RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 SFT2D3Q587I9 215 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 TXNDC5Q8NBS9 432 aaKnown RBP19.28■□□□□ 0.68
SSU72-204ENST00000378726 OR2A12Q8NGT7 310 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 SLC26A7Q8TE54 656 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 FGF13Q92913 245 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 ZNF641Q96N77 438 aaPredicted RBP19.28■□□□□ 0.68
SSU72-204ENST00000378726 FAM192AQ9GZU8 254 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 ILKAPQ9H0C8 392 aaPredicted RBP19.28■□□□□ 0.68
SSU72-204ENST00000378726 ALG9Q9H6U8 611 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 DNAJC28Q9NX36 388 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 ADAMTS6Q9UKP5 1117 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 MED16Q9Y2X0 877 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 EPOPA6NHQ4 379 aa19.27■□□□□ 0.68
SSU72-204ENST00000378726 RFXAPO00287 272 aa19.27■□□□□ 0.68
SSU72-204ENST00000378726 GPR39O43194 453 aa19.27■□□□□ 0.68
SSU72-204ENST00000378726 UGT2B4P06133 528 aa19.27■□□□□ 0.68
SSU72-204ENST00000378726 CHRNGP07510 517 aa19.27■□□□□ 0.68
SSU72-204ENST00000378726 CISD3P0C7P0 127 aa19.27■□□□□ 0.68
SSU72-204ENST00000378726 CD1DP15813 335 aa19.27■□□□□ 0.68
SSU72-204ENST00000378726 ZNF37AP17032 561 aaPredicted RBP19.27■□□□□ 0.68
SSU72-204ENST00000378726 NNMTP40261 264 aa19.27■□□□□ 0.68
SSU72-204ENST00000378726 RECQLP46063 649 aaPredicted RBP19.27■□□□□ 0.68
SSU72-204ENST00000378726 CCR10P46092 362 aa19.27■□□□□ 0.68
SSU72-204ENST00000378726 ARL13AQ5H913 290 aaPredicted RBP19.27■□□□□ 0.68
SSU72-204ENST00000378726 PGM2L1Q6PCE3 622 aa19.27■□□□□ 0.68
SSU72-204ENST00000378726 PAQR3Q6TCH7 311 aa19.27■□□□□ 0.68
SSU72-204ENST00000378726 FAM151BQ6UXP7 276 aa19.27■□□□□ 0.68
SSU72-204ENST00000378726 TSPAN33Q86UF1 283 aa19.27■□□□□ 0.68
SSU72-204ENST00000378726 CCNYL1Q8N7R7 359 aa19.27■□□□□ 0.68
SSU72-204ENST00000378726 ST13P5Q8NFI4 369 aaPredicted RBP19.27■□□□□ 0.68
SSU72-204ENST00000378726 BPIFB1Q8TDL5 484 aa19.27■□□□□ 0.68
SSU72-204ENST00000378726 ASB16Q96NS5 453 aa19.27■□□□□ 0.68
SSU72-204ENST00000378726 TRIM4Q9C037 500 aa19.27■□□□□ 0.68
SSU72-204ENST00000378726 SLC28A3Q9HAS3 691 aa19.27■□□□□ 0.68
SSU72-204ENST00000378726 SYTL2Q9HCH5 934 aa19.27■□□□□ 0.68
SSU72-204ENST00000378726 ZBTB14O43829 449 aa19.27■□□□□ 0.67
SSU72-204ENST00000378726 PTGER3P43115 390 aa19.27■□□□□ 0.67
SSU72-204ENST00000378726 DGKGP49619 791 aa19.27■□□□□ 0.67
SSU72-204ENST00000378726 DNAJB13P59910 316 aa19.27■□□□□ 0.67
SSU72-204ENST00000378726 SETMARQ53H47 684 aaPredicted RBP19.27■□□□□ 0.67
SSU72-204ENST00000378726 TCEAL5Q5H9L2 206 aa19.27■□□□□ 0.67
SSU72-204ENST00000378726 CRTC1Q6UUV9 634 aa19.27■□□□□ 0.67
SSU72-204ENST00000378726 SMARCD2Q92925 531 aa19.27■□□□□ 0.67
SSU72-204ENST00000378726 CCDC124Q96CT7 223 aaKnown RBP19.27■□□□□ 0.67
SSU72-204ENST00000378726 ZFYVE19Q96K21 471 aa19.27■□□□□ 0.67
SSU72-204ENST00000378726 MRGPRX3Q96LB0 322 aa19.27■□□□□ 0.67
SSU72-204ENST00000378726 LYSMD1Q96S90 227 aa19.27■□□□□ 0.67
SSU72-204ENST00000378726 CIPCQ9C0C6 399 aa19.27■□□□□ 0.67
SSU72-204ENST00000378726 POMKQ9H5K3 350 aa19.27■□□□□ 0.67
SSU72-204ENST00000378726 IL26Q9NPH9 171 aa19.27■□□□□ 0.67
SSU72-204ENST00000378726 CDH22Q9UJ99 828 aa19.27■□□□□ 0.67
SSU72-204ENST00000378726 PPIL1Q9Y3C6 166 aa19.27■□□□□ 0.67
SSU72-204ENST00000378726 LOC100653049A0A140TA62 436 aa19.26■□□□□ 0.67
SSU72-204ENST00000378726 NPIPB15A6NHN6 443 aaPredicted RBP19.26■□□□□ 0.67
SSU72-204ENST00000378726 TTC34A8MYJ7 566 aa19.26■□□□□ 0.67
SSU72-204ENST00000378726 KRT34O76011 436 aa19.26■□□□□ 0.67
SSU72-204ENST00000378726 ADH1CP00326 375 aa19.26■□□□□ 0.67
SSU72-204ENST00000378726 KCNA5P22460 613 aa19.26■□□□□ 0.67
SSU72-204ENST00000378726 TRIM67Q6ZTA4 783 aa19.26■□□□□ 0.67
SSU72-204ENST00000378726 TPRG1Q6ZUI0 275 aa19.26■□□□□ 0.67
SSU72-204ENST00000378726 PLPP6Q8IY26 295 aa19.26■□□□□ 0.67
SSU72-204ENST00000378726 PHTF2Q8N3S3 785 aa19.26■□□□□ 0.67
SSU72-204ENST00000378726 KIAA1958Q8N8K9 716 aa19.26■□□□□ 0.67
SSU72-204ENST00000378726 HIPK4Q8NE63 616 aa19.26■□□□□ 0.67
SSU72-204ENST00000378726 AGR3Q8TD06 166 aa19.26■□□□□ 0.67
SSU72-204ENST00000378726 ACTRT2Q8TDY3 377 aa19.26■□□□□ 0.67
SSU72-204ENST00000378726 CCDC126Q96EE4 140 aa19.26■□□□□ 0.67
SSU72-204ENST00000378726 ASIC4Q96FT7 647 aa19.26■□□□□ 0.67
SSU72-204ENST00000378726 GPR21Q99679 349 aa19.26■□□□□ 0.67
SSU72-204ENST00000378726 C19orf43Q9BQ61 176 aa19.26■□□□□ 0.67
SSU72-204ENST00000378726 CDH19Q9H159 772 aa19.26■□□□□ 0.67
SSU72-204ENST00000378726 ASB8Q9H765 288 aa19.26■□□□□ 0.67
SSU72-204ENST00000378726 GALPQ9UBC7 116 aa19.26■□□□□ 0.67
SSU72-204ENST00000378726 APPL1Q9UKG1 709 aa19.26■□□□□ 0.67
SSU72-204ENST00000378726 RAP2CQ9Y3L5 183 aa19.26■□□□□ 0.67
SSU72-204ENST00000378726 PRAMEF1O95521 474 aa19.25■□□□□ 0.67
SSU72-204ENST00000378726 PYGLP06737 847 aa19.25■□□□□ 0.67
SSU72-204ENST00000378726 BPIP17213 487 aa19.25■□□□□ 0.67
SSU72-204ENST00000378726 NCF2P19878 526 aaPredicted RBP19.25■□□□□ 0.67
SSU72-204ENST00000378726 ITGAXP20702 1163 aa19.25■□□□□ 0.67
SSU72-204ENST00000378726 BTKQ06187 659 aa19.25■□□□□ 0.67
SSU72-204ENST00000378726 GDPD4Q6W3E5 623 aa19.25■□□□□ 0.67
SSU72-204ENST00000378726 CERS6Q6ZMG9 384 aa19.25■□□□□ 0.67
SSU72-204ENST00000378726 FRS2Q8WU20 508 aa19.25■□□□□ 0.67
SSU72-204ENST00000378726 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.25■□□□□ 0.67
SSU72-204ENST00000378726 PTERQ96BW5 349 aa19.25■□□□□ 0.67
SSU72-204ENST00000378726 KLHL32Q96NJ5 620 aa19.25■□□□□ 0.67
SSU72-204ENST00000378726 CYP4F12Q9HCS2 524 aa19.25■□□□□ 0.67
SSU72-204ENST00000378726 NCKIPSDQ9NZQ3 722 aa19.25■□□□□ 0.67
SSU72-204ENST00000378726 A8MT66 165 aa19.25■□□□□ 0.67
SSU72-204ENST00000378726 WASH3PC4AMC7 463 aa19.25■□□□□ 0.67
SSU72-204ENST00000378726 GAPDHSO14556 408 aaPredicted RBP19.25■□□□□ 0.67
SSU72-204ENST00000378726 HOXC11O43248 304 aaPredicted RBP19.25■□□□□ 0.67
SSU72-204ENST00000378726 IPO13O94829 963 aaKnown RBP19.25■□□□□ 0.67
SSU72-204ENST00000378726 ARSAP15289 507 aa19.25■□□□□ 0.67
SSU72-204ENST00000378726 ALOX15P16050 662 aaPredicted RBP19.25■□□□□ 0.67
SSU72-204ENST00000378726 CHRM3P20309 590 aa19.25■□□□□ 0.67
SSU72-204ENST00000378726 CFAP157Q5JU67 520 aa19.25■□□□□ 0.67
SSU72-204ENST00000378726 CTSL3PQ5NE16 218 aa19.25■□□□□ 0.67
SSU72-204ENST00000378726 FRMD7Q6ZUT3 714 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms