RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 CNDP1Q96KN2 507 aa17.19■□□□□ 0.34
THUMPD2-201ENST00000378727 TTC1Q99614 292 aa17.19■□□□□ 0.34
THUMPD2-201ENST00000378727 STN1Q9H668 368 aaKnown RBP17.19■□□□□ 0.34
THUMPD2-201ENST00000378727 COG4Q9H9E3 785 aa17.19■□□□□ 0.34
THUMPD2-201ENST00000378727 SARS2Q9NP81 518 aaKnown RBP17.19■□□□□ 0.34
THUMPD2-201ENST00000378727 CD84Q9UIB8 345 aa17.19■□□□□ 0.34
THUMPD2-201ENST00000378727 TMPRSS11EQ9UL52 423 aa17.19■□□□□ 0.34
THUMPD2-201ENST00000378727 DHRS7Q9Y394 339 aa17.19■□□□□ 0.34
THUMPD2-201ENST00000378727 CAPN7Q9Y6W3 813 aa17.19■□□□□ 0.34
THUMPD2-201ENST00000378727 PLXNA2O75051 1894 aa17.19■□□□□ 0.34
THUMPD2-201ENST00000378727 UBXN8O00124 270 aa17.19■□□□□ 0.34
THUMPD2-201ENST00000378727 KERAO60938 352 aa17.19■□□□□ 0.34
THUMPD2-201ENST00000378727 CBX6O95503 412 aa17.19■□□□□ 0.34
THUMPD2-201ENST00000378727 IMPDH1P20839 514 aa17.19■□□□□ 0.34
THUMPD2-201ENST00000378727 TARSP26639 723 aaKnown RBP17.19■□□□□ 0.34
THUMPD2-201ENST00000378727 IL2P60568 153 aa17.19■□□□□ 0.34
THUMPD2-201ENST00000378727 TSNQ15631 228 aaKnown RBP17.19■□□□□ 0.34
THUMPD2-201ENST00000378727 CFAP157Q5JU67 520 aa17.19■□□□□ 0.34
THUMPD2-201ENST00000378727 ZDHHC20Q5W0Z9 365 aa17.19■□□□□ 0.34
THUMPD2-201ENST00000378727 PTRHD1Q6GMV3 140 aaKnown RBP17.19■□□□□ 0.34
THUMPD2-201ENST00000378727 L3HYPDHQ96EM0 354 aa17.19■□□□□ 0.34
THUMPD2-201ENST00000378727 LINGO1Q96FE5 620 aa17.19■□□□□ 0.34
THUMPD2-201ENST00000378727 GNPTGQ9UJJ9 305 aa17.19■□□□□ 0.34
THUMPD2-201ENST00000378727 TRIM33Q9UPN9 1127 aa17.19■□□□□ 0.34
THUMPD2-201ENST00000378727 EDDM13A0A1B0GTR0 161 aa17.18■□□□□ 0.34
THUMPD2-201ENST00000378727 TBC1D3BA6NDS4 549 aa17.18■□□□□ 0.34
THUMPD2-201ENST00000378727 NPEPPSL1A6NEC2 478 aa17.18■□□□□ 0.34
THUMPD2-201ENST00000378727 MATN2O00339 956 aa17.18■□□□□ 0.34
THUMPD2-201ENST00000378727 KPNA3O00505 521 aaPredicted RBP17.18■□□□□ 0.34
THUMPD2-201ENST00000378727 HNRNPLP14866 589 aaKnown RBP eCLIP17.18■□□□□ 0.347e-10■■□□□ 12.4
THUMPD2-201ENST00000378727 GDI1P31150 447 aa17.18■□□□□ 0.34
THUMPD2-201ENST00000378727 LTBRP36941 435 aa17.18■□□□□ 0.34
THUMPD2-201ENST00000378727 SERPINB5P36952 375 aa17.18■□□□□ 0.34
THUMPD2-201ENST00000378727 EPGNQ6UW88 154 aa17.18■□□□□ 0.34
THUMPD2-201ENST00000378727 MACC1Q6ZN28 852 aa17.18■□□□□ 0.34
THUMPD2-201ENST00000378727 DPPA4Q7L190 304 aa17.18■□□□□ 0.34
THUMPD2-201ENST00000378727 STAG3L4Q8TBR4 150 aa17.18■□□□□ 0.34
THUMPD2-201ENST00000378727 FUBP1Q96AE4 644 aaKnown RBP17.18■□□□□ 0.34
THUMPD2-201ENST00000378727 RILPQ96NA2 401 aa17.18■□□□□ 0.34
THUMPD2-201ENST00000378727 ABCG8Q9H221 673 aa17.18■□□□□ 0.34
THUMPD2-201ENST00000378727 GSTO2Q9H4Y5 243 aa17.18■□□□□ 0.34
THUMPD2-201ENST00000378727 ZDHHC4Q9NPG8 344 aa17.18■□□□□ 0.34
THUMPD2-201ENST00000378727 PKD2L2Q9NZM6 624 aa17.18■□□□□ 0.34
THUMPD2-201ENST00000378727 ARMCX1Q9P291 453 aa17.18■□□□□ 0.34
THUMPD2-201ENST00000378727 PPM1HQ9ULR3 514 aa17.18■□□□□ 0.34
THUMPD2-201ENST00000378727 ARNTLO00327 626 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 GRID2O43424 1007 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 SMIM24O75264 130 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 TPBGLP0DKB5 382 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 ITGB6P18564 788 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 MMP12P39900 470 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 B4GALNT1Q00973 533 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 ZNF678Q5SXM1 525 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 FAM91A1Q658Y4 838 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 UGT3A1Q6NUS8 523 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 EP400NLQ6ZTU2 488 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 FRMD7Q6ZUT3 714 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 Q6ZVL8 140 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 SCAMP4Q969E2 229 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 FAM129BQ96TA1 746 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 SAR1AQ9NR31 198 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 ARL8BQ9NVJ2 186 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 CLDND1Q9NY35 253 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 ZDHHC3Q9NYG2 299 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 RNF112Q9ULX5 631 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 UNC80Q8N2C7 3258 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 IGLV3-16A0A075B6K0 115 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 BTN3A1O00481 513 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 SPINT1O43278 529 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 ECI2O75521 394 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 KAT7O95251 611 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 PRNPP04156 253 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 ETV3P41162 512 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 HERVK_113P63132 956 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 GRIN2CQ14957 1233 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 SLC9B1Q4ZJI4 515 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 UNC50Q53HI1 259 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 SERPINA13PQ6UXR4 307 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 ASRGL1Q7L266 308 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 PTGR2Q8N8N7 351 aaPredicted RBP17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 TMIEQ8NEW7 156 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 ARRDC3Q96B67 414 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 RIPOR3Q96MK2 946 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 ERVK-6Q9BXR3 956 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 TXLNGQ9NUQ3 528 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 ITM2BQ9Y287 266 aa17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.17■□□□□ 0.34
THUMPD2-201ENST00000378727 TNRC18O15417 2968 aaPredicted RBP17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 ANKRD12Q6UB98 2062 aa17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 TMEM233B4DJY2 109 aa17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 DIAPH2O60879 1101 aa17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 SLC25A14O95258 325 aaPredicted RBP17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 SERPINA6P08185 405 aa17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 XPAP23025 273 aaPredicted RBP17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 EIF2DP41214 584 aaKnown RBP17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 IL12RB1P42701 662 aa17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 ALDH18A1P54886 795 aaKnown RBP17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 DCDC1P59894 354 aa17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 ELAVL3Q14576 367 aaKnown RBP17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 PFKFB4Q16877 469 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms