RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 MAD2L2Q9UI95 211 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 NOCTQ9UK39 431 aaKnown RBP7.7□□□□□ -1.18
GPNMB-201ENST00000258733 MYRFQ9Y2G1 1151 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 GPR52Q9Y2T5 361 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 ADGRA3Q8IWK6 1321 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 A0A0A6YYK5 440 aaPredicted RBP7.7□□□□□ -1.18
GPNMB-201ENST00000258733 RNF225M0QZC1 329 aaPredicted RBP7.7□□□□□ -1.18
GPNMB-201ENST00000258733 ARVCFO00192 962 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 SCAMP2O15127 329 aaKnown RBP7.7□□□□□ -1.18
GPNMB-201ENST00000258733 TM7SF2O76062 418 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 RECQL4O94761 1208 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 HCKP08631 526 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 CD3GP09693 182 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 ARP10275 920 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 PSMC3P17980 439 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 CRABP1P29762 137 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 EPHA5P54756 1037 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 SLC12A3P55017 1021 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 ASIC1P78348 528 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 ZNF200P98182 395 aaPredicted RBP7.7□□□□□ -1.18
GPNMB-201ENST00000258733 SLC13A2Q13183 592 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 DYRK1AQ13627 763 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 CHRNA6Q15825 494 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 XKR4Q5GH76 650 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 LDLRAP1Q5SW96 308 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 LCN1P1Q5VSP4 162 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 NUDT13Q86X67 352 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 SMYD4Q8IYR2 804 aaPredicted RBP7.7□□□□□ -1.18
GPNMB-201ENST00000258733 MINDY1Q8N5J2 469 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 SLC25A41Q8N5S1 370 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 MTMR14Q8NCE2 650 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 ABHD11Q8NFV4 315 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 HM13Q8TCT9 377 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 MAP4K1Q92918 833 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 RILPL2Q969X0 211 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 LMF1Q96S06 567 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 MEIS3Q99687 375 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 TGIF2Q9GZN2 237 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 ADAM19Q9H013 955 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 CATSPERBQ9H7T0 1116 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 PDE7BQ9NP56 450 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 SARDHQ9UL12 918 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 PHTF1Q9UMS5 762 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 ZFP37Q9Y6Q3 630 aaPredicted RBP7.7□□□□□ -1.18
GPNMB-201ENST00000258733 MINK1Q8N4C8 1332 aaPredicted RBP7.7□□□□□ -1.18
GPNMB-201ENST00000258733 ZNF532Q9HCE3 1301 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 TECPR2O15040 1411 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 H3BNH8 94 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 AIM2O14862 343 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 NOBOXO60393 691 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 XYLBO75191 536 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 EIF3GO75821 320 aaKnown RBP eCLIP7.69□□□□□ -1.18
GPNMB-201ENST00000258733 ZBTB7AO95365 584 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 ZDHHC11BP0C7U3 371 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 MAPK4P31152 587 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 EPHX2P34913 555 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 SNAP25P60880 206 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 INCA1Q0VD86 236 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 STRN3Q13033 797 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 NME3Q13232 169 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 MTM1Q13496 603 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 PAGE2BQ5JRK9 111 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 VSTM1Q6UX27 236 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 DENND5BQ6ZUT9 1274 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 USP53Q70EK8 1073 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 CREB3L2Q70SY1 520 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 TRMT10CQ7L0Y3 403 aaKnown RBP7.69□□□□□ -1.18
GPNMB-201ENST00000258733 SIX6OS1Q8N1H7 587 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 OR2L5Q8NG80 312 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 PTERQ96BW5 349 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 TMCO6Q96DC7 493 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 C5orf34Q96MH7 638 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 FAM111AQ96PZ2 611 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 MAP3K3Q99759 626 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 TRIM51Q9BSJ1 452 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 MED18Q9BUE0 208 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 TM6SF1Q9BZW5 370 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 COPZ2Q9P299 210 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 TMPRSS11EQ9UL52 423 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 C19orf53Q9UNZ5 99 aaPredicted RBP7.69□□□□□ -1.18
GPNMB-201ENST00000258733 GPR55Q9Y2T6 319 aaPredicted RBP7.69□□□□□ -1.18
GPNMB-201ENST00000258733 AHDC1Q5TGY3 1603 aaPredicted RBP7.69□□□□□ -1.18
GPNMB-201ENST00000258733 WDR64B1ANS9 1081 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 B4E171 279 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 UTYO14607 1347 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 LRP6O75581 1613 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 SPAG6O75602 509 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 SLC22A5O76082 557 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 DEXIO95424 95 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 GH1P01241 217 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 IL7P13232 177 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 ALDH9A1P49189 494 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 PMS1P54277 932 aaKnown RBP7.69□□□□□ -1.18
GPNMB-201ENST00000258733 RAD23AP54725 363 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 ATP2C1P98194 919 aaPredicted RBP7.69□□□□□ -1.18
GPNMB-201ENST00000258733 BST2Q10589 180 aaKnown RBP7.69□□□□□ -1.18
GPNMB-201ENST00000258733 ILF2Q12905 390 aaKnown RBP7.69□□□□□ -1.18
GPNMB-201ENST00000258733 PNOCQ13519 176 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 DUOXA2Q1HG44 320 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 FLYWCH1Q4VC44 716 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms