RNA–Protein interactions for RNA: ENST00000446623.2

HMGN1P36-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 36, humanhuman

BASIC

Gene HMGN1P36, Length 298 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P36-201ENST00000446623 NOMO3P69849 1222 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 ILF3Q12906 894 aaKnown RBP eCLIP5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 KLRB1Q12918 225 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 BIRC2Q13490 618 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 SQSTM1Q13501 440 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 SLBPQ14493 270 aaKnown RBP eCLIP5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 PLCL1Q15111 1095 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 IFI16Q16666 785 aaKnown RBP5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 PARP15Q460N3 678 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 LACTB2Q53H82 288 aaPredicted RBP5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 NAA35Q5VZE5 725 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 AFMIDQ63HM1 303 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 DPY19L2P1Q6NXN4 242 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 PNCKQ6P2M8 343 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 TMEM71Q6P5X7 295 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 SLC30A9Q6PML9 568 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 LIPIQ6XZB0 460 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 DPPA4Q7L190 304 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 FAM214BQ7L5A3 538 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 TIPARPQ7Z3E1 657 aaKnown RBP5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 PHLDB2Q86SQ0 1253 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 FAM129CQ86XR2 697 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 NRSN1Q8IZ57 195 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 UMODL1-AS1Q8N2C9 162 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 PYROXD2Q8N2H3 581 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 RTL3Q8N8U3 475 aaKnown RBP5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 KCT2Q8NC54 265 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 MSANTD4Q8NCY6 345 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 JOSD2Q8TAC2 188 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 GPT2Q8TD30 523 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 STARD8Q92502 1023 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 NTAN1Q96AB6 310 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 KIAA1143Q96AT1 154 aaPredicted RBP5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 RTP4Q96DX8 246 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 TEFMQ96QE5 360 aaKnown RBP5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 TUBGCP5Q96RT8 1024 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 CTRCQ99895 268 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 GSDMCQ9BYG8 508 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 WNT10AQ9GZT5 417 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 ATP13A3Q9H7F0 1226 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 SUDS3Q9H7L9 328 aaPredicted RBP5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 PDFQ9HBH1 243 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 UBA2Q9UBT2 640 aaPredicted RBP5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 RWDD2AQ9UIY3 292 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 TP53TG5Q9Y2B4 290 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 ST14Q9Y5Y6 855 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 TACC2O95359 2948 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 CCDC168Q8NDH2 2452 aa5.79□□□□□ -1.48
HMGN1P36-201ENST00000446623 ZFHX3Q15911 3703 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 ESPL1Q14674 2120 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 PDZD2O15018 2839 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 WASH4PA8MWX3 477 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 A8MX80 341 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 J3KR12 359 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 K7EM74 188 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 SLITRK5O94991 958 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 AGFG2O95081 481 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 MMEP08473 750 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 TCN2P20062 427 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 NR1D1P20393 614 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 MMP8P22894 467 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 ADCY8P40145 1251 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 MTIF2P46199 727 aaKnown RBP5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 UQCRFS1P47985 274 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 CSNK1DP48730 415 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 POLR2LP62875 67 aaKnown RBP5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 MC2RQ01718 297 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 MC1RQ01726 317 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 ABHD18Q0P651 414 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 RAPGEF1Q13905 1077 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 ACOX1Q15067 660 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 STRADAQ7RTN6 431 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 KDELC2Q7Z4H8 507 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 SLFN11Q7Z7L1 901 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 SRLQ86TD4 932 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 HEATR4Q86WZ0 1026 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 NAGSQ8N159 534 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 TEX19Q8NA77 164 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 FAM172AQ8WUF8 416 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 SLC20A1Q8WUM9 679 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 ECHDC3Q96DC8 303 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 NUS1Q96E22 293 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 HRASLS5Q96KN8 279 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 COQ10AQ96MF6 247 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 MIPEPQ99797 713 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 DPYSL5Q9BPU6 564 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 DPH2Q9BQC3 489 aaPredicted RBP5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 C11orf70Q9BRQ4 267 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 EFHD1Q9BUP0 239 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 TEX101Q9BY14 249 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 FRMD8Q9BZ67 464 aaPredicted RBP5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 LRRC19Q9H756 370 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 PRDM8Q9NQV8 689 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 PHPT1Q9NRX4 125 aaPredicted RBP5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 PDP2Q9P2J9 529 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 SUFUQ9UMX1 484 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 SLC17A4Q9Y2C5 497 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 FHOD1Q9Y613 1164 aa5.78□□□□□ -1.48
HMGN1P36-201ENST00000446623 MED13Q9UHV7 2174 aa5.77□□□□□ -1.49
HMGN1P36-201ENST00000446623 SHANK1Q9Y566 2161 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms