RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 ITFG1Q8TB96 612 aa18.69■□□□□ 0.58
SEMA3D-202ENST00000444867 AGAP11Q8TF27 550 aa18.69■□□□□ 0.58
SEMA3D-202ENST00000444867 EEF1AKMT1Q8WVE0 214 aa18.69■□□□□ 0.58
SEMA3D-202ENST00000444867 PLEKHG4BQ96PX9 1271 aa18.69■□□□□ 0.58
SEMA3D-202ENST00000444867 HEPHQ9BQS7 1158 aa18.69■□□□□ 0.58
SEMA3D-202ENST00000444867 LMAN2LQ9H0V9 348 aa18.69■□□□□ 0.58
SEMA3D-202ENST00000444867 DUS2Q9NX74 493 aaKnown RBP18.69■□□□□ 0.58
SEMA3D-202ENST00000444867 RGSL1A5PLK6 1076 aa18.68■□□□□ 0.58
SEMA3D-202ENST00000444867 UBFD1O14562 309 aaKnown RBP18.68■□□□□ 0.58
SEMA3D-202ENST00000444867 ADH1CP00326 375 aa18.68■□□□□ 0.58
SEMA3D-202ENST00000444867 RGS4P49798 205 aa18.68■□□□□ 0.58
SEMA3D-202ENST00000444867 MLLT1Q03111 559 aaPredicted RBP18.68■□□□□ 0.58
SEMA3D-202ENST00000444867 CRY1Q16526 586 aa18.68■□□□□ 0.58
SEMA3D-202ENST00000444867 TMEM215Q68D42 235 aa18.68■□□□□ 0.58
SEMA3D-202ENST00000444867 GPSM1Q86YR5 675 aa18.68■□□□□ 0.58
SEMA3D-202ENST00000444867 SCUBE1Q8IWY4 988 aa18.68■□□□□ 0.58
SEMA3D-202ENST00000444867 CPNE9Q8IYJ1 553 aa18.68■□□□□ 0.58
SEMA3D-202ENST00000444867 NXPE1Q8N323 547 aa18.68■□□□□ 0.58
SEMA3D-202ENST00000444867 POU5F2Q8N7G0 328 aa18.68■□□□□ 0.58
SEMA3D-202ENST00000444867 RP9Q8TA86 221 aaKnown RBP18.68■□□□□ 0.58
SEMA3D-202ENST00000444867 OSCP1Q8WVF1 389 aa18.68■□□□□ 0.58
SEMA3D-202ENST00000444867 ULK4Q96C45 1275 aa18.68■□□□□ 0.58
SEMA3D-202ENST00000444867 MRGPRX3Q96LB0 322 aa18.68■□□□□ 0.58
SEMA3D-202ENST00000444867 PPP1R36Q96LQ0 422 aa18.68■□□□□ 0.58
SEMA3D-202ENST00000444867 BRD9Q9H8M2 597 aa18.68■□□□□ 0.58
SEMA3D-202ENST00000444867 NUDT4Q9NZJ9 180 aa18.68■□□□□ 0.58
SEMA3D-202ENST00000444867 IKZF3Q9UKT9 509 aa18.68■□□□□ 0.58
SEMA3D-202ENST00000444867 TSPAN11A1L157 253 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 GRXCR1A8MXD5 290 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 GPR39O43194 453 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 PEX11AO75192 247 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 CYP17A1P05093 508 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 RPS17P08708 135 aaKnown RBP18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 CHRM1P11229 460 aaPredicted RBP18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 CYP2A6P11509 494 aaPredicted RBP18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 ADH5P11766 374 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 ZNF30P17039 623 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 EEF1DP29692 281 aaKnown RBP18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 CBX2Q14781 532 aaPredicted RBP18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 DUSP6Q16828 381 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 C6orf163Q5TEZ5 329 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 CHSY3Q70JA7 882 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 NET1Q7Z628 596 aaPredicted RBP18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 ADGRD2Q7Z7M1 963 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 ADAMTSL2Q86TH1 951 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 RBM23Q86U06 439 aaKnown RBP18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 PELI3Q8N2H9 469 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 CHST14Q8NCH0 376 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 GPR26Q8NDV2 337 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 FRS2Q8WU20 508 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 LRIG1Q96JA1 1093 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 SFXN1Q9H9B4 322 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 RNPEPL1Q9HAU8 725 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 SARS2Q9NP81 518 aaKnown RBP18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 ZDHHC3Q9NYG2 299 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 C2orf16Q68DN1 1984 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 SNX2O60749 519 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 SKAP2O75563 359 aaPredicted RBP18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 CIB2O75838 187 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 CDK14O94921 469 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 SIX3O95343 332 aaPredicted RBP18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 CISD3P0C7P0 127 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 DGKGP49619 791 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 PTSQ03393 145 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 CLCQ05315 142 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 LCP2Q13094 533 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 GEN1Q17RS7 908 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 EML3Q32P44 896 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 RPS27LQ71UM5 84 aaKnown RBP18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 NAT16Q8N8M0 369 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 ENDOVQ8N8Q3 282 aaKnown RBP18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 HCAR2Q8TDS4 363 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 PBXIP1Q96AQ6 731 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 KLHL32Q96NJ5 620 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 CATSPER2Q96P56 530 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 LENG8Q96PV6 779 aaPredicted RBP18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 THTPAQ9BU02 230 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 CIPCQ9C0C6 399 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 TNFRSF12AQ9NP84 129 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 LATS2Q9NRM7 1088 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 KLHL42Q9P2K6 505 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 SLC27A6Q9Y2P4 619 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 FIS1Q9Y3D6 152 aa18.67■□□□□ 0.58
SEMA3D-202ENST00000444867 CEP290O15078 2479 aa18.66■□□□□ 0.58
SEMA3D-202ENST00000444867 AZIN1O14977 448 aa18.66■□□□□ 0.58
SEMA3D-202ENST00000444867 BMP1P13497 986 aa18.66■□□□□ 0.58
SEMA3D-202ENST00000444867 UGT1A6P19224 532 aa18.66■□□□□ 0.58
SEMA3D-202ENST00000444867 UGT1A1P22309 533 aa18.66■□□□□ 0.58
SEMA3D-202ENST00000444867 UGT1A4P22310 534 aa18.66■□□□□ 0.58
SEMA3D-202ENST00000444867 LHCGRP22888 699 aa18.66■□□□□ 0.58
SEMA3D-202ENST00000444867 DGKAP23743 735 aa18.66■□□□□ 0.58
SEMA3D-202ENST00000444867 UGT1A3P35503 534 aa18.66■□□□□ 0.58
SEMA3D-202ENST00000444867 UGT1A5P35504 534 aa18.66■□□□□ 0.58
SEMA3D-202ENST00000444867 NSG1P42857 185 aa18.66■□□□□ 0.58
SEMA3D-202ENST00000444867 CDH13P55290 713 aa18.66■□□□□ 0.58
SEMA3D-202ENST00000444867 CDC16Q13042 620 aa18.66■□□□□ 0.58
SEMA3D-202ENST00000444867 C9orf50Q5SZB4 431 aa18.66■□□□□ 0.58
SEMA3D-202ENST00000444867 ULK2Q8IYT8 1036 aa18.66■□□□□ 0.58
SEMA3D-202ENST00000444867 ZNF483Q8TF39 744 aaPredicted RBP18.66■□□□□ 0.58
SEMA3D-202ENST00000444867 FAM161BQ96MY7 647 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms