RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 EXT2Q93063 718 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 ZNF707Q96C28 371 aaPredicted RBP10.6□□□□□ -0.71
TPM3-212ENST00000368533 MGME1Q9BQP7 344 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 CCDC28BQ9BUN5 200 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 RBM38Q9H0Z9 239 aaKnown RBP10.6□□□□□ -0.71
TPM3-212ENST00000368533 IRAK3Q9Y616 596 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 LDB2O43679 373 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 ZBTB14O43829 449 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 FKBP6O75344 327 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 SERPINB7O75635 380 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 PRLP01236 227 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 ARCN1P48444 511 aaKnown RBP10.6□□□□□ -0.71
TPM3-212ENST00000368533 CLCN2P51788 898 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 SLC7A9P82251 487 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 RELAQ04206 551 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 SEMA3AQ14563 771 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 DGKKQ5KSL6 1271 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 SNX32Q86XE0 403 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 GALNT4Q8N4A0 578 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 STN1Q9H668 368 aaKnown RBP10.6□□□□□ -0.71
TPM3-212ENST00000368533 SLC28A3Q9HAS3 691 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 SUN2Q9UH99 717 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 FBXO5Q9UKT4 447 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 HEATR9A2RTY3 570 aa10.59□□□□□ -0.71
TPM3-212ENST00000368533 CCDC162PA2VCL2 907 aa10.59□□□□□ -0.71
TPM3-212ENST00000368533 G3V2L1 256 aa10.59□□□□□ -0.71
TPM3-212ENST00000368533 GOT2P00505 430 aaKnown RBP10.59□□□□□ -0.71
TPM3-212ENST00000368533 CYBBP04839 570 aa10.59□□□□□ -0.71
TPM3-212ENST00000368533 ENO3P13929 434 aaPredicted RBP10.59□□□□□ -0.71
TPM3-212ENST00000368533 PLEKHG6Q3KR16 790 aa10.59□□□□□ -0.71
TPM3-212ENST00000368533 FUT11Q495W5 492 aa10.59□□□□□ -0.71
TPM3-212ENST00000368533 C5orf22Q49AR2 442 aa10.59□□□□□ -0.71
TPM3-212ENST00000368533 ARHGAP15Q53QZ3 475 aa10.59□□□□□ -0.71
TPM3-212ENST00000368533 FBXO48Q5FWF7 155 aa10.59□□□□□ -0.71
TPM3-212ENST00000368533 ARL13AQ5H913 290 aaPredicted RBP10.59□□□□□ -0.71
TPM3-212ENST00000368533 SEL1L3Q68CR1 1132 aa10.59□□□□□ -0.71
TPM3-212ENST00000368533 Q6ZVU0 165 aa10.59□□□□□ -0.71
TPM3-212ENST00000368533 RPS27LQ71UM5 84 aaKnown RBP10.59□□□□□ -0.71
TPM3-212ENST00000368533 CHST9Q7L1S5 443 aa10.59□□□□□ -0.71
TPM3-212ENST00000368533 ICA1LQ8NDH6 482 aa10.59□□□□□ -0.71
TPM3-212ENST00000368533 C1orf21Q9H246 121 aa10.59□□□□□ -0.71
TPM3-212ENST00000368533 CHD5Q8TDI0 1954 aa10.59□□□□□ -0.71
TPM3-212ENST00000368533 DENND4CQ5VZ89 1909 aa10.59□□□□□ -0.71
TPM3-212ENST00000368533 FAM95CA0A1B0GW59 222 aa10.59□□□□□ -0.71
TPM3-212ENST00000368533 MAGEB16A2A368 324 aa10.59□□□□□ -0.71
TPM3-212ENST00000368533 OTOL1A6NHN0 477 aaPredicted RBP10.59□□□□□ -0.71
TPM3-212ENST00000368533 PSMD3O43242 534 aa10.59□□□□□ -0.71
TPM3-212ENST00000368533 XYLBO75191 536 aa10.59□□□□□ -0.71
TPM3-212ENST00000368533 TCN1P20061 433 aaPredicted RBP10.59□□□□□ -0.71
TPM3-212ENST00000368533 ITGAXP20702 1163 aa10.59□□□□□ -0.71
TPM3-212ENST00000368533 C6orf52Q5T4I8 152 aa10.59□□□□□ -0.71
TPM3-212ENST00000368533 TMEM198Q66K66 360 aa10.59□□□□□ -0.71
TPM3-212ENST00000368533 HTR3DQ70Z44 454 aa10.59□□□□□ -0.71
TPM3-212ENST00000368533 ZC3HC1Q86WB0 502 aaKnown RBP10.59□□□□□ -0.71
TPM3-212ENST00000368533 ALG14Q96F25 216 aa10.59□□□□□ -0.71
TPM3-212ENST00000368533 ASIC4Q96FT7 647 aa10.59□□□□□ -0.71
TPM3-212ENST00000368533 CEP295NLQ96MC4 621 aa10.59□□□□□ -0.71
TPM3-212ENST00000368533 TDRD1Q9BXT4 1180 aaKnown RBP10.59□□□□□ -0.71
TPM3-212ENST00000368533 ZDHHC6Q9H6R6 413 aa10.59□□□□□ -0.71
TPM3-212ENST00000368533 GTSE1Q9NYZ3 720 aa10.59□□□□□ -0.71
TPM3-212ENST00000368533 LHX3Q9UBR4 397 aa10.59□□□□□ -0.71
TPM3-212ENST00000368533 POMPQ9Y244 141 aa10.59□□□□□ -0.71
TPM3-212ENST00000368533 OR51B4Q9Y5P0 310 aa10.59□□□□□ -0.71
TPM3-212ENST00000368533 ARSAP15289 507 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 CD1EP15812 388 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 PLK1P53350 603 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 PKNOX1P55347 436 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 SH3BGRP55822 239 aaPredicted RBP10.58□□□□□ -0.72
TPM3-212ENST00000368533 MYBPC1Q00872 1141 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 ATP1A4Q13733 1029 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 CCNIQ14094 377 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 MPPE1Q53F39 396 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 C12orf40Q86WS4 652 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 HEPHQ9BQS7 1158 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 PRKD2Q9BZL6 878 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 CYP4F12Q9HCS2 524 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 VPS45Q9NRW7 570 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 TREX1Q9NSU2 369 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 FKBPLQ9UIM3 349 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 ACOT9Q9Y305 439 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 MTCL1Q9Y4B5 1905 aaKnown RBP10.58□□□□□ -0.72
TPM3-212ENST00000368533 LOC285095A0A1B0GVY8 99 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 OXSR1O95747 527 aaPredicted RBP10.58□□□□□ -0.72
TPM3-212ENST00000368533 RPL10P27635 214 aaKnown RBP10.58□□□□□ -0.72
TPM3-212ENST00000368533 TAS2R39P59534 338 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 CSHL1Q14406 222 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 GEN1Q17RS7 908 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 PITRM1Q5JRX3 1037 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 OGFOD2Q6N063 350 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 EPGNQ6UW88 154 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 CHST14Q8NCH0 376 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 CLIP3Q96DZ5 547 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 DHRS1Q96LJ7 313 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 CDRT15Q96T59 188 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 OLFM1Q99784 485 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 C2orf49Q9BVC5 232 aaPredicted RBP10.58□□□□□ -0.72
TPM3-212ENST00000368533 TIMMDC1Q9NPL8 285 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 POLR3BQ9NW08 1133 aaPredicted RBP10.58□□□□□ -0.72
TPM3-212ENST00000368533 MID2Q9UJV3 735 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 FAM50BQ9Y247 325 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms