647 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 CALR3Q96L12 384 aaKnown RBP12.73□□□□□ -0.37
CHD3-206ENST00000452447 PLEKHG4BQ96PX9 1271 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 PANX2Q96RD6 677 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 HEMGNQ9BXL5 484 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.73□□□□□ -0.37
CHD3-206ENST00000452447 B3GNT4Q9C0J1 378 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 TRABDQ9H4I3 376 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 BPIFA1Q9NP55 256 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 SARS2Q9NP81 518 aaKnown RBP12.73□□□□□ -0.37
CHD3-206ENST00000452447 KLC4Q9NSK0 619 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 FOXJ2Q9P0K8 574 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 SPO11Q9Y5K1 396 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 CFAP46Q8IYW2 2715 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 C9orf172C9J069 976 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 F5H423 210 aaPredicted RBP12.73□□□□□ -0.37
CHD3-206ENST00000452447 APOC4-APOC2K7ER74 178 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 AURKAO14965 403 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 VEGFDO43915 354 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 NDUFA10O95299 355 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 APOC2P02655 101 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 THRAP10827 490 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 CSF2RBP32927 897 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 HMGCLP35914 325 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 ZNF75DP51815 510 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 MPP3Q13368 585 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 MANEAQ5SRI9 462 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 CRTC3Q6UUV7 619 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 BBS12Q6ZW61 710 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 ADGRG6Q86SQ4 1221 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 LRRTM4Q86VH4 590 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 ZFAND4Q86XD8 727 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 TMTC1Q8IUR5 882 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 SLC25A41Q8N5S1 370 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 IPMKQ8NFU5 416 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 GDAP1Q8TB36 358 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 KRT35Q92764 455 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 WBP1Q96G27 269 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 MRFAP1L1Q96HT8 127 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 TTC25Q96NG3 672 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 QKIQ96PU8 341 aaKnown RBP eCLIP12.73□□□□□ -0.37
CHD3-206ENST00000452447 FCRL5Q96RD9 977 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 TAAR9Q96RI9 348 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 FSD1LQ9BXM9 530 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 PRDM8Q9NQV8 689 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 HACD3Q9P035 362 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 TMEM9Q9P0T7 183 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 CPNE7Q9UBL6 633 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 RSPH14Q9UHP6 348 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 TRHDEQ9UKU6 1024 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 ZNF462Q96JM2 2506 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 MACROD2A1Z1Q3 448 aa12.72□□□□□ -0.37
CHD3-206ENST00000452447 A6NCN8 305 aa12.72□□□□□ -0.37
CHD3-206ENST00000452447 SOWAHDA6NJG2 315 aa12.72□□□□□ -0.37
CHD3-206ENST00000452447 H7C0C1 242 aa12.72□□□□□ -0.37
CHD3-206ENST00000452447 CHUKO15111 745 aa12.72□□□□□ -0.37
CHD3-206ENST00000452447 KMOO15229 486 aa12.72□□□□□ -0.37
CHD3-206ENST00000452447 MTX2O75431 263 aa12.72□□□□□ -0.37
CHD3-206ENST00000452447 CDK14O94921 469 aa12.72□□□□□ -0.37
CHD3-206ENST00000452447 FGF3P11487 239 aaPredicted RBP12.72□□□□□ -0.37
CHD3-206ENST00000452447 CTNNA2P26232 953 aa12.72□□□□□ -0.37
CHD3-206ENST00000452447 CETN2P41208 172 aa12.72□□□□□ -0.37
CHD3-206ENST00000452447 MAPK9P45984 424 aa12.72□□□□□ -0.37
CHD3-206ENST00000452447 ATP5OP48047 213 aa12.72□□□□□ -0.37
CHD3-206ENST00000452447 CLCNKAP51800 687 aa12.72□□□□□ -0.37
CHD3-206ENST00000452447 EPHA4P54764 986 aa12.72□□□□□ -0.37
CHD3-206ENST00000452447 COPS2P61201 443 aa12.72□□□□□ -0.37
CHD3-206ENST00000452447 CFHR1Q03591 330 aa12.72□□□□□ -0.37
CHD3-206ENST00000452447 XRCC4Q13426 336 aa12.72□□□□□ -0.37
CHD3-206ENST00000452447 PLA2G4EQ3MJ16 856 aa12.72□□□□□ -0.37
CHD3-206ENST00000452447 SIRPB2Q5JXA9 342 aa12.72□□□□□ -0.37
CHD3-206ENST00000452447 SNAP47Q5SQN1 464 aa12.72□□□□□ -0.37
CHD3-206ENST00000452447 KIAA1614Q5VZ46 1190 aa12.72□□□□□ -0.37
CHD3-206ENST00000452447 ZDHHC20Q5W0Z9 365 aa12.72□□□□□ -0.37
CHD3-206ENST00000452447 WDR74Q6RFH5 385 aaPredicted RBP12.72□□□□□ -0.37
CHD3-206ENST00000452447 KDELC1Q6UW63 502 aa12.72□□□□□ -0.37
CHD3-206ENST00000452447 FAM129CQ86XR2 697 aa12.72□□□□□ -0.37
CHD3-206ENST00000452447 TRIM48Q8IWZ4 208 aa12.72□□□□□ -0.37
CHD3-206ENST00000452447 BLOC1S5Q8TDH9 187 aa12.72□□□□□ -0.37
CHD3-206ENST00000452447 NCSTNQ92542 709 aa12.72□□□□□ -0.37
CHD3-206ENST00000452447 OXNAD1Q96HP4 312 aaPredicted RBP12.72□□□□□ -0.37
CHD3-206ENST00000452447 MRGPRX2Q96LB1 330 aa12.72□□□□□ -0.37
CHD3-206ENST00000452447 VPS35Q96QK1 796 aa12.72□□□□□ -0.37
CHD3-206ENST00000452447 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms