RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 A0A1W2PQF6 199 aa24.7■■□□□ 1.55
CDPF1-201ENST00000314567 SYNCRIPO60506 623 aaKnown RBP24.7■■□□□ 1.55
CDPF1-201ENST00000314567 SRP72O76094 671 aaKnown RBP24.7■■□□□ 1.55
CDPF1-201ENST00000314567 PRNPP04156 253 aa24.7■■□□□ 1.55
CDPF1-201ENST00000314567 HOXB2P14652 356 aa24.7■■□□□ 1.55
CDPF1-201ENST00000314567 ZNF37AP17032 561 aaPredicted RBP24.7■■□□□ 1.55
CDPF1-201ENST00000314567 SERPINB5P36952 375 aa24.7■■□□□ 1.55
CDPF1-201ENST00000314567 CAMK2GQ13555 558 aaPredicted RBP24.7■■□□□ 1.55
CDPF1-201ENST00000314567 RCN2Q14257 317 aa24.7■■□□□ 1.55
CDPF1-201ENST00000314567 CDKN3Q16667 212 aa24.7■■□□□ 1.55
CDPF1-201ENST00000314567 CLNKQ7Z7G1 428 aa24.7■■□□□ 1.55
CDPF1-201ENST00000314567 SIX5Q8N196 739 aa24.7■■□□□ 1.55
CDPF1-201ENST00000314567 SPATA6LQ8N4H0 392 aa24.7■■□□□ 1.55
CDPF1-201ENST00000314567 ANKRD49Q8WVL7 239 aa24.7■■□□□ 1.55
CDPF1-201ENST00000314567 GABRG3Q99928 467 aa24.7■■□□□ 1.55
CDPF1-201ENST00000314567 OSBPL1AQ9BXW6 950 aa24.7■■□□□ 1.55
CDPF1-201ENST00000314567 FOXQ1Q9C009 403 aa24.7■■□□□ 1.55
CDPF1-201ENST00000314567 ITM2BQ9Y287 266 aa24.7■■□□□ 1.55
CDPF1-201ENST00000314567 A0A0C4DFX4 3053 aa24.7■■□□□ 1.54
CDPF1-201ENST00000314567 RHOBTB1O94844 696 aa24.7■■□□□ 1.54
CDPF1-201ENST00000314567 UNC5CO95185 931 aa24.7■■□□□ 1.54
CDPF1-201ENST00000314567 CLDN7O95471 211 aa24.7■■□□□ 1.54
CDPF1-201ENST00000314567 LHCGRP22888 699 aa24.7■■□□□ 1.54
CDPF1-201ENST00000314567 TARSP26639 723 aaKnown RBP24.7■■□□□ 1.54
CDPF1-201ENST00000314567 SERPINB3P29508 390 aa24.7■■□□□ 1.54
CDPF1-201ENST00000314567 ARRB2P32121 409 aa24.7■■□□□ 1.54
CDPF1-201ENST00000314567 PPARGP37231 505 aaPredicted RBP24.7■■□□□ 1.54
CDPF1-201ENST00000314567 PTGER3P43115 390 aa24.7■■□□□ 1.54
CDPF1-201ENST00000314567 PTPN5P54829 565 aa24.7■■□□□ 1.54
CDPF1-201ENST00000314567 NCALDP61601 193 aa24.7■■□□□ 1.54
CDPF1-201ENST00000314567 TIAL1Q01085 375 aaKnown RBP eCLIP24.7■■□□□ 1.54
CDPF1-201ENST00000314567 FAM91A1Q658Y4 838 aa24.7■■□□□ 1.54
CDPF1-201ENST00000314567 TMEM207Q6UWW9 146 aa24.7■■□□□ 1.54
CDPF1-201ENST00000314567 USP45Q70EL2 814 aa24.7■■□□□ 1.54
CDPF1-201ENST00000314567 TTC7BQ86TV6 843 aa24.7■■□□□ 1.54
CDPF1-201ENST00000314567 PIM3Q86V86 326 aa24.7■■□□□ 1.54
CDPF1-201ENST00000314567 PIANPQ8IYJ0 282 aa24.7■■□□□ 1.54
CDPF1-201ENST00000314567 CBARPQ8N350 705 aaPredicted RBP24.7■■□□□ 1.54
CDPF1-201ENST00000314567 MKRN2Q9H000 416 aaKnown RBP24.7■■□□□ 1.54
CDPF1-201ENST00000314567 FNDC3AQ9Y2H6 1198 aaKnown RBP24.7■■□□□ 1.54
CDPF1-201ENST00000314567 F8W8V4 182 aa24.69■■□□□ 1.54
CDPF1-201ENST00000314567 NPHS1O60500 1241 aa24.69■■□□□ 1.54
CDPF1-201ENST00000314567 PYGLP06737 847 aa24.69■■□□□ 1.54
CDPF1-201ENST00000314567 PKMP14618 531 aaKnown RBP24.69■■□□□ 1.54
CDPF1-201ENST00000314567 BRAT1Q6PJG6 821 aa24.69■■□□□ 1.54
CDPF1-201ENST00000314567 CRTC1Q6UUV9 634 aa24.69■■□□□ 1.54
CDPF1-201ENST00000314567 PIWIL4Q7Z3Z4 852 aaKnown RBP24.69■■□□□ 1.54
CDPF1-201ENST00000314567 ZNF687Q8N1G0 1237 aa24.69■■□□□ 1.54
CDPF1-201ENST00000314567 TMIEQ8NEW7 156 aa24.69■■□□□ 1.54
CDPF1-201ENST00000314567 SCRN2Q96FV2 425 aa24.69■■□□□ 1.54
CDPF1-201ENST00000314567 MSANTD3Q96H12 275 aa24.69■■□□□ 1.54
CDPF1-201ENST00000314567 LRIG1Q96JA1 1093 aa24.69■■□□□ 1.54
CDPF1-201ENST00000314567 PCDH12Q9NPG4 1184 aa24.69■■□□□ 1.54
CDPF1-201ENST00000314567 DNAJC28Q9NX36 388 aa24.69■■□□□ 1.54
CDPF1-201ENST00000314567 B4GALT6Q9UBX8 382 aa24.69■■□□□ 1.54
CDPF1-201ENST00000314567 CFAP73A6NFT4 308 aa24.68■■□□□ 1.54
CDPF1-201ENST00000314567 H0YHG0 523 aa24.68■■□□□ 1.54
CDPF1-201ENST00000314567 NPC1O15118 1278 aa24.68■■□□□ 1.54
CDPF1-201ENST00000314567 CHRNB1P11230 501 aa24.68■■□□□ 1.54
CDPF1-201ENST00000314567 FMO4P31512 558 aa24.68■■□□□ 1.54
CDPF1-201ENST00000314567 COPAP53621 1224 aa24.68■■□□□ 1.54
CDPF1-201ENST00000314567 SATB1Q01826 763 aa24.68■■□□□ 1.54
CDPF1-201ENST00000314567 SDE2Q6IQ49 451 aa24.68■■□□□ 1.54
CDPF1-201ENST00000314567 SLC22A9Q8IVM8 553 aa24.68■■□□□ 1.54
CDPF1-201ENST00000314567 FLCNQ8NFG4 579 aa24.68■■□□□ 1.54
CDPF1-201ENST00000314567 MCCC1Q96RQ3 725 aaPredicted RBP24.68■■□□□ 1.54
CDPF1-201ENST00000314567 TTC1Q99614 292 aa24.68■■□□□ 1.54
CDPF1-201ENST00000314567 TUBB6Q9BUF5 446 aa24.68■■□□□ 1.54
CDPF1-201ENST00000314567 ILKAPQ9H0C8 392 aaPredicted RBP24.68■■□□□ 1.54
CDPF1-201ENST00000314567 HAO1Q9UJM8 370 aa24.68■■□□□ 1.54
CDPF1-201ENST00000314567 RAP2CQ9Y3L5 183 aa24.68■■□□□ 1.54
CDPF1-201ENST00000314567 TSPAN11A1L157 253 aa24.68■■□□□ 1.54
CDPF1-201ENST00000314567 MAN2B1O00754 1011 aa24.68■■□□□ 1.54
CDPF1-201ENST00000314567 MID1O15344 667 aa24.68■■□□□ 1.54
CDPF1-201ENST00000314567 ESR1P03372 595 aa24.68■■□□□ 1.54
CDPF1-201ENST00000314567 CD1DP15813 335 aa24.68■■□□□ 1.54
CDPF1-201ENST00000314567 TFEBP19484 476 aa24.68■■□□□ 1.54
CDPF1-201ENST00000314567 CDKN1CP49918 316 aaPredicted RBP24.68■■□□□ 1.54
CDPF1-201ENST00000314567 MRPS21P82921 87 aaKnown RBP24.68■■□□□ 1.54
CDPF1-201ENST00000314567 UBXN2BQ14CS0 331 aa24.68■■□□□ 1.54
CDPF1-201ENST00000314567 TMEM92Q6UXU6 159 aa24.68■■□□□ 1.54
CDPF1-201ENST00000314567 ATG14Q6ZNE5 492 aa24.68■■□□□ 1.54
CDPF1-201ENST00000314567 BIRC8Q96P09 236 aa24.68■■□□□ 1.54
CDPF1-201ENST00000314567 CDH19Q9H159 772 aa24.68■■□□□ 1.54
CDPF1-201ENST00000314567 RSPH9Q9H1X1 276 aaPredicted RBP24.68■■□□□ 1.54
CDPF1-201ENST00000314567 C2orf42Q9NWW7 574 aa24.68■■□□□ 1.54
CDPF1-201ENST00000314567 NCKIPSDQ9NZQ3 722 aa24.68■■□□□ 1.54
CDPF1-201ENST00000314567 WNT16Q9UBV4 365 aa24.68■■□□□ 1.54
CDPF1-201ENST00000314567 OAS3Q9Y6K5 1087 aaKnown RBP24.68■■□□□ 1.54
CDPF1-201ENST00000314567 UPK3BL1B0FP48 263 aa24.67■■□□□ 1.54
CDPF1-201ENST00000314567 UPK3BL2E5RIL1 263 aa24.67■■□□□ 1.54
CDPF1-201ENST00000314567 HNRNPCL1O60812 293 aaKnown RBP24.67■■□□□ 1.54
CDPF1-201ENST00000314567 CCDC22O60826 627 aa24.67■■□□□ 1.54
CDPF1-201ENST00000314567 VPS26AO75436 327 aa24.67■■□□□ 1.54
CDPF1-201ENST00000314567 ITGALP20701 1170 aa24.67■■□□□ 1.54
CDPF1-201ENST00000314567 NAGLUP54802 743 aa24.67■■□□□ 1.54
CDPF1-201ENST00000314567 HSF5Q4G112 596 aaPredicted RBP24.67■■□□□ 1.54
CDPF1-201ENST00000314567 LYPLAL1Q5VWZ2 237 aa24.67■■□□□ 1.54
CDPF1-201ENST00000314567 LRRC66Q68CR7 880 aa24.67■■□□□ 1.54
CDPF1-201ENST00000314567 RFLNAQ6ZTI6 216 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms