RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 DBN1Q16643 649 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 TMEM259Q4ZIN3 620 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 ANO7Q6IWH7 933 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 DGLUCYQ7Z3D6 616 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 FAM124AQ86V42 546 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 EXOC3L1Q86VI1 746 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 NLRP8Q86W28 1048 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 SERPINA9Q86WD7 417 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 NXPE1Q8N323 547 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 PGBD3Q8N328 593 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 ACVR1CQ8NER5 493 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 AP2M1Q96CW1 435 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 SMOXQ9NWM0 555 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 CRLS1Q9UJA2 301 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 SDK1Q7Z5N4 2213 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 DCDC2BA2VCK2 349 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 C10orf142B7Z368 130 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 RNGTTO60942 597 aaKnown RBP16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 SOD1P00441 154 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 ACRV1P26436 265 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 ACSL1P33121 698 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 RPS21P63220 83 aaKnown RBP16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 DNAJC3Q13217 504 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 FGL2Q14314 439 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 ZNF284Q2VY69 593 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 RBM20Q5T481 1227 aaKnown RBP16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 RNF187Q5TA31 235 aaPredicted RBP16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 LYPLAL1Q5VWZ2 237 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 NEK5Q6P3R8 708 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 ZNF549Q6P9A3 640 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 TIFABQ6ZNK6 161 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 PELI3Q8N2H9 469 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 RLN3Q8WXF3 142 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 ISL2Q96A47 359 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 ULK4Q96C45 1275 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 LOXL4Q96JB6 756 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 SERAC1Q96JX3 654 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 VPS35Q96QK1 796 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 C1QTNF2Q9BXJ5 285 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 KCTD5Q9NXV2 234 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 CORO1CQ9ULV4 474 aaPredicted RBP16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 VPS9D1Q9Y2B5 631 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 CRYL1Q9Y2S2 319 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 TBC1D3DA0A087WVF3 549 aa16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 TBC1D3IA0A087WXS9 549 aa16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 TBC1D3EA0A087X179 549 aa16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 TBC1D3KA0A087X1G2 549 aa16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 FAM95CA0A1B0GW59 222 aa16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 A0A1W2PQU0 124 aa16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 TBC1D3FA6NER0 549 aaPredicted RBP16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 PRR5-ARHGAP8B1AHC4 643 aa16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 TBC1D3LB9A6J9 549 aa16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 OR1I1O60431 355 aa16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 NDUFS3O75489 264 aa16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 RFPL1O75677 317 aa16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 ALDOAP04075 364 aaKnown RBP16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 TBC1D3HP0C7X1 549 aa16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 PTGER3P43115 390 aa16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 MAGOHP61326 146 aaKnown RBP16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 PPP2CBP62714 309 aa16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 PPP2CAP67775 309 aa16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 ARHGAP8P85298 464 aa16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 ILF2Q12905 390 aaKnown RBP16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 MAP7D1Q3KQU3 841 aa16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 TBC1D3GQ6DHY5 549 aa16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 TBC1D3CQ6IPX1 549 aa16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 TCEAL6Q6IPX3 200 aa16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 SH2D5Q6ZV89 423 aa16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 HORMAD1Q86X24 394 aa16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 SRRM1Q8IYB3 904 aaKnown RBP16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 TBC1D3Q8IZP1 549 aaPredicted RBP16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 OR2T34Q8NGX1 318 aa16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 TCEAL3Q969E4 200 aa16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 CCDC97Q96F63 343 aaPredicted RBP16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 BTBD1Q9H0C5 482 aa16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 SGK2Q9HBY8 427 aa16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 ZDHHC3Q9NYG2 299 aa16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 MBD1Q9UIS9 605 aaPredicted RBP16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 ACTL7BQ9Y614 415 aa16.78■□□□□ 0.28
TSPAN4-205ENST00000397406 IGLV3-16A0A075B6K0 115 aa16.77■□□□□ 0.27
TSPAN4-205ENST00000397406 UBA6A0AVT1 1052 aaPredicted RBP16.77■□□□□ 0.27
TSPAN4-205ENST00000397406 K7ESM1 405 aa16.77■□□□□ 0.27
TSPAN4-205ENST00000397406 PFDN6O15212 129 aa16.77■□□□□ 0.27
TSPAN4-205ENST00000397406 MT-ND3P03897 115 aa16.77■□□□□ 0.27
TSPAN4-205ENST00000397406 ZNF806P0C7X5 589 aa16.77■□□□□ 0.27
TSPAN4-205ENST00000397406 CREB1P16220 341 aa16.77■□□□□ 0.27
TSPAN4-205ENST00000397406 PPARGP37231 505 aaPredicted RBP16.77■□□□□ 0.27
TSPAN4-205ENST00000397406 MAGEA12P43365 314 aa16.77■□□□□ 0.27
TSPAN4-205ENST00000397406 POLD2P49005 469 aa16.77■□□□□ 0.27
TSPAN4-205ENST00000397406 CSRP3P50461 194 aa16.77■□□□□ 0.27
TSPAN4-205ENST00000397406 ADARP55265 1226 aaKnown RBP16.77■□□□□ 0.27
TSPAN4-205ENST00000397406 ITIH4Q14624 930 aa16.77■□□□□ 0.27
TSPAN4-205ENST00000397406 WSCD2Q2TBF2 565 aa16.77■□□□□ 0.27
TSPAN4-205ENST00000397406 SETMARQ53H47 684 aaPredicted RBP16.77■□□□□ 0.27
TSPAN4-205ENST00000397406 BTN2A2Q8WVV5 523 aa16.77■□□□□ 0.27
TSPAN4-205ENST00000397406 BIRC8Q96P09 236 aa16.77■□□□□ 0.27
TSPAN4-205ENST00000397406 NDNQ99608 321 aa16.77■□□□□ 0.27
TSPAN4-205ENST00000397406 TTC1Q99614 292 aa16.77■□□□□ 0.27
TSPAN4-205ENST00000397406 AARSD1Q9BTE6 412 aaKnown RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms