RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 LYSMD3Q7Z3D4 306 aa16.64■□□□□ 0.25
NUP50-202ENST00000396096 SPATA19Q7Z5L4 167 aa16.64■□□□□ 0.25
NUP50-202ENST00000396096 GPSM1Q86YR5 675 aa16.64■□□□□ 0.25
NUP50-202ENST00000396096 DDIASQ8IXT1 998 aa16.64■□□□□ 0.25
NUP50-202ENST00000396096 ADCY4Q8NFM4 1077 aa16.64■□□□□ 0.25
NUP50-202ENST00000396096 TSPEARQ8WU66 669 aa16.64■□□□□ 0.25
NUP50-202ENST00000396096 LRGUKQ96M69 825 aa16.64■□□□□ 0.25
NUP50-202ENST00000396096 GPATCH1Q9BRR8 931 aaKnown RBP16.64■□□□□ 0.25
NUP50-202ENST00000396096 NUDT4Q9NZJ9 180 aa16.64■□□□□ 0.25
NUP50-202ENST00000396096 PDP2Q9P2J9 529 aa16.64■□□□□ 0.25
NUP50-202ENST00000396096 LSM7Q9UK45 103 aaKnown RBP16.64■□□□□ 0.25
NUP50-202ENST00000396096 PTGDR2Q9Y5Y4 395 aa16.64■□□□□ 0.25
NUP50-202ENST00000396096 CXorf51AA0A1B0GTR3 108 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 E5RI56 91 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 SOCS5O75159 536 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 MYCP01106 439 aaPredicted RBP16.63■□□□□ 0.25
NUP50-202ENST00000396096 UROSP10746 265 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 IDO1P14902 403 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 CHRM3P20309 590 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 SLC7A9P82251 487 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 CREMQ03060 361 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 KIF19Q2TAC6 998 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 EML3Q32P44 896 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 SYVN1Q86TM6 617 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 METTL3Q86U44 580 aaKnown RBP16.63■□□□□ 0.25
NUP50-202ENST00000396096 CPNE9Q8IYJ1 553 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 APCDD1Q8J025 514 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 ICA1LQ8NDH6 482 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 OR56A4Q8NGH8 313 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 AUTS2Q8WXX7 1259 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 TUBGCP3Q96CW5 907 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 SPDL1Q96EA4 605 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 PRORSD1PA6NEY8 169 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 K7ERQ8 282 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 GAPDHSO14556 408 aaPredicted RBP16.63■□□□□ 0.25
NUP50-202ENST00000396096 SCAMP3O14828 347 aaKnown RBP16.63■□□□□ 0.25
NUP50-202ENST00000396096 TEX28O15482 410 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 RNASEH1O60930 286 aaKnown RBP16.63■□□□□ 0.25
NUP50-202ENST00000396096 LINC00032P0C843 101 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 VCLP18206 1134 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 AGTR2P50052 363 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 MED21Q13503 144 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 GRAMD1BQ3KR37 738 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 IRAK1BP1Q5VVH5 260 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 PRMT9Q6P2P2 845 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 RETREG3Q86VR2 466 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 LILRA2Q8N149 483 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 FAM156AQ8NDB6 213 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 ZNF382Q96SR6 550 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 CCT7Q99832 543 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 HOPXQ9BPY8 73 aaPredicted RBP16.63■□□□□ 0.25
NUP50-202ENST00000396096 HGH1Q9BTY7 390 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 PFDN4Q9NQP4 134 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 ZNF225Q9UK10 706 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 GPR45Q9Y5Y3 372 aa16.63■□□□□ 0.25
NUP50-202ENST00000396096 TRBV5-4A0A0C4DH59 114 aa16.62■□□□□ 0.25
NUP50-202ENST00000396096 A0A0U1RQS6 177 aa16.62■□□□□ 0.25
NUP50-202ENST00000396096 E2F3O00716 465 aa16.62■□□□□ 0.25
NUP50-202ENST00000396096 SNX2O60749 519 aa16.62■□□□□ 0.25
NUP50-202ENST00000396096 CRCPO75575 148 aa16.62■□□□□ 0.25
NUP50-202ENST00000396096 TRBC1P01850 177 aa16.62■□□□□ 0.25
NUP50-202ENST00000396096 ALPIP09923 528 aa16.62■□□□□ 0.25
NUP50-202ENST00000396096 UBTFL6P0CB48 400 aaPredicted RBP16.62■□□□□ 0.25
NUP50-202ENST00000396096 HGFP14210 728 aa16.62■□□□□ 0.25
NUP50-202ENST00000396096 CTPS1P17812 591 aa16.62■□□□□ 0.25
NUP50-202ENST00000396096 DEFB103AP81534 67 aa16.62■□□□□ 0.25
NUP50-202ENST00000396096 RHDQ02161 417 aa16.62■□□□□ 0.25
NUP50-202ENST00000396096 CDKN3Q16667 212 aa16.62■□□□□ 0.25
NUP50-202ENST00000396096 SPATA24Q86W54 205 aa16.62■□□□□ 0.25
NUP50-202ENST00000396096 CAMK1DQ8IU85 385 aa16.62■□□□□ 0.25
NUP50-202ENST00000396096 TMEM102Q8N9M5 508 aaPredicted RBP16.62■□□□□ 0.25
NUP50-202ENST00000396096 SNX31Q8N9S9 440 aa16.62■□□□□ 0.25
NUP50-202ENST00000396096 DCUN1D1Q96GG9 259 aa16.62■□□□□ 0.25
NUP50-202ENST00000396096 LRRC3Q9BY71 257 aa16.62■□□□□ 0.25
NUP50-202ENST00000396096 SLC52A3Q9NQ40 469 aa16.62■□□□□ 0.25
NUP50-202ENST00000396096 TMEM45AQ9NWC5 275 aa16.62■□□□□ 0.25
NUP50-202ENST00000396096 MAP10Q9P2G4 905 aa16.62■□□□□ 0.25
NUP50-202ENST00000396096 ABCD2Q9UBJ2 740 aa16.62■□□□□ 0.25
NUP50-202ENST00000396096 GIMAP2Q9UG22 337 aa16.62■□□□□ 0.25
NUP50-202ENST00000396096 BTRCQ9Y297 605 aa16.62■□□□□ 0.25
NUP50-202ENST00000396096 TCRBV3S1A0A5B6 114 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 NR5A2O00482 541 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 SMAD6O43541 496 aaKnown RBP16.61■□□□□ 0.25
NUP50-202ENST00000396096 DENRO43583 198 aaKnown RBP16.61■□□□□ 0.25
NUP50-202ENST00000396096 CHEK2O96017 543 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 ZNF7P17097 686 aaPredicted RBP16.61■□□□□ 0.25
NUP50-202ENST00000396096 TCN1P20061 433 aaPredicted RBP16.61■□□□□ 0.25
NUP50-202ENST00000396096 GABRR2P28476 465 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 PPM1AP35813 382 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 BCL2L1Q07817 233 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 PCBP2Q15366 365 aaKnown RBP eCLIP16.61■□□□□ 0.256e-7■■■■■ 32.5
NUP50-202ENST00000396096 TGFBIQ15582 683 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 SPATS1Q496A3 300 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 MPPE1Q53F39 396 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 C6orf10Q5SRN2 563 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 BLOC1S3Q6QNY0 202 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 GAREM2Q75VX8 874 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 SNX20Q7Z614 316 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 ADAMTSL2Q86TH1 951 aa16.61■□□□□ 0.25
NUP50-202ENST00000396096 TMC8Q8IU68 726 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms