RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 BAG5Q9UL15 447 aa17.22■□□□□ 0.35
EWSR1-206ENST00000397938 PIN4Q9Y237 131 aaKnown RBP17.22■□□□□ 0.35
EWSR1-206ENST00000397938 PCDHB3Q9Y5E6 796 aa17.22■□□□□ 0.35
EWSR1-206ENST00000397938 OR51F1A6NGY5 319 aa17.22■□□□□ 0.35
EWSR1-206ENST00000397938 KDM1AO60341 852 aa17.22■□□□□ 0.35
EWSR1-206ENST00000397938 UGT2B11O75310 529 aa17.22■□□□□ 0.35
EWSR1-206ENST00000397938 RAP2AP10114 183 aa17.22■□□□□ 0.35
EWSR1-206ENST00000397938 DARSP14868 501 aaKnown RBP17.22■□□□□ 0.35
EWSR1-206ENST00000397938 POLR2JP52435 117 aaKnown RBP17.22■□□□□ 0.35
EWSR1-206ENST00000397938 ECT2LQ008S8 904 aa17.22■□□□□ 0.35
EWSR1-206ENST00000397938 CLCQ05315 142 aa17.22■□□□□ 0.35
EWSR1-206ENST00000397938 CTF1Q16619 201 aa17.22■□□□□ 0.35
EWSR1-206ENST00000397938 DPY19L1Q2PZI1 675 aa17.22■□□□□ 0.35
EWSR1-206ENST00000397938 ZNF549Q6P9A3 640 aa17.22■□□□□ 0.35
EWSR1-206ENST00000397938 ANKRD13BQ86YJ7 626 aa17.22■□□□□ 0.35
EWSR1-206ENST00000397938 EMID1Q96A84 441 aaPredicted RBP17.22■□□□□ 0.35
EWSR1-206ENST00000397938 PABPC5Q96DU9 382 aaKnown RBP17.22■□□□□ 0.35
EWSR1-206ENST00000397938 PDGFDQ9GZP0 370 aaPredicted RBP17.22■□□□□ 0.35
EWSR1-206ENST00000397938 CATSPERBQ9H7T0 1116 aa17.22■□□□□ 0.35
EWSR1-206ENST00000397938 FAM118AQ9NWS6 357 aa17.22■□□□□ 0.35
EWSR1-206ENST00000397938 DNMT3BQ9UBC3 853 aaKnown RBP17.22■□□□□ 0.35
EWSR1-206ENST00000397938 MTRRQ9UBK8 725 aa17.22■□□□□ 0.35
EWSR1-206ENST00000397938 MROH6A6NGR9 719 aa17.21■□□□□ 0.35
EWSR1-206ENST00000397938 ZNF37AP17032 561 aaPredicted RBP17.21■□□□□ 0.35
EWSR1-206ENST00000397938 ZNF362Q5T0B9 420 aaPredicted RBP17.21■□□□□ 0.35
EWSR1-206ENST00000397938 MANEALQ5VSG8 457 aa17.21■□□□□ 0.35
EWSR1-206ENST00000397938 AGAP7PQ5VUJ5 663 aa17.21■□□□□ 0.35
EWSR1-206ENST00000397938 LINC00299Q6ZSB3 139 aa17.21■□□□□ 0.35
EWSR1-206ENST00000397938 VMP1Q96GC9 406 aa17.21■□□□□ 0.35
EWSR1-206ENST00000397938 MBOAT4Q96T53 435 aa17.21■□□□□ 0.35
EWSR1-206ENST00000397938 MRPL42Q9Y6G3 142 aaKnown RBP17.21■□□□□ 0.35
EWSR1-206ENST00000397938 A0A0G2JLL6 359 aaPredicted RBP17.21■□□□□ 0.35
EWSR1-206ENST00000397938 XYLBO75191 536 aa17.21■□□□□ 0.35
EWSR1-206ENST00000397938 CRCPO75575 148 aa17.21■□□□□ 0.35
EWSR1-206ENST00000397938 DNAJB5O75953 348 aa17.21■□□□□ 0.35
EWSR1-206ENST00000397938 ITIH1P19827 911 aa17.21■□□□□ 0.35
EWSR1-206ENST00000397938 SUOXP51687 545 aa17.21■□□□□ 0.35
EWSR1-206ENST00000397938 PIGFQ07326 219 aa17.21■□□□□ 0.35
EWSR1-206ENST00000397938 PCBP1Q15365 356 aaKnown RBP eCLIP17.21■□□□□ 0.351e-9■□□□□ 9.6
EWSR1-206ENST00000397938 MEP1AQ16819 746 aa17.21■□□□□ 0.35
EWSR1-206ENST00000397938 PRRT2Q7Z6L0 340 aaPredicted RBP17.21■□□□□ 0.35
EWSR1-206ENST00000397938 DTWD1Q8N5C7 304 aa17.21■□□□□ 0.35
EWSR1-206ENST00000397938 S100ZQ8WXG8 99 aa17.21■□□□□ 0.35
EWSR1-206ENST00000397938 FEM1AQ9BSK4 669 aa17.21■□□□□ 0.35
EWSR1-206ENST00000397938 TSC22D4Q9Y3Q8 395 aa17.21■□□□□ 0.35
EWSR1-206ENST00000397938 TIMM22Q9Y584 194 aa17.21■□□□□ 0.35
EWSR1-206ENST00000397938 NPPAP01160 153 aa17.2■□□□□ 0.34
EWSR1-206ENST00000397938 IGLV3-25P01717 112 aa17.2■□□□□ 0.34
EWSR1-206ENST00000397938 TPD52P55327 224 aaPredicted RBP17.2■□□□□ 0.34
EWSR1-206ENST00000397938 IFITM3Q01628 133 aa17.2■□□□□ 0.34
EWSR1-206ENST00000397938 CTU2Q2VPK5 515 aaKnown RBP17.2■□□□□ 0.34
EWSR1-206ENST00000397938 XKR7Q5GH72 579 aa17.2■□□□□ 0.34
EWSR1-206ENST00000397938 ARTNQ5T4W7 220 aa17.2■□□□□ 0.34
EWSR1-206ENST00000397938 AFMIDQ63HM1 303 aa17.2■□□□□ 0.34
EWSR1-206ENST00000397938 HID1Q8IV36 788 aa17.2■□□□□ 0.34
EWSR1-206ENST00000397938 ARRDC4Q8NCT1 418 aa17.2■□□□□ 0.34
EWSR1-206ENST00000397938 IMP4Q96G21 291 aaKnown RBP17.2■□□□□ 0.34
EWSR1-206ENST00000397938 TFB2MQ9H5Q4 396 aaKnown RBP17.2■□□□□ 0.34
EWSR1-206ENST00000397938 SEMA4BQ9NPR2 832 aaPredicted RBP17.2■□□□□ 0.34
EWSR1-206ENST00000397938 OSER1Q9NX31 292 aa17.2■□□□□ 0.34
EWSR1-206ENST00000397938 PIM2Q9P1W9 311 aa17.2■□□□□ 0.34
EWSR1-206ENST00000397938 NAALAD2Q9Y3Q0 740 aa17.2■□□□□ 0.34
EWSR1-206ENST00000397938 PTCH2Q9Y6C5 1203 aa17.2■□□□□ 0.34
EWSR1-206ENST00000397938 OTOFQ9HC10 1997 aa17.2■□□□□ 0.34
EWSR1-206ENST00000397938 TBC1D4O60343 1298 aa17.2■□□□□ 0.34
EWSR1-206ENST00000397938 PCNAP12004 261 aa17.2■□□□□ 0.34
EWSR1-206ENST00000397938 ZNF24P17028 368 aa17.2■□□□□ 0.34
EWSR1-206ENST00000397938 TGM1P22735 817 aa17.2■□□□□ 0.34
EWSR1-206ENST00000397938 HTR7P34969 479 aa17.2■□□□□ 0.34
EWSR1-206ENST00000397938 MTHFRP42898 656 aa17.2■□□□□ 0.34
EWSR1-206ENST00000397938 GP2P55259 537 aaKnown RBP17.2■□□□□ 0.34
EWSR1-206ENST00000397938 EPS8Q12929 822 aa17.2■□□□□ 0.34
EWSR1-206ENST00000397938 FAM98BQ52LJ0 330 aaKnown RBP17.2■□□□□ 0.34
EWSR1-206ENST00000397938 UBXN11Q5T124 520 aa17.2■□□□□ 0.34
EWSR1-206ENST00000397938 IQSEC1Q6DN90 963 aa17.2■□□□□ 0.34
EWSR1-206ENST00000397938 ZDHHC13Q8IUH4 622 aa17.2■□□□□ 0.34
EWSR1-206ENST00000397938 ITFG1Q8TB96 612 aa17.2■□□□□ 0.34
EWSR1-206ENST00000397938 ZFP90Q8TF47 636 aa17.2■□□□□ 0.34
EWSR1-206ENST00000397938 ERLEC1Q96DZ1 483 aa17.2■□□□□ 0.34
EWSR1-206ENST00000397938 LTB4R2Q9NPC1 389 aa17.2■□□□□ 0.34
EWSR1-206ENST00000397938 SUN2Q9UH99 717 aa17.2■□□□□ 0.34
EWSR1-206ENST00000397938 FAM234BA2RU67 622 aa17.19■□□□□ 0.34
EWSR1-206ENST00000397938 PAGE1O75459 146 aa17.19■□□□□ 0.34
EWSR1-206ENST00000397938 ANXA6P08133 673 aa17.19■□□□□ 0.34
EWSR1-206ENST00000397938 IL12AP29459 219 aa17.19■□□□□ 0.34
EWSR1-206ENST00000397938 ADCYAP1R1P41586 468 aa17.19■□□□□ 0.34
EWSR1-206ENST00000397938 EIF4EBP2Q13542 120 aaPredicted RBP17.19■□□□□ 0.34
EWSR1-206ENST00000397938 SLCO6A1Q86UG4 719 aa17.19■□□□□ 0.34
EWSR1-206ENST00000397938 RALGPS2Q86X27 583 aaPredicted RBP17.19■□□□□ 0.34
EWSR1-206ENST00000397938 PIK3C3Q8NEB9 887 aa17.19■□□□□ 0.34
EWSR1-206ENST00000397938 PJA1Q8NG27 643 aa17.19■□□□□ 0.34
EWSR1-206ENST00000397938 STARD8Q92502 1023 aa17.19■□□□□ 0.34
EWSR1-206ENST00000397938 SDCCAG3Q96C92 435 aa17.19■□□□□ 0.34
EWSR1-206ENST00000397938 SENP8Q96LD8 212 aa17.19■□□□□ 0.34
EWSR1-206ENST00000397938 NUSAP1Q9BXS6 441 aaKnown RBP17.19■□□□□ 0.34
EWSR1-206ENST00000397938 AMBRA1Q9C0C7 1298 aa17.19■□□□□ 0.34
EWSR1-206ENST00000397938 TSPYL2Q9H2G4 693 aaPredicted RBP17.19■□□□□ 0.34
EWSR1-206ENST00000397938 ATP13A3Q9H7F0 1226 aa17.19■□□□□ 0.34
EWSR1-206ENST00000397938 POPDC3Q9HBV1 291 aa17.19■□□□□ 0.34
EWSR1-206ENST00000397938 ZIM2Q9NZV7 527 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms