RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 CCDC74BQ96LY2 380 aa17.66■□□□□ 0.42
CPNE1-210ENST00000416778 CCNL2Q96S94 520 aaPredicted RBP17.66■□□□□ 0.42
CPNE1-210ENST00000416778 SLC38A3Q99624 504 aa17.66■□□□□ 0.42
CPNE1-210ENST00000416778 HERPUD2Q9BSE4 406 aa17.66■□□□□ 0.42
CPNE1-210ENST00000416778 TRABDQ9H4I3 376 aa17.66■□□□□ 0.42
CPNE1-210ENST00000416778 C10orf88Q9H8K7 445 aa17.66■□□□□ 0.42
CPNE1-210ENST00000416778 BPIFA1Q9NP55 256 aa17.66■□□□□ 0.42
CPNE1-210ENST00000416778 LUC7LQ9NQ29 371 aaKnown RBP17.66■□□□□ 0.42
CPNE1-210ENST00000416778 PRDM8Q9NQV8 689 aa17.66■□□□□ 0.42
CPNE1-210ENST00000416778 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.66■□□□□ 0.42
CPNE1-210ENST00000416778 AKAP7Q9P0M2 348 aaPredicted RBP17.66■□□□□ 0.42
CPNE1-210ENST00000416778 TMEM9Q9P0T7 183 aa17.66■□□□□ 0.42
CPNE1-210ENST00000416778 TRHDEQ9UKU6 1024 aa17.66■□□□□ 0.42
CPNE1-210ENST00000416778 EFR3BQ9Y2G0 817 aa17.66■□□□□ 0.42
CPNE1-210ENST00000416778 BTNL10A8MVZ5 291 aa17.65■□□□□ 0.42
CPNE1-210ENST00000416778 GPR89AB7ZAQ6 455 aa17.65■□□□□ 0.42
CPNE1-210ENST00000416778 SNX2O60749 519 aa17.65■□□□□ 0.42
CPNE1-210ENST00000416778 GPR89BP0CG08 455 aa17.65■□□□□ 0.42
CPNE1-210ENST00000416778 F3P13726 295 aa17.65■□□□□ 0.42
CPNE1-210ENST00000416778 CSF2RBP32927 897 aa17.65■□□□□ 0.42
CPNE1-210ENST00000416778 COPS2P61201 443 aa17.65■□□□□ 0.42
CPNE1-210ENST00000416778 NOMO1Q15155 1222 aa17.65■□□□□ 0.42
CPNE1-210ENST00000416778 ZNF569Q5MCW4 686 aa17.65■□□□□ 0.42
CPNE1-210ENST00000416778 RAD9BQ6WBX8 426 aa17.65■□□□□ 0.42
CPNE1-210ENST00000416778 ZFAND4Q86XD8 727 aa17.65■□□□□ 0.42
CPNE1-210ENST00000416778 GAS2L3Q86XJ1 694 aa17.65■□□□□ 0.42
CPNE1-210ENST00000416778 DTX1Q86Y01 620 aa17.65■□□□□ 0.42
CPNE1-210ENST00000416778 CCDC50Q8IVM0 306 aa17.65■□□□□ 0.42
CPNE1-210ENST00000416778 DTX3LQ8TDB6 740 aa17.65■□□□□ 0.42
CPNE1-210ENST00000416778 QKIQ96PU8 341 aaKnown RBP eCLIP17.65■□□□□ 0.426e-7■■■□□ 15.2
CPNE1-210ENST00000416778 PLEKHG4BQ96PX9 1271 aa17.65■□□□□ 0.42
CPNE1-210ENST00000416778 LACRTQ9GZZ8 138 aa17.65■□□□□ 0.42
CPNE1-210ENST00000416778 IL26Q9NPH9 171 aa17.65■□□□□ 0.42
CPNE1-210ENST00000416778 KLC4Q9NSK0 619 aa17.65■□□□□ 0.42
CPNE1-210ENST00000416778 FOXJ2Q9P0K8 574 aa17.65■□□□□ 0.42
CPNE1-210ENST00000416778 KLHL8Q9P2G9 620 aaPredicted RBP17.65■□□□□ 0.42
CPNE1-210ENST00000416778 PRR19A6NJB7 356 aa17.64■□□□□ 0.41
CPNE1-210ENST00000416778 OR5K4A6NMS3 321 aa17.64■□□□□ 0.41
CPNE1-210ENST00000416778 APOC4-APOC2K7ER74 178 aa17.64■□□□□ 0.41
CPNE1-210ENST00000416778 ERVH48-1M5A8F1 160 aa17.64■□□□□ 0.41
CPNE1-210ENST00000416778 VEGFDO43915 354 aa17.64■□□□□ 0.41
CPNE1-210ENST00000416778 C1QL1O75973 258 aa17.64■□□□□ 0.41
CPNE1-210ENST00000416778 APOC2P02655 101 aa17.64■□□□□ 0.41
CPNE1-210ENST00000416778 THRAP10827 490 aa17.64■□□□□ 0.41
CPNE1-210ENST00000416778 XRCC1P18887 633 aaPredicted RBP17.64■□□□□ 0.41
CPNE1-210ENST00000416778 RBL1P28749 1068 aa17.64■□□□□ 0.41
CPNE1-210ENST00000416778 CTNNA1P35221 906 aaKnown RBP17.64■□□□□ 0.41
CPNE1-210ENST00000416778 CHRNA4P43681 627 aa17.64■□□□□ 0.41
CPNE1-210ENST00000416778 ARSDP51689 593 aa17.64■□□□□ 0.41
CPNE1-210ENST00000416778 HHEXQ03014 270 aa17.64■□□□□ 0.41
CPNE1-210ENST00000416778 NFATC2Q13469 925 aa17.64■□□□□ 0.41
CPNE1-210ENST00000416778 SLC1A5Q15758 541 aa17.64■□□□□ 0.41
CPNE1-210ENST00000416778 ATP13A5Q4VNC0 1218 aa17.64■□□□□ 0.41
CPNE1-210ENST00000416778 KHDC1Q4VXA5 237 aaKnown RBP17.64■□□□□ 0.41
CPNE1-210ENST00000416778 WDR74Q6RFH5 385 aaPredicted RBP17.64■□□□□ 0.41
CPNE1-210ENST00000416778 SLC9B2Q86UD5 537 aa17.64■□□□□ 0.41
CPNE1-210ENST00000416778 ZNF547Q8IVP9 402 aa17.64■□□□□ 0.41
CPNE1-210ENST00000416778 SLC25A41Q8N5S1 370 aa17.64■□□□□ 0.41
CPNE1-210ENST00000416778 TTC9Q92623 222 aa17.64■□□□□ 0.41
CPNE1-210ENST00000416778 SH3KBP1Q96B97 665 aa17.64■□□□□ 0.41
CPNE1-210ENST00000416778 VPS35Q96QK1 796 aa17.64■□□□□ 0.41
CPNE1-210ENST00000416778 TAAR9Q96RI9 348 aa17.64■□□□□ 0.41
CPNE1-210ENST00000416778 IL17CQ9P0M4 197 aa17.64■□□□□ 0.41
CPNE1-210ENST00000416778 SCHIP1Q9P0W5 487 aaPredicted RBP17.64■□□□□ 0.41
CPNE1-210ENST00000416778 CPNE7Q9UBL6 633 aa17.64■□□□□ 0.41
CPNE1-210ENST00000416778 KIR2DS5A0A0G2JLQ3 304 aa17.63■□□□□ 0.41
CPNE1-210ENST00000416778 A0A0G2JNG1 304 aa17.63■□□□□ 0.41
CPNE1-210ENST00000416778 F5H423 210 aaPredicted RBP17.63■□□□□ 0.41
CPNE1-210ENST00000416778 KIR2DS3K7RE56 304 aa17.63■□□□□ 0.41
CPNE1-210ENST00000416778 KMOO15229 486 aa17.63■□□□□ 0.41
CPNE1-210ENST00000416778 MTX2O75431 263 aa17.63■□□□□ 0.41
CPNE1-210ENST00000416778 CDK14O94921 469 aa17.63■□□□□ 0.41
CPNE1-210ENST00000416778 SLC4A1P02730 911 aa17.63■□□□□ 0.41
CPNE1-210ENST00000416778 LIPCP11150 499 aa17.63■□□□□ 0.41
CPNE1-210ENST00000416778 ZNF7P17097 686 aaPredicted RBP17.63■□□□□ 0.41
CPNE1-210ENST00000416778 TMEM115Q12893 351 aaPredicted RBP17.63■□□□□ 0.41
CPNE1-210ENST00000416778 MPP3Q13368 585 aa17.63■□□□□ 0.41
CPNE1-210ENST00000416778 KIR2DS5Q14953 304 aa17.63■□□□□ 0.41
CPNE1-210ENST00000416778 TMEM164Q5U3C3 297 aa17.63■□□□□ 0.41
CPNE1-210ENST00000416778 ARHGAP22Q7Z5H3 698 aa17.63■□□□□ 0.41
CPNE1-210ENST00000416778 AGBL5Q8NDL9 886 aa17.63■□□□□ 0.41
CPNE1-210ENST00000416778 OR10G6Q8NH81 332 aa17.63■□□□□ 0.41
CPNE1-210ENST00000416778 AHCYL2Q96HN2 611 aaKnown RBP17.63■□□□□ 0.41
CPNE1-210ENST00000416778 OCIAD1Q9NX40 245 aa17.63■□□□□ 0.41
CPNE1-210ENST00000416778 PCDHGA3Q9Y5H0 932 aa17.63■□□□□ 0.41
CPNE1-210ENST00000416778 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.62■□□□□ 0.41
CPNE1-210ENST00000416778 H7C0C1 242 aa17.62■□□□□ 0.41
CPNE1-210ENST00000416778 PJA2O43164 708 aa17.62■□□□□ 0.41
CPNE1-210ENST00000416778 UGT1A9O60656 530 aa17.62■□□□□ 0.41
CPNE1-210ENST00000416778 AGTP01019 485 aa17.62■□□□□ 0.41
CPNE1-210ENST00000416778 SLC2A4P14672 509 aa17.62■□□□□ 0.41
CPNE1-210ENST00000416778 UGT1A6P19224 532 aa17.62■□□□□ 0.41
CPNE1-210ENST00000416778 UGT1A1P22309 533 aa17.62■□□□□ 0.41
CPNE1-210ENST00000416778 UGT1A4P22310 534 aa17.62■□□□□ 0.41
CPNE1-210ENST00000416778 CTNNA2P26232 953 aa17.62■□□□□ 0.41
CPNE1-210ENST00000416778 CA5AP35218 305 aa17.62■□□□□ 0.41
CPNE1-210ENST00000416778 UGT1A3P35503 534 aa17.62■□□□□ 0.41
CPNE1-210ENST00000416778 ATP5OP48047 213 aa17.62■□□□□ 0.41
CPNE1-210ENST00000416778 UBE2IP63279 158 aaKnown RBP17.62■□□□□ 0.41
CPNE1-210ENST00000416778 SRSF6Q13247 344 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms