RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 TTPAP49638 278 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 CLDN2P57739 230 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 TIAL1Q01085 375 aaKnown RBP eCLIP9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 SFSWAPQ12872 951 aaKnown RBP9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 ITGA9Q13797 1035 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 PDE1CQ14123 709 aaPredicted RBP9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 INPP5AQ14642 412 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 RASA2Q15283 850 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 HECTD2Q5U5R9 776 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 AGBL2Q5U5Z8 902 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 KIAA1161Q6NSJ0 714 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 PNCKQ6P2M8 343 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 NAPRTQ6XQN6 538 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 ZNF765Q7L2R6 523 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 PIM3Q86V86 326 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 KRT222Q8N1A0 295 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 RIBC1Q8N443 379 aaPredicted RBP9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 TMEM105Q8N8V8 129 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 BTN2A2Q8WVV5 523 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 GLYATL1Q969I3 302 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 CENPTQ96BT3 561 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 TCF12Q99081 682 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 GPR22Q99680 433 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 LGR4Q9BXB1 951 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 P2RY12Q9H244 342 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 C12orf65Q9H3J6 166 aaKnown RBP9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 PPCSQ9HAB8 311 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 SGK2Q9HBY8 427 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 INTS10Q9NVR2 710 aaKnown RBP9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 ZDHHC3Q9NYG2 299 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 NFKBIL1Q9UBC1 381 aaPredicted RBP9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 TMEM98Q9Y2Y6 226 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 OR1A2Q9Y585 309 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 POM121BA6NF01 834 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 H0Y8X5 98 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 AXIN1O15169 862 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 NIPSNAP2O75323 286 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 IGHV4-34P06331 123 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 BCKDHBP21953 392 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 AKT1P31749 480 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 HPDP32754 393 aaPredicted RBP9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 IGFALSP35858 605 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 PTGER3P43115 390 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 FNTBP49356 437 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 CCR3P51677 355 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 TAS2R39P59534 338 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 IRF9Q00978 393 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 DPTQ07507 201 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 USP10Q14694 798 aaKnown RBP9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 HSP90B2PQ58FF3 399 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 AARS2Q5JTZ9 985 aaKnown RBP9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 LGSNQ5TDP6 509 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 NEK5Q6P3R8 708 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 DOK6Q6PKX4 331 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 CERS6Q6ZMG9 384 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 SH2D5Q6ZV89 423 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 GALNT7Q86SF2 657 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 CROCCP2Q86T23 111 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 SPATA6LQ8N4H0 392 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 CAMKK1Q8N5S9 505 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 BEND7Q8N7W2 519 aaPredicted RBP9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 KNL1Q8NG31 2342 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 GABPB2Q8TAK5 448 aaPredicted RBP9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 LKAAEAR1Q8TD35 194 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 ULK4Q96C45 1275 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 SGF29Q96ES7 293 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 COPS8Q99627 209 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 SLC30A3Q99726 388 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 AARSD1Q9BTE6 412 aaKnown RBP9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 UNKQ9C0B0 810 aaKnown RBP9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 CDH19Q9H159 772 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 KDM4CQ9H3R0 1056 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 EPHX3Q9H6B9 360 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 SNX15Q9NRS6 342 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 FAM53CQ9NYF3 392 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 MED16Q9Y2X0 877 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 SLCO1B1Q9Y6L6 691 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 IGLV3-16A0A075B6K0 115 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 OR2AG2A6NM03 316 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 PRMT5O14744 637 aaPredicted RBP9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 ZNF217O75362 1048 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 PKMP14618 531 aaKnown RBP9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 ZNF7P17097 686 aaPredicted RBP9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 KRT4P19013 534 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 TYK2P29597 1187 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 POLD2P49005 469 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 CLCN5P51795 746 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 CTSCP53634 463 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 TMEM115Q12893 351 aaPredicted RBP9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 MPP2Q14168 576 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 AGERQ15109 404 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 KIAA0895LQ68EN5 471 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 TMEM207Q6UWW9 146 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 TAOK1Q7L7X3 1001 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 TRIM69Q86WT6 500 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 HEATR4Q86WZ0 1026 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 RAVER1Q8IY67 606 aaKnown RBP9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 MAML2Q8IZL2 1156 aaPredicted RBP9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 RBFAQ8N0V3 343 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms