RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 CLRN3Q8NCR9 226 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 C2CD4AQ8NCU7 369 aaPredicted RBP4.88□□□□□ -1.63
LINC00550-201ENST00000629293 DDX50Q9BQ39 737 aaKnown RBP4.88□□□□□ -1.63
LINC00550-201ENST00000629293 TRIM7Q9C029 511 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 CNGB3Q9NQW8 809 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 UCKL1Q9NWZ5 548 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 DNAJC28Q9NX36 388 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 ANAPC7Q9UJX3 599 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 VPS28Q9UK41 221 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 ACTL7BQ9Y614 415 aa4.88□□□□□ -1.63
LINC00550-201ENST00000629293 GMNCA6NCL1 334 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 VSTM5A8MXK1 200 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 F5H5T6 163 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 DFNA5O60443 496 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 C1QL1O75973 258 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 LUC7L3O95232 432 aaKnown RBP4.87□□□□□ -1.63
LINC00550-201ENST00000629293 SETSIPP0DME0 302 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 VSIG8P0DPA2 414 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 VDRP11473 427 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 CKMT2P17540 419 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 RRM1P23921 792 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 HTR3AP46098 478 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 MAP2K3P46734 347 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 BPIFB4P59827 614 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 NOMO3P69849 1222 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 PITX1P78337 314 aaPredicted RBP4.87□□□□□ -1.63
LINC00550-201ENST00000629293 CFHR1Q03591 330 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 PTK6Q13882 451 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 SLMAPQ14BN4 828 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 ERMARDQ5T6L9 678 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 ERAP2Q6P179 960 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 SYDE1Q6ZW31 735 aaPredicted RBP4.87□□□□□ -1.63
LINC00550-201ENST00000629293 USP30Q70CQ3 517 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 CHSY3Q70JA7 882 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 BHLHA9Q7RTU4 235 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 PTAR1Q7Z6K3 402 aaPredicted RBP4.87□□□□□ -1.63
LINC00550-201ENST00000629293 TAC4Q86UU9 113 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 ZBTB46Q86UZ6 589 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 PHF13Q86YI8 300 aaPredicted RBP4.87□□□□□ -1.63
LINC00550-201ENST00000629293 CMIPQ8IY22 773 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 FIBINQ8TAL6 211 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 RAPGEF5Q92565 580 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 TEX15Q9BXT5 2789 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 TRIM4Q9C037 500 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 PRR13Q9NZ81 148 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 SAMD15Q9P1V8 674 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 MTRF1LQ9UGC7 380 aaKnown RBP4.87□□□□□ -1.63
LINC00550-201ENST00000629293 SARDHQ9UL12 918 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 VANGL2Q9ULK5 521 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 CNTRLQ7Z7A1 2325 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 PSTPIP1O43586 416 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 PROSCO94903 275 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 MT-CO3P00414 261 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 AGTP01019 485 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 THEGLP0DJG4 465 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 DRD4P21917 467 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 MAN1A1P33908 653 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 NXPH1P58417 271 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 TLE3Q04726 772 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 ADCY2Q08462 1091 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 CNTN1Q12860 1018 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 SLC29A2Q14542 456 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 ELAVL3Q14576 367 aaKnown RBP4.87□□□□□ -1.63
LINC00550-201ENST00000629293 SHBQ15464 509 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 TAF5Q15542 800 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 MS4A13Q5J8X5 152 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 KIAA1614Q5VZ46 1190 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 NAPEPLDQ6IQ20 393 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 PLEKHA7Q6IQ23 1121 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 CROCCP2Q86T23 111 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 ZNF843Q8N446 348 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 C1orf162Q8NEQ5 155 aaPredicted RBP4.87□□□□□ -1.63
LINC00550-201ENST00000629293 KCTD13Q8WZ19 329 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 OR8D1Q8WZ84 308 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 VCPIP1Q96JH7 1222 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 SERPINB11Q96P15 392 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 ZNF317Q96PQ6 595 aaPredicted RBP4.87□□□□□ -1.63
LINC00550-201ENST00000629293 CENPHQ9H3R5 247 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 CCDC134Q9H6E4 229 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 DYRK4Q9NR20 520 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 DDIT4Q9NX09 232 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 IPO11Q9UI26 975 aaKnown RBP4.87□□□□□ -1.63
LINC00550-201ENST00000629293 TEP1Q99973 2627 aaKnown RBP4.87□□□□□ -1.63
LINC00550-201ENST00000629293 TCRBV5S1A1TA0A578 114 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 E7EVH7 732 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 SCAMP1O15126 338 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 TRUB2O95900 331 aaKnown RBP4.87□□□□□ -1.63
LINC00550-201ENST00000629293 CPEP16870 476 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 GOT1P17174 413 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 TACR2P21452 398 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 C5AR1P21730 350 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 KCNJ1P48048 391 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 IFFO1Q0D2I5 559 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 DLG2Q15700 870 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 CDKN3Q16667 212 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 GFOD2Q3B7J2 385 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 ACBD5Q5T8D3 534 aaPredicted RBP4.87□□□□□ -1.63
LINC00550-201ENST00000629293 SEZ6L2Q6UXD5 910 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 LINGO4Q6UY18 593 aa4.87□□□□□ -1.63
LINC00550-201ENST00000629293 MICALCLQ6ZW33 695 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms