RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 NCAM2O15394 837 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 EGFRP00533 1210 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 CHRNA1P02708 482 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 ALOX12P18054 663 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 BMPR1AP36894 532 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 ATP4BP51164 291 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 TKTL1P51854 596 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 MAP3K7CLP57077 242 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 SIM2Q14190 667 aaPredicted RBP11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 TRIP4Q15650 581 aaPredicted RBP11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 PPP2R2DQ66LE6 453 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 SULT1C3Q6IMI6 304 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 TMEM207Q6UWW9 146 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 SPATC1Q76KD6 591 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 AFG1LQ8WV93 481 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 ESAMQ96AP7 390 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 C12orf42Q96LP6 360 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 TBCDQ9BTW9 1192 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.47□□□□□ -0.575e-10■■■■■ 41.7
HMGCS1-202ENST00000433297 KLK14Q9P0G3 267 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 LRRC37AA6NMS7 1700 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 MTSS1O43312 755 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 SPNP16150 400 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 CDKN2DP55273 166 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 PHC1P78364 1004 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 LAPTM4AQ15012 233 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 NBPF12Q5TAG4 269 aaPredicted RBP11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 TXNDC11Q6PKC3 985 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 ISCA2Q86U28 154 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 PTERQ96BW5 349 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 VMP1Q96GC9 406 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 GAD1Q99259 594 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 ACOX2Q99424 681 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 NPY6RQ99463 290 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 SMOC2Q9H3U7 446 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 SDR39U1Q9NRG7 319 aaPredicted RBP11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 FER1L6Q2WGJ9 1857 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 LOC100130705A0A1B0GUX0 176 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 A8MV72 311 aaPredicted RBP11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 H0Y626 953 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 SLC22A1O15245 554 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 SLC22A3O75751 556 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 TRIM16O95361 564 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 CLK1P49759 484 aaKnown RBP11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 HERVK_113P63132 956 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 SELPLGQ14242 412 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 DESI1Q6ICB0 168 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 ENPP6Q6UWR7 440 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 DTWD1Q8N5C7 304 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 FAM83FQ8NEG4 500 aaPredicted RBP11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 LILRB4Q8NHJ6 448 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 ATL1Q8WXF7 558 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 GPR20Q99678 358 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 C17orf80Q9BSJ5 609 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 ERVK-6Q9BXR3 956 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 REXO4Q9GZR2 422 aaKnown RBP11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 TKTL2Q9H0I9 626 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 DSN1Q9H410 356 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 WDCPQ9H6R7 721 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 IL37Q9NZH6 218 aa11.47□□□□□ -0.57
HMGCS1-202ENST00000433297 UPK1AO00322 258 aa11.46□□□□□ -0.57
HMGCS1-202ENST00000433297 ANGPTL1O95841 491 aa11.46□□□□□ -0.57
HMGCS1-202ENST00000433297 CYBBP04839 570 aa11.46□□□□□ -0.57
HMGCS1-202ENST00000433297 PGK2P07205 417 aa11.46□□□□□ -0.57
HMGCS1-202ENST00000433297 AKAP5P24588 427 aa11.46□□□□□ -0.57
HMGCS1-202ENST00000433297 NPTX1Q15818 432 aa11.46□□□□□ -0.57
HMGCS1-202ENST00000433297 GOLM1Q8NBJ4 401 aa11.46□□□□□ -0.57
HMGCS1-202ENST00000433297 FAR1Q8WVX9 515 aa11.46□□□□□ -0.57
HMGCS1-202ENST00000433297 ZHX1-C8orf76Q96EF9 292 aa11.46□□□□□ -0.57
HMGCS1-202ENST00000433297 HSFY1Q96LI6 401 aa11.46□□□□□ -0.57
HMGCS1-202ENST00000433297 TRMOQ9BU70 441 aa11.46□□□□□ -0.57
HMGCS1-202ENST00000433297 GOLGA2P5Q9HBQ8 144 aa11.46□□□□□ -0.57
HMGCS1-202ENST00000433297 CAB39Q9Y376 341 aaPredicted RBP11.46□□□□□ -0.57
HMGCS1-202ENST00000433297 BOLA1Q9Y3E2 137 aa11.46□□□□□ -0.57
HMGCS1-202ENST00000433297 SPO11Q9Y5K1 396 aa11.46□□□□□ -0.57
HMGCS1-202ENST00000433297 IGKV6-21A0A0C4DH24 114 aa11.46□□□□□ -0.58
HMGCS1-202ENST00000433297 ASPDHA6ND91 283 aa11.46□□□□□ -0.58
HMGCS1-202ENST00000433297 YJEFN3A6XGL0 299 aa11.46□□□□□ -0.58
HMGCS1-202ENST00000433297 GAS2O43903 313 aaKnown RBP11.46□□□□□ -0.58
HMGCS1-202ENST00000433297 KCNK2O95069 426 aa11.46□□□□□ -0.58
HMGCS1-202ENST00000433297 RAP2AP10114 183 aa11.46□□□□□ -0.58
HMGCS1-202ENST00000433297 POLR2JP52435 117 aaKnown RBP11.46□□□□□ -0.58
HMGCS1-202ENST00000433297 PPP5CP53041 499 aa11.46□□□□□ -0.58
HMGCS1-202ENST00000433297 PROSER1Q86XN7 944 aa11.46□□□□□ -0.58
HMGCS1-202ENST00000433297 SLC22A15Q8IZD6 547 aa11.46□□□□□ -0.58
HMGCS1-202ENST00000433297 ATP6V0D2Q8N8Y2 350 aa11.46□□□□□ -0.58
HMGCS1-202ENST00000433297 BPIFB1Q8TDL5 484 aa11.46□□□□□ -0.58
HMGCS1-202ENST00000433297 TSPAN17Q96FV3 270 aa11.46□□□□□ -0.58
HMGCS1-202ENST00000433297 AURKBQ96GD4 344 aaPredicted RBP11.46□□□□□ -0.58
HMGCS1-202ENST00000433297 RHNO1Q9BSD3 238 aa11.46□□□□□ -0.58
HMGCS1-202ENST00000433297 THUMPD3Q9BV44 507 aaKnown RBP11.46□□□□□ -0.58
HMGCS1-202ENST00000433297 ULBP1Q9BZM6 244 aa11.46□□□□□ -0.58
HMGCS1-202ENST00000433297 LEF1Q9UJU2 399 aaPredicted RBP11.46□□□□□ -0.58
HMGCS1-202ENST00000433297 SUPT3HB4E1H0 165 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 DBTP11182 482 aaKnown RBP11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 RACK1P63244 317 aaKnown RBP11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 SYT16Q17RD7 645 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 STEAP3Q658P3 488 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 LYSMD2Q8IV50 215 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 CNTN4Q8IWV2 1026 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms