RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 UGT3A1Q6NUS8 523 aa17.79■□□□□ 0.44
CAPN1-201ENST00000279247 C22orf39Q6P5X5 142 aa17.79■□□□□ 0.44
CAPN1-201ENST00000279247 DET1Q7L5Y6 550 aa17.79■□□□□ 0.44
CAPN1-201ENST00000279247 FAM217AQ8IXS0 508 aa17.79■□□□□ 0.44
CAPN1-201ENST00000279247 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.79■□□□□ 0.44
CAPN1-201ENST00000279247 MMADHCQ9H3L0 296 aaPredicted RBP17.79■□□□□ 0.44
CAPN1-201ENST00000279247 CORO1CQ9ULV4 474 aaPredicted RBP17.79■□□□□ 0.44
CAPN1-201ENST00000279247 ZNF510Q9Y2H8 683 aa17.79■□□□□ 0.44
CAPN1-201ENST00000279247 LINC01553A4QN01 128 aa17.79■□□□□ 0.44
CAPN1-201ENST00000279247 RGSL1A5PLK6 1076 aa17.79■□□□□ 0.44
CAPN1-201ENST00000279247 UBDO15205 165 aa17.79■□□□□ 0.44
CAPN1-201ENST00000279247 THRAP10827 490 aa17.79■□□□□ 0.44
CAPN1-201ENST00000279247 CREB5Q02930 508 aa17.79■□□□□ 0.44
CAPN1-201ENST00000279247 ART3Q13508 389 aa17.79■□□□□ 0.44
CAPN1-201ENST00000279247 RBBP7Q16576 425 aa17.79■□□□□ 0.44
CAPN1-201ENST00000279247 LRRC36Q1X8D7 754 aa17.79■□□□□ 0.44
CAPN1-201ENST00000279247 TMC5Q6UXY8 1006 aa17.79■□□□□ 0.44
CAPN1-201ENST00000279247 KIRREL3Q8IZU9 778 aa17.79■□□□□ 0.44
CAPN1-201ENST00000279247 PCDH20Q8N6Y1 951 aaKnown RBP17.79■□□□□ 0.44
CAPN1-201ENST00000279247 PIDD1Q9HB75 910 aa17.79■□□□□ 0.44
CAPN1-201ENST00000279247 EIF2B4Q9UI10 523 aaKnown RBP17.79■□□□□ 0.44
CAPN1-201ENST00000279247 DNAJC15Q9Y5T4 150 aa17.79■□□□□ 0.44
CAPN1-201ENST00000279247 KERAO60938 352 aa17.78■□□□□ 0.44
CAPN1-201ENST00000279247 MTX2O75431 263 aa17.78■□□□□ 0.44
CAPN1-201ENST00000279247 CHRM1P11229 460 aaPredicted RBP17.78■□□□□ 0.44
CAPN1-201ENST00000279247 SUOXP51687 545 aa17.78■□□□□ 0.44
CAPN1-201ENST00000279247 CLCQ05315 142 aa17.78■□□□□ 0.44
CAPN1-201ENST00000279247 KIF19Q2TAC6 998 aa17.78■□□□□ 0.44
CAPN1-201ENST00000279247 ARHGAP15Q53QZ3 475 aa17.78■□□□□ 0.44
CAPN1-201ENST00000279247 AARS2Q5JTZ9 985 aaKnown RBP17.78■□□□□ 0.44
CAPN1-201ENST00000279247 ARMC3Q5W041 872 aa17.78■□□□□ 0.44
CAPN1-201ENST00000279247 FRA10AC1Q70Z53 315 aa17.78■□□□□ 0.44
CAPN1-201ENST00000279247 FAM156AQ8NDB6 213 aa17.78■□□□□ 0.44
CAPN1-201ENST00000279247 ZFYVE19Q96K21 471 aa17.78■□□□□ 0.44
CAPN1-201ENST00000279247 CDRT15Q96T59 188 aa17.78■□□□□ 0.44
CAPN1-201ENST00000279247 DERL2Q9GZP9 239 aa17.78■□□□□ 0.44
CAPN1-201ENST00000279247 TFB2MQ9H5Q4 396 aaKnown RBP17.78■□□□□ 0.44
CAPN1-201ENST00000279247 OAS3Q9Y6K5 1087 aaKnown RBP17.78■□□□□ 0.44
CAPN1-201ENST00000279247 GLYATL1P3A0A0U1RQE8 302 aa17.78■□□□□ 0.44
CAPN1-201ENST00000279247 PIP5K1BO14986 540 aa17.78■□□□□ 0.44
CAPN1-201ENST00000279247 PABPC1P11940 636 aaKnown RBP17.78■□□□□ 0.44
CAPN1-201ENST00000279247 SLC26A3P40879 764 aa17.78■□□□□ 0.44
CAPN1-201ENST00000279247 RAP1GDS1P52306 607 aa17.78■□□□□ 0.44
CAPN1-201ENST00000279247 HK3P52790 923 aa17.78■□□□□ 0.44
CAPN1-201ENST00000279247 NFATC2Q13469 925 aa17.78■□□□□ 0.44
CAPN1-201ENST00000279247 SHHQ15465 462 aa17.78■□□□□ 0.44
CAPN1-201ENST00000279247 MYLK3Q32MK0 819 aa17.78■□□□□ 0.44
CAPN1-201ENST00000279247 MMEL1Q495T6 779 aa17.78■□□□□ 0.44
CAPN1-201ENST00000279247 IRF7Q92985 503 aa17.78■□□□□ 0.44
CAPN1-201ENST00000279247 C19orf60Q96EN9 201 aa17.78■□□□□ 0.44
CAPN1-201ENST00000279247 SLC25A13Q9UJS0 675 aa17.78■□□□□ 0.44
CAPN1-201ENST00000279247 SLC25A14O95258 325 aaPredicted RBP17.77■□□□□ 0.44
CAPN1-201ENST00000279247 HOXB8P17481 243 aaPredicted RBP17.77■□□□□ 0.44
CAPN1-201ENST00000279247 ITGALP20701 1170 aa17.77■□□□□ 0.44
CAPN1-201ENST00000279247 PTGER3P43115 390 aa17.77■□□□□ 0.44
CAPN1-201ENST00000279247 CAMK1Q14012 370 aa17.77■□□□□ 0.44
CAPN1-201ENST00000279247 ZRSR2Q15696 482 aaKnown RBP17.77■□□□□ 0.44
CAPN1-201ENST00000279247 GPSM1Q86YR5 675 aa17.77■□□□□ 0.44
CAPN1-201ENST00000279247 DSELQ8IZU8 1212 aa17.77■□□□□ 0.44
CAPN1-201ENST00000279247 GPR26Q8NDV2 337 aa17.77■□□□□ 0.44
CAPN1-201ENST00000279247 SKA2Q8WVK7 121 aaPredicted RBP17.77■□□□□ 0.44
CAPN1-201ENST00000279247 ACOX2Q99424 681 aa17.77■□□□□ 0.44
CAPN1-201ENST00000279247 C1orf21Q9H246 121 aa17.77■□□□□ 0.44
CAPN1-201ENST00000279247 ZBTB26Q9HCK0 441 aa17.77■□□□□ 0.44
CAPN1-201ENST00000279247 VPS9D1Q9Y2B5 631 aa17.77■□□□□ 0.44
CAPN1-201ENST00000279247 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.77■□□□□ 0.44
CAPN1-201ENST00000279247 GAPDHSO14556 408 aaPredicted RBP17.77■□□□□ 0.44
CAPN1-201ENST00000279247 TSPAN12O95859 305 aa17.77■□□□□ 0.44
CAPN1-201ENST00000279247 CEBPBP17676 345 aa17.77■□□□□ 0.44
CAPN1-201ENST00000279247 TAF11Q15544 211 aa17.77■□□□□ 0.44
CAPN1-201ENST00000279247 PSRC1Q6PGN9 363 aaPredicted RBP17.77■□□□□ 0.44
CAPN1-201ENST00000279247 ADGRG2Q8IZP9 1017 aa17.77■□□□□ 0.44
CAPN1-201ENST00000279247 NKAPQ8N5F7 415 aaKnown RBP17.77■□□□□ 0.44
CAPN1-201ENST00000279247 TUBGCP3Q96CW5 907 aa17.77■□□□□ 0.44
CAPN1-201ENST00000279247 KLHL32Q96NJ5 620 aa17.77■□□□□ 0.44
CAPN1-201ENST00000279247 EBF2Q9HAK2 575 aa17.77■□□□□ 0.44
CAPN1-201ENST00000279247 CCDC85CA6NKD9 419 aa17.77■□□□□ 0.43
CAPN1-201ENST00000279247 HABP4Q5JVS0 413 aaKnown RBP17.77■□□□□ 0.43
CAPN1-201ENST00000279247 ANKS6Q68DC2 871 aa17.77■□□□□ 0.43
CAPN1-201ENST00000279247 PAOXQ6QHF9 649 aa17.77■□□□□ 0.43
CAPN1-201ENST00000279247 CRTC1Q6UUV9 634 aa17.77■□□□□ 0.43
CAPN1-201ENST00000279247 CYHR1Q6ZMK1 362 aa17.77■□□□□ 0.43
CAPN1-201ENST00000279247 KYQ8NBH2 561 aa17.77■□□□□ 0.43
CAPN1-201ENST00000279247 ITFG1Q8TB96 612 aa17.77■□□□□ 0.43
CAPN1-201ENST00000279247 TWIST2Q8WVJ9 160 aa17.77■□□□□ 0.43
CAPN1-201ENST00000279247 L3HYPDHQ96EM0 354 aa17.77■□□□□ 0.43
CAPN1-201ENST00000279247 SUV39H2Q9H5I1 410 aa17.77■□□□□ 0.43
CAPN1-201ENST00000279247 IL1RL2Q9HB29 575 aa17.77■□□□□ 0.43
CAPN1-201ENST00000279247 SPHK2Q9NRA0 654 aa17.77■□□□□ 0.43
CAPN1-201ENST00000279247 MRPS23Q9Y3D9 190 aaKnown RBP17.77■□□□□ 0.43
CAPN1-201ENST00000279247 AZIN1O14977 448 aa17.76■□□□□ 0.43
CAPN1-201ENST00000279247 KATNA1O75449 491 aa17.76■□□□□ 0.43
CAPN1-201ENST00000279247 VIPR2P41587 438 aa17.76■□□□□ 0.43
CAPN1-201ENST00000279247 FASTKQ14296 549 aaKnown RBP17.76■□□□□ 0.43
CAPN1-201ENST00000279247 MUM1Q2TAK8 710 aa17.76■□□□□ 0.43
CAPN1-201ENST00000279247 MPP7Q5T2T1 576 aa17.76■□□□□ 0.43
CAPN1-201ENST00000279247 PBXIP1Q96AQ6 731 aa17.76■□□□□ 0.43
CAPN1-201ENST00000279247 RTKNQ9BST9 563 aa17.76■□□□□ 0.43
CAPN1-201ENST00000279247 CCDC28BQ9BUN5 200 aa17.76■□□□□ 0.43
CAPN1-201ENST00000279247 AKTIPQ9H8T0 292 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms