RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 KELP23276 732 aa10.97□□□□□ -0.65
ATXN3-201ENST00000340660 OTX2P32243 289 aa10.97□□□□□ -0.65
ATXN3-201ENST00000340660 CASP4P49662 377 aa10.97□□□□□ -0.65
ATXN3-201ENST00000340660 DNA2P51530 1060 aa10.97□□□□□ -0.65
ATXN3-201ENST00000340660 DAOAP59103 153 aa10.97□□□□□ -0.65
ATXN3-201ENST00000340660 PDE1BQ01064 536 aa10.97□□□□□ -0.65
ATXN3-201ENST00000340660 KRTAP1-1Q07627 177 aa10.97□□□□□ -0.65
ATXN3-201ENST00000340660 RUFY3Q7L099 469 aa10.97□□□□□ -0.65
ATXN3-201ENST00000340660 TTC7BQ86TV6 843 aa10.97□□□□□ -0.65
ATXN3-201ENST00000340660 PLXDC1Q8IUK5 500 aa10.97□□□□□ -0.65
ATXN3-201ENST00000340660 SFRP1Q8N474 314 aa10.97□□□□□ -0.65
ATXN3-201ENST00000340660 SLC38A9Q8NBW4 561 aa10.97□□□□□ -0.65
ATXN3-201ENST00000340660 DQX1Q8TE96 717 aaKnown RBP10.97□□□□□ -0.65
ATXN3-201ENST00000340660 NACC2Q96BF6 587 aa10.97□□□□□ -0.65
ATXN3-201ENST00000340660 OGFRQ9NZT2 677 aa10.97□□□□□ -0.65
ATXN3-201ENST00000340660 APEX2Q9UBZ4 518 aa10.97□□□□□ -0.65
ATXN3-201ENST00000340660 LUC7L2Q9Y383 392 aaKnown RBP10.97□□□□□ -0.65
ATXN3-201ENST00000340660 BUB1BO60566 1050 aaPredicted RBP10.96□□□□□ -0.65
ATXN3-201ENST00000340660 TOXO94900 526 aa10.96□□□□□ -0.65
ATXN3-201ENST00000340660 EML2O95834 649 aa10.96□□□□□ -0.65
ATXN3-201ENST00000340660 B3GALT4O96024 378 aa10.96□□□□□ -0.65
ATXN3-201ENST00000340660 HOXC4P09017 264 aaPredicted RBP10.96□□□□□ -0.65
ATXN3-201ENST00000340660 UNGP13051 313 aaPredicted RBP10.96□□□□□ -0.65
ATXN3-201ENST00000340660 P4HA1P13674 534 aa10.96□□□□□ -0.65
ATXN3-201ENST00000340660 TRIM21P19474 475 aaKnown RBP10.96□□□□□ -0.65
ATXN3-201ENST00000340660 GNPDA1P46926 289 aa10.96□□□□□ -0.65
ATXN3-201ENST00000340660 GUCY1B3Q02153 619 aa10.96□□□□□ -0.65
ATXN3-201ENST00000340660 BIRC3Q13489 604 aa10.96□□□□□ -0.65
ATXN3-201ENST00000340660 KEAP1Q14145 624 aa10.96□□□□□ -0.65
ATXN3-201ENST00000340660 NFKBIBQ15653 356 aa10.96□□□□□ -0.65
ATXN3-201ENST00000340660 TMEM52BQ4KMG9 183 aa10.96□□□□□ -0.65
ATXN3-201ENST00000340660 Q5PR19 223 aa10.96□□□□□ -0.65
ATXN3-201ENST00000340660 FBXL22Q6P050 247 aa10.96□□□□□ -0.65
ATXN3-201ENST00000340660 FAM198BQ6UWH4 519 aa10.96□□□□□ -0.65
ATXN3-201ENST00000340660 RAB43Q86YS6 212 aa10.96□□□□□ -0.65
ATXN3-201ENST00000340660 PCDH20Q8N6Y1 951 aaKnown RBP10.96□□□□□ -0.65
ATXN3-201ENST00000340660 PWWP2AQ96N64 755 aa10.96□□□□□ -0.65
ATXN3-201ENST00000340660 KLHL32Q96NJ5 620 aa10.96□□□□□ -0.65
ATXN3-201ENST00000340660 FCRL4Q96PJ5 515 aa10.96□□□□□ -0.65
ATXN3-201ENST00000340660 TBC1D10AQ9BXI6 508 aa10.96□□□□□ -0.65
ATXN3-201ENST00000340660 RNF32Q9H0A6 362 aa10.96□□□□□ -0.65
ATXN3-201ENST00000340660 TKTL2Q9H0I9 626 aa10.96□□□□□ -0.65
ATXN3-201ENST00000340660 LRRC4Q9HBW1 653 aa10.96□□□□□ -0.65
ATXN3-201ENST00000340660 NPHS2Q9NP85 383 aa10.96□□□□□ -0.65
ATXN3-201ENST00000340660 WASH6PQ9NQA3 447 aa10.96□□□□□ -0.65
ATXN3-201ENST00000340660 ADGRE2Q9UHX3 823 aa10.96□□□□□ -0.65
ATXN3-201ENST00000340660 RARRES3Q9UL19 164 aa10.96□□□□□ -0.65
ATXN3-201ENST00000340660 TBC1D30Q9Y2I9 924 aa10.96□□□□□ -0.65
ATXN3-201ENST00000340660 ZNF835Q9Y2P0 537 aa10.96□□□□□ -0.65
ATXN3-201ENST00000340660 TRIM64A6NGJ6 449 aa10.95□□□□□ -0.66
ATXN3-201ENST00000340660 TRIM64BA6NI03 449 aa10.95□□□□□ -0.66
ATXN3-201ENST00000340660 KIF1CO43896 1103 aaKnown RBP10.95□□□□□ -0.66
ATXN3-201ENST00000340660 CPNE3O75131 537 aaKnown RBP10.95□□□□□ -0.66
ATXN3-201ENST00000340660 NEFLP07196 543 aa10.95□□□□□ -0.66
ATXN3-201ENST00000340660 BRAFP15056 766 aa10.95□□□□□ -0.66
ATXN3-201ENST00000340660 FOLR1P15328 257 aa10.95□□□□□ -0.66
ATXN3-201ENST00000340660 TYRP1P17643 537 aa10.95□□□□□ -0.66
ATXN3-201ENST00000340660 PSMA5P28066 241 aa10.95□□□□□ -0.66
ATXN3-201ENST00000340660 PRPHP41219 470 aa10.95□□□□□ -0.66
ATXN3-201ENST00000340660 ACTR1BP42025 376 aa10.95□□□□□ -0.66
ATXN3-201ENST00000340660 TOB1P50616 345 aaPredicted RBP10.95□□□□□ -0.66
ATXN3-201ENST00000340660 ACTR1AP61163 376 aa10.95□□□□□ -0.66
ATXN3-201ENST00000340660 HHEXQ03014 270 aa10.95□□□□□ -0.66
ATXN3-201ENST00000340660 TUBB3Q13509 450 aa10.95□□□□□ -0.66
ATXN3-201ENST00000340660 POU4F3Q15319 338 aa10.95□□□□□ -0.66
ATXN3-201ENST00000340660 ZACNQ401N2 412 aa10.95□□□□□ -0.66
ATXN3-201ENST00000340660 ZC3H12AQ5D1E8 599 aaKnown RBP10.95□□□□□ -0.66
ATXN3-201ENST00000340660 PAOXQ6QHF9 649 aa10.95□□□□□ -0.66
ATXN3-201ENST00000340660 Q6ZPB1 254 aaPredicted RBP10.95□□□□□ -0.66
ATXN3-201ENST00000340660 SKAP1Q86WV1 359 aa10.95□□□□□ -0.66
ATXN3-201ENST00000340660 PELI3Q8N2H9 469 aa10.95□□□□□ -0.66
ATXN3-201ENST00000340660 OR1N1Q8NGS0 311 aa10.95□□□□□ -0.66
ATXN3-201ENST00000340660 PLEKHO2Q8TD55 490 aa10.95□□□□□ -0.66
ATXN3-201ENST00000340660 PHF10Q8WUB8 498 aaKnown RBP10.95□□□□□ -0.66
ATXN3-201ENST00000340660 RAD54LQ92698 747 aa10.95□□□□□ -0.66
ATXN3-201ENST00000340660 Q96MF0 132 aa10.95□□□□□ -0.66
ATXN3-201ENST00000340660 SERPINB11Q96P15 392 aa10.95□□□□□ -0.66
ATXN3-201ENST00000340660 TGM7Q96PF1 710 aa10.95□□□□□ -0.66
ATXN3-201ENST00000340660 SECISBP2Q96T21 854 aaKnown RBP10.95□□□□□ -0.66
ATXN3-201ENST00000340660 TM6SF2Q9BZW4 377 aa10.95□□□□□ -0.66
ATXN3-201ENST00000340660 UCK2Q9BZX2 261 aa10.95□□□□□ -0.66
ATXN3-201ENST00000340660 CEP44Q9C0F1 390 aa10.95□□□□□ -0.66
ATXN3-201ENST00000340660 ANLNQ9NQW6 1124 aa10.95□□□□□ -0.66
ATXN3-201ENST00000340660 ABI3Q9P2A4 366 aa10.95□□□□□ -0.66
ATXN3-201ENST00000340660 SUFUQ9UMX1 484 aa10.95□□□□□ -0.66
ATXN3-201ENST00000340660 ACTL7BQ9Y614 415 aa10.95□□□□□ -0.66
ATXN3-201ENST00000340660 ACTL7AQ9Y615 435 aa10.95□□□□□ -0.66
ATXN3-201ENST00000340660 A0A0D9SEW6 157 aa10.94□□□□□ -0.66
ATXN3-201ENST00000340660 TOX3O15405 576 aaPredicted RBP10.94□□□□□ -0.66
ATXN3-201ENST00000340660 PFKFB2O60825 505 aa10.94□□□□□ -0.66
ATXN3-201ENST00000340660 FYNP06241 537 aa10.94□□□□□ -0.66
ATXN3-201ENST00000340660 CEACAM5P06731 702 aa10.94□□□□□ -0.66
ATXN3-201ENST00000340660 TRIM23P36406 574 aa10.94□□□□□ -0.66
ATXN3-201ENST00000340660 ADCY8P40145 1251 aa10.94□□□□□ -0.66
ATXN3-201ENST00000340660 CXCR3P49682 368 aa10.94□□□□□ -0.66
ATXN3-201ENST00000340660 SERPINH1P50454 418 aaKnown RBP10.94□□□□□ -0.66
ATXN3-201ENST00000340660 RABGAP1LQ5R372 815 aa10.94□□□□□ -0.66
ATXN3-201ENST00000340660 TAC4Q86UU9 113 aa10.94□□□□□ -0.66
ATXN3-201ENST00000340660 ZZZ3Q8IYH5 903 aa10.94□□□□□ -0.66
ATXN3-201ENST00000340660 CPSF7Q8N684 471 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms