RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 ACP5P13686 325 aa14.05□□□□□ -0.16
RPP40-201ENST00000319533 OAS2P29728 719 aaKnown RBP14.05□□□□□ -0.16
RPP40-201ENST00000319533 STAT5AP42229 794 aa14.05□□□□□ -0.16
RPP40-201ENST00000319533 MC1RQ01726 317 aa14.05□□□□□ -0.16
RPP40-201ENST00000319533 SLC18A3Q16572 532 aa14.05□□□□□ -0.16
RPP40-201ENST00000319533 HADHQ16836 314 aaKnown RBP14.05□□□□□ -0.16
RPP40-201ENST00000319533 ANKRD20A8PQ5CZ79 823 aa14.05□□□□□ -0.16
RPP40-201ENST00000319533 PLXDC1Q8IUK5 500 aa14.05□□□□□ -0.16
RPP40-201ENST00000319533 LPCAT1Q8NF37 534 aa14.05□□□□□ -0.16
RPP40-201ENST00000319533 C9orf43Q8TAL5 461 aaPredicted RBP14.05□□□□□ -0.16
RPP40-201ENST00000319533 APOBEC4Q8WW27 367 aaKnown RBP14.05□□□□□ -0.16
RPP40-201ENST00000319533 CTNNBL1Q8WYA6 563 aaPredicted RBP14.05□□□□□ -0.16
RPP40-201ENST00000319533 MLPHQ9BV36 600 aaPredicted RBP14.05□□□□□ -0.16
RPP40-201ENST00000319533 ZMYND15Q9H091 742 aa14.05□□□□□ -0.16
RPP40-201ENST00000319533 PKD2L2Q9NZM6 624 aa14.05□□□□□ -0.16
RPP40-201ENST00000319533 OGFRQ9NZT2 677 aa14.05□□□□□ -0.16
RPP40-201ENST00000319533 ATXN10Q9UBB4 475 aa14.05□□□□□ -0.16
RPP40-201ENST00000319533 SPENQ96T58 3664 aaKnown RBP14.05□□□□□ -0.16
RPP40-201ENST00000319533 C1orf232A0A0U1RR37 186 aa14.04□□□□□ -0.16
RPP40-201ENST00000319533 PRR19A6NJB7 356 aa14.04□□□□□ -0.16
RPP40-201ENST00000319533 GPR89AB7ZAQ6 455 aa14.04□□□□□ -0.16
RPP40-201ENST00000319533 CHUKO15111 745 aa14.04□□□□□ -0.16
RPP40-201ENST00000319533 TOX3O15405 576 aaPredicted RBP14.04□□□□□ -0.16
RPP40-201ENST00000319533 H2AFZP0C0S5 128 aa14.04□□□□□ -0.16
RPP40-201ENST00000319533 GPR89BP0CG08 455 aa14.04□□□□□ -0.16
RPP40-201ENST00000319533 XRCC1P18887 633 aaPredicted RBP14.04□□□□□ -0.16
RPP40-201ENST00000319533 MX2P20592 715 aa14.04□□□□□ -0.16
RPP40-201ENST00000319533 SLC10A2Q12908 348 aaPredicted RBP14.04□□□□□ -0.16
RPP40-201ENST00000319533 UBAP2LQ14157 1087 aaKnown RBP14.04□□□□□ -0.16
RPP40-201ENST00000319533 PDK2Q15119 407 aa14.04□□□□□ -0.16
RPP40-201ENST00000319533 ATP13A4Q4VNC1 1196 aa14.04□□□□□ -0.16
RPP40-201ENST00000319533 H2AFVQ71UI9 128 aa14.04□□□□□ -0.16
RPP40-201ENST00000319533 UNC5BQ8IZJ1 945 aa14.04□□□□□ -0.16
RPP40-201ENST00000319533 ESX1Q8N693 406 aa14.04□□□□□ -0.16
RPP40-201ENST00000319533 PQLC3Q8N755 202 aa14.04□□□□□ -0.16
RPP40-201ENST00000319533 CCHCR1Q8TD31 782 aa14.04□□□□□ -0.16
RPP40-201ENST00000319533 STARD8Q92502 1023 aa14.04□□□□□ -0.16
RPP40-201ENST00000319533 EID2BQ96D98 161 aa14.04□□□□□ -0.16
RPP40-201ENST00000319533 HDAC11Q96DB2 347 aa14.04□□□□□ -0.16
RPP40-201ENST00000319533 ABHD17AQ96GS6 310 aa14.04□□□□□ -0.16
RPP40-201ENST00000319533 C9orf72Q96LT7 481 aa14.04□□□□□ -0.16
RPP40-201ENST00000319533 CCDC42Q96M95 316 aa14.04□□□□□ -0.16
RPP40-201ENST00000319533 PLEKHG4BQ96PX9 1271 aa14.04□□□□□ -0.16
RPP40-201ENST00000319533 TBC1D10AQ9BXI6 508 aa14.04□□□□□ -0.16
RPP40-201ENST00000319533 TRIM39Q9HCM9 518 aa14.04□□□□□ -0.16
RPP40-201ENST00000319533 CTTNBP2NLQ9P2B4 639 aa14.04□□□□□ -0.16
RPP40-201ENST00000319533 ANKMY1Q9P2S6 941 aa14.04□□□□□ -0.16
RPP40-201ENST00000319533 UVRAGQ9P2Y5 699 aa14.04□□□□□ -0.16
RPP40-201ENST00000319533 NFKBIL1Q9UBC1 381 aaPredicted RBP14.04□□□□□ -0.16
RPP40-201ENST00000319533 LCMT1Q9UIC8 334 aa14.04□□□□□ -0.16
RPP40-201ENST00000319533 NENFQ9UMX5 172 aa14.04□□□□□ -0.16
RPP40-201ENST00000319533 AKR1B15C9JRZ8 316 aaPredicted RBP14.03□□□□□ -0.16
RPP40-201ENST00000319533 SNX2O60749 519 aa14.03□□□□□ -0.16
RPP40-201ENST00000319533 PRKAR1AP10644 381 aa14.03□□□□□ -0.16
RPP40-201ENST00000319533 ZNF8P17098 575 aaPredicted RBP14.03□□□□□ -0.16
RPP40-201ENST00000319533 SSR1P43307 286 aaKnown RBP14.03□□□□□ -0.16
RPP40-201ENST00000319533 PPM1FP49593 454 aaPredicted RBP14.03□□□□□ -0.16
RPP40-201ENST00000319533 DCDC1P59894 354 aa14.03□□□□□ -0.16
RPP40-201ENST00000319533 GBE1Q04446 702 aa14.03□□□□□ -0.16
RPP40-201ENST00000319533 PDPK2PQ6A1A2 396 aa14.03□□□□□ -0.16
RPP40-201ENST00000319533 PHYKPLQ8IUZ5 450 aa14.03□□□□□ -0.16
RPP40-201ENST00000319533 CCDC13Q8IYE1 715 aa14.03□□□□□ -0.16
RPP40-201ENST00000319533 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.03□□□□□ -0.16
RPP40-201ENST00000319533 CNTD1Q8N815 330 aa14.03□□□□□ -0.16
RPP40-201ENST00000319533 KCTD6Q8NC69 237 aa14.03□□□□□ -0.16
RPP40-201ENST00000319533 TRIB3Q96RU7 358 aa14.03□□□□□ -0.16
RPP40-201ENST00000319533 PRDM8Q9NQV8 689 aa14.03□□□□□ -0.16
RPP40-201ENST00000319533 ZNF71Q9NQZ8 489 aaPredicted RBP14.03□□□□□ -0.16
RPP40-201ENST00000319533 DTLQ9NZJ0 730 aa14.03□□□□□ -0.16
RPP40-201ENST00000319533 SCHIP1Q9P0W5 487 aaPredicted RBP14.03□□□□□ -0.16
RPP40-201ENST00000319533 TTLL3Q9Y4R7 772 aa14.03□□□□□ -0.16
RPP40-201ENST00000319533 PROSCO94903 275 aa14.02□□□□□ -0.17
RPP40-201ENST00000319533 TCN2P20062 427 aa14.02□□□□□ -0.17
RPP40-201ENST00000319533 F8A1P23610 371 aa14.02□□□□□ -0.17
RPP40-201ENST00000319533 CD86P42081 329 aa14.02□□□□□ -0.17
RPP40-201ENST00000319533 MAPK9P45984 424 aa14.02□□□□□ -0.17
RPP40-201ENST00000319533 GFERP55789 205 aa14.02□□□□□ -0.17
RPP40-201ENST00000319533 IFI35P80217 286 aaPredicted RBP14.02□□□□□ -0.17
RPP40-201ENST00000319533 IGFBP7Q16270 282 aa14.02□□□□□ -0.17
RPP40-201ENST00000319533 DEFB109BQ30KR1 87 aa14.02□□□□□ -0.17
RPP40-201ENST00000319533 TMEM26Q6ZUK4 368 aa14.02□□□□□ -0.17
RPP40-201ENST00000319533 KDELC2Q7Z4H8 507 aa14.02□□□□□ -0.17
RPP40-201ENST00000319533 ADGRG6Q86SQ4 1221 aa14.02□□□□□ -0.17
RPP40-201ENST00000319533 CPNE8Q86YQ8 564 aa14.02□□□□□ -0.17
RPP40-201ENST00000319533 MAP7D3Q8IWC1 876 aa14.02□□□□□ -0.17
RPP40-201ENST00000319533 GPR26Q8NDV2 337 aa14.02□□□□□ -0.17
RPP40-201ENST00000319533 ZSCAN5AQ9BUG6 496 aa14.02□□□□□ -0.17
RPP40-201ENST00000319533 ADGRE3Q9BY15 652 aa14.02□□□□□ -0.17
RPP40-201ENST00000319533 ZNF768Q9H5H4 540 aaKnown RBP14.02□□□□□ -0.17
RPP40-201ENST00000319533 OCEL1Q9H607 264 aa14.02□□□□□ -0.17
RPP40-201ENST00000319533 NHEJ1Q9H9Q4 299 aaPredicted RBP14.02□□□□□ -0.17
RPP40-201ENST00000319533 ZFYVE1Q9HBF4 777 aa14.02□□□□□ -0.17
RPP40-201ENST00000319533 KLC4Q9NSK0 619 aa14.02□□□□□ -0.17
RPP40-201ENST00000319533 ZNF624Q9P2J8 865 aaPredicted RBP14.02□□□□□ -0.17
RPP40-201ENST00000319533 SLC23A2Q9UGH3 650 aa14.02□□□□□ -0.17
RPP40-201ENST00000319533 KLHL3Q9UH77 587 aa14.02□□□□□ -0.17
RPP40-201ENST00000319533 KCTD3Q9Y597 815 aa14.02□□□□□ -0.17
RPP40-201ENST00000319533 SLC30A1Q9Y6M5 507 aa14.02□□□□□ -0.17
RPP40-201ENST00000319533 RPS6KL1Q9Y6S9 549 aa14.02□□□□□ -0.17
RPP40-201ENST00000319533 USP9YO00507 2555 aaPredicted RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms