RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 NSG1P42857 185 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 LEPRP48357 1165 aaKnown RBP7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 DHPSP49366 369 aaPredicted RBP7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 SERPINB9P50453 376 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 THOP1P52888 689 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 LIMK2P53671 638 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 SLC12A2P55011 1212 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 ITIH4Q14624 930 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 NFATC4Q14934 902 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 KHDC1Q4VXA5 237 aaKnown RBP7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 ZNF789Q5FWF6 425 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 WDR45BQ5MNZ6 344 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 ZNF648Q5T619 568 aaPredicted RBP7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 GRTP1Q5TC63 336 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 LYSMD4Q5XG99 296 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 CNSTQ6PJW8 725 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 KYAT3Q6YP21 454 aaKnown RBP7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 GALNT7Q86SF2 657 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 CROCCP2Q86T23 111 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 NLRP8Q86W28 1048 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 ZC3HC1Q86WB0 502 aaKnown RBP7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 SLC41A1Q8IVJ1 513 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 RGL4Q8IZJ4 473 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 IQCKQ8N0W5 287 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 RIBC1Q8N443 379 aaPredicted RBP7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 TMEM145Q8NBT3 493 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 NAT14Q8WUY8 206 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 HEXDCQ8WVB3 486 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 FUBP1Q96AE4 644 aaKnown RBP7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 CCDC97Q96F63 343 aaPredicted RBP7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 ELMO2Q96JJ3 720 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 DHRS4Q9BTZ2 278 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 TEX101Q9BY14 249 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 OR2AG1Q9H205 316 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 EBF2Q9HAK2 575 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 FETUBQ9UGM5 382 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 EIF2B4Q9UI10 523 aaKnown RBP7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 GNPTGQ9UJJ9 305 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 ZNF180Q9UJW8 692 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 SLC39A10Q9ULF5 831 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 TMEM98Q9Y2Y6 226 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 NFS1Q9Y697 457 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 MYLKQ15746 1914 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 ZDBF2Q9HCK1 2354 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 ATXN2Q99700 1313 aaKnown RBP7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 ANKRD36A6QL64 1941 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 IGLV3-16A0A075B6K0 115 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 IQANK1A0A1B0GTG1 560 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 FAM95CA0A1B0GW59 222 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 OR2AG2A6NM03 316 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 AGAP14A8MT82 685 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 C10orf142B7Z368 130 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 TRIM49D1C9J1S8 452 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 E5RI56 91 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 F8W8V4 182 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 RGS16O15492 202 aaPredicted RBP7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 GALR2O43603 387 aaPredicted RBP7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 VEGFDO43915 354 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 GPR37L1O60883 481 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 NIPSNAP2O75323 286 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 TCEA3O75764 348 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 SASH3O75995 380 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 RHOBTB1O94844 696 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 HAUS5O94927 633 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 AHSGP02765 367 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 ESR1P03372 595 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 ITGA2BP08514 1039 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 PKMP14618 531 aaKnown RBP7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 KRT15P19012 456 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 KELP23276 732 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 CNTFP26441 200 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 MAOBP27338 520 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 HTR1BP28222 390 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 GABRB3P28472 473 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 GCAP28676 217 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 PBLDP30039 288 aaPredicted RBP7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 RABIFP47224 123 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 SERPINB8P50452 374 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 KIAA1024LP59773 190 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 B4GALNT1Q00973 533 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 ILF2Q12905 390 aaKnown RBP7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 PDE1CQ14123 709 aaPredicted RBP7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 USP10Q14694 798 aaKnown RBP7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 ZNF528Q3MIS6 628 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 PLA2G4EQ3MJ16 856 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 RBM20Q5T481 1227 aaKnown RBP7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 LGSNQ5TDP6 509 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 MROH9Q5TGP6 573 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 PMS2CLQ68D20 193 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 CRTC3Q6UUV7 619 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 LAYNQ6UX15 382 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 PRR23BQ6ZRT6 265 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 Q6ZSR6 202 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 ADGRG6Q86SQ4 1221 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 TDRPQ86YL5 185 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 TRAPPC5Q8IUR0 188 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 DCLK2Q8N568 766 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 CLDN19Q8N6F1 224 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 RASGEF1AQ8N9B8 481 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 OR13H1Q8NG92 308 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms