RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 ABI1Q8IZP0 508 aa25.34■■□□□ 1.65
RAB40C-201ENST00000248139 ANKFN1Q8N957 763 aa25.34■■□□□ 1.65
RAB40C-201ENST00000248139 RMND5BQ96G75 393 aaPredicted RBP25.34■■□□□ 1.65
RAB40C-201ENST00000248139 PLEKHG4BQ96PX9 1271 aa25.34■■□□□ 1.65
RAB40C-201ENST00000248139 PSKH2Q96QS6 385 aa25.34■■□□□ 1.65
RAB40C-201ENST00000248139 SEPHS2Q99611 448 aa25.34■■□□□ 1.65
RAB40C-201ENST00000248139 MYRFQ9Y2G1 1151 aa25.34■■□□□ 1.65
RAB40C-201ENST00000248139 PCDHA9Q9Y5H5 950 aa25.34■■□□□ 1.65
RAB40C-201ENST00000248139 TSPAN12O95859 305 aa25.33■■□□□ 1.65
RAB40C-201ENST00000248139 BMP2P12643 396 aa25.33■■□□□ 1.65
RAB40C-201ENST00000248139 CDH2P19022 906 aaPredicted RBP25.33■■□□□ 1.65
RAB40C-201ENST00000248139 ACLYP53396 1101 aa25.33■■□□□ 1.65
RAB40C-201ENST00000248139 MRPL58Q14197 206 aaKnown RBP25.33■■□□□ 1.65
RAB40C-201ENST00000248139 ADGRG5Q8IZF4 528 aa25.33■■□□□ 1.65
RAB40C-201ENST00000248139 ZNF786Q8N393 782 aa25.33■■□□□ 1.65
RAB40C-201ENST00000248139 TMEM125Q96AQ2 219 aa25.33■■□□□ 1.65
RAB40C-201ENST00000248139 ASB2Q96Q27 587 aa25.33■■□□□ 1.65
RAB40C-201ENST00000248139 MARCH5Q9NX47 278 aa25.33■■□□□ 1.65
RAB40C-201ENST00000248139 CD274Q9NZQ7 290 aa25.33■■□□□ 1.65
RAB40C-201ENST00000248139 PCTPQ9UKL6 214 aa25.33■■□□□ 1.65
RAB40C-201ENST00000248139 OAS3Q9Y6K5 1087 aaKnown RBP25.33■■□□□ 1.65
RAB40C-201ENST00000248139 TANC1Q9C0D5 1861 aa25.33■■□□□ 1.65
RAB40C-201ENST00000248139 TMEM88BA6NKF7 163 aa25.33■■□□□ 1.65
RAB40C-201ENST00000248139 TMEM189-UBE2V1I3L0A0 370 aa25.33■■□□□ 1.65
RAB40C-201ENST00000248139 SNAP91O60641 907 aa25.33■■□□□ 1.65
RAB40C-201ENST00000248139 RPS17P08708 135 aaKnown RBP25.33■■□□□ 1.65
RAB40C-201ENST00000248139 ITGB6P18564 788 aa25.33■■□□□ 1.65
RAB40C-201ENST00000248139 SLC11A1P49279 550 aa25.33■■□□□ 1.65
RAB40C-201ENST00000248139 ATP6V0D1P61421 351 aa25.33■■□□□ 1.65
RAB40C-201ENST00000248139 RALGPS2Q86X27 583 aaPredicted RBP25.33■■□□□ 1.65
RAB40C-201ENST00000248139 KIAA2013Q8IYS2 634 aa25.33■■□□□ 1.65
RAB40C-201ENST00000248139 OFCC1Q8IZS5 231 aa25.33■■□□□ 1.65
RAB40C-201ENST00000248139 TFAP2CQ92754 450 aa25.33■■□□□ 1.65
RAB40C-201ENST00000248139 FBXL20Q96IG2 436 aa25.33■■□□□ 1.65
RAB40C-201ENST00000248139 ZNF599Q96NL3 588 aa25.33■■□□□ 1.65
RAB40C-201ENST00000248139 INTS10Q9NVR2 710 aaKnown RBP25.33■■□□□ 1.65
RAB40C-201ENST00000248139 RAI2Q9Y5P3 530 aa25.33■■□□□ 1.65
RAB40C-201ENST00000248139 H3BNC9 293 aa25.32■■□□□ 1.64
RAB40C-201ENST00000248139 SYN3O14994 580 aa25.32■■□□□ 1.64
RAB40C-201ENST00000248139 IDO1P14902 403 aa25.32■■□□□ 1.64
RAB40C-201ENST00000248139 LIPEQ05469 1076 aa25.32■■□□□ 1.64
RAB40C-201ENST00000248139 LAMB3Q13751 1172 aa25.32■■□□□ 1.64
RAB40C-201ENST00000248139 TAS2R42Q7RTR8 314 aa25.32■■□□□ 1.64
RAB40C-201ENST00000248139 TDRD1Q9BXT4 1180 aaKnown RBP25.32■■□□□ 1.64
RAB40C-201ENST00000248139 ALG2Q9H553 416 aa25.32■■□□□ 1.64
RAB40C-201ENST00000248139 EVLQ9UI08 416 aaPredicted RBP25.32■■□□□ 1.64
RAB40C-201ENST00000248139 SLC38A8A6NNN8 435 aa25.32■■□□□ 1.64
RAB40C-201ENST00000248139 HTR6P50406 440 aa25.32■■□□□ 1.64
RAB40C-201ENST00000248139 KCNK10P57789 538 aa25.32■■□□□ 1.64
RAB40C-201ENST00000248139 SLC2A7Q6PXP3 512 aa25.32■■□□□ 1.64
RAB40C-201ENST00000248139 AFTPHQ6ULP2 937 aa25.32■■□□□ 1.64
RAB40C-201ENST00000248139 DDI1Q8WTU0 396 aa25.32■■□□□ 1.64
RAB40C-201ENST00000248139 CYGBQ8WWM9 190 aa25.32■■□□□ 1.64
RAB40C-201ENST00000248139 POPDC3Q9HBV1 291 aa25.32■■□□□ 1.64
RAB40C-201ENST00000248139 GID8Q9NWU2 228 aa25.32■■□□□ 1.64
RAB40C-201ENST00000248139 ETAA1Q9NY74 926 aa25.32■■□□□ 1.64
RAB40C-201ENST00000248139 AGO1Q9UL18 857 aaKnown RBP25.32■■□□□ 1.64
RAB40C-201ENST00000248139 C2orf81A6NN90 581 aa25.31■■□□□ 1.64
RAB40C-201ENST00000248139 KATNA1O75449 491 aa25.31■■□□□ 1.64
RAB40C-201ENST00000248139 PSMA4P25789 261 aaKnown RBP25.31■■□□□ 1.64
RAB40C-201ENST00000248139 RING1Q06587 406 aa25.31■■□□□ 1.64
RAB40C-201ENST00000248139 FNDC5Q8NAU1 212 aa25.31■■□□□ 1.64
RAB40C-201ENST00000248139 AGPAT4Q9NRZ5 378 aa25.31■■□□□ 1.64
RAB40C-201ENST00000248139 A0A1W2PP18 115 aa25.31■■□□□ 1.64
RAB40C-201ENST00000248139 MATN4O95460 622 aa25.31■■□□□ 1.64
RAB40C-201ENST00000248139 C1RP00736 705 aa25.31■■□□□ 1.64
RAB40C-201ENST00000248139 PKMP14618 531 aaKnown RBP25.31■■□□□ 1.64
RAB40C-201ENST00000248139 IL10P22301 178 aa25.31■■□□□ 1.64
RAB40C-201ENST00000248139 GPR17Q13304 367 aa25.31■■□□□ 1.64
RAB40C-201ENST00000248139 ZUFSPQ96AP4 578 aa25.31■■□□□ 1.64
RAB40C-201ENST00000248139 ANKRD60Q9BZ19 345 aa25.31■■□□□ 1.64
RAB40C-201ENST00000248139 PNPLA3Q9NST1 481 aa25.31■■□□□ 1.64
RAB40C-201ENST00000248139 ACTR3BQ9P1U1 418 aa25.31■■□□□ 1.64
RAB40C-201ENST00000248139 TRMT6Q9UJA5 497 aaKnown RBP25.31■■□□□ 1.64
RAB40C-201ENST00000248139 HSD17B1P14061 328 aa25.3■■□□□ 1.64
RAB40C-201ENST00000248139 ATP5C1P36542 298 aaKnown RBP25.3■■□□□ 1.64
RAB40C-201ENST00000248139 INPP5AQ14642 412 aa25.3■■□□□ 1.64
RAB40C-201ENST00000248139 TAF1AQ15573 450 aaPredicted RBP25.3■■□□□ 1.64
RAB40C-201ENST00000248139 FUT10Q6P4F1 479 aa25.3■■□□□ 1.64
RAB40C-201ENST00000248139 AIG1Q9NVV5 245 aa25.3■■□□□ 1.64
RAB40C-201ENST00000248139 HSFX1Q9UBD0 423 aa25.3■■□□□ 1.64
RAB40C-201ENST00000248139 hCG_2014768A0A024R1R8 64 aa25.3■■□□□ 1.64
RAB40C-201ENST00000248139 CCDC154A6NI56 674 aa25.3■■□□□ 1.64
RAB40C-201ENST00000248139 GOLGA8CPA6NN73 597 aa25.3■■□□□ 1.64
RAB40C-201ENST00000248139 CLGNO14967 610 aa25.3■■□□□ 1.64
RAB40C-201ENST00000248139 SNX2O60749 519 aa25.3■■□□□ 1.64
RAB40C-201ENST00000248139 ESRRBO95718 433 aa25.3■■□□□ 1.64
RAB40C-201ENST00000248139 RHOCP08134 193 aa25.3■■□□□ 1.64
RAB40C-201ENST00000248139 CTPS1P17812 591 aa25.3■■□□□ 1.64
RAB40C-201ENST00000248139 FASP25445 335 aa25.3■■□□□ 1.64
RAB40C-201ENST00000248139 ERVPABLB-1P60509 514 aa25.3■■□□□ 1.64
RAB40C-201ENST00000248139 FAM189BP81408 668 aa25.3■■□□□ 1.64
RAB40C-201ENST00000248139 CREB5Q02930 508 aa25.3■■□□□ 1.64
RAB40C-201ENST00000248139 PYCR3Q53H96 274 aa25.3■■□□□ 1.64
RAB40C-201ENST00000248139 GPSM1Q86YR5 675 aa25.3■■□□□ 1.64
RAB40C-201ENST00000248139 BBS5Q8N3I7 341 aa25.3■■□□□ 1.64
RAB40C-201ENST00000248139 OR6K2Q8NGY2 324 aa25.3■■□□□ 1.64
RAB40C-201ENST00000248139 CD200R1Q8TD46 325 aa25.3■■□□□ 1.64
RAB40C-201ENST00000248139 BCL7CQ8WUZ0 217 aaPredicted RBP25.3■■□□□ 1.64
RAB40C-201ENST00000248139 PEX13Q92968 403 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms