RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 TMC3Q7Z5M5 1100 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 C10orf53Q8N6V4 93 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 OR4E2Q8NGC2 313 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.03□□□□□ -0.96
HDAC9-229ENST00000622668 KCNK4Q9NYG8 393 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 MFHAS1Q9Y4C4 1052 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 OR1A2Q9Y585 309 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 MAST2Q6P0Q8 1798 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 EVPLLA8MZ36 301 aa9.02□□□□□ -0.96
HDAC9-229ENST00000622668 B4GALT3O60512 393 aa9.02□□□□□ -0.96
HDAC9-229ENST00000622668 E2F6O75461 281 aa9.02□□□□□ -0.96
HDAC9-229ENST00000622668 GOT2P00505 430 aaKnown RBP9.02□□□□□ -0.96
HDAC9-229ENST00000622668 CNTFP26441 200 aa9.02□□□□□ -0.96
HDAC9-229ENST00000622668 SSR2P43308 183 aa9.02□□□□□ -0.96
HDAC9-229ENST00000622668 FBXW10Q5XX13 1052 aa9.02□□□□□ -0.96
HDAC9-229ENST00000622668 ADHFE1Q8IWW8 467 aa9.02□□□□□ -0.96
HDAC9-229ENST00000622668 GPR65Q8IYL9 337 aa9.02□□□□□ -0.96
HDAC9-229ENST00000622668 ADGRG2Q8IZP9 1017 aa9.02□□□□□ -0.96
HDAC9-229ENST00000622668 WDTC1Q8N5D0 677 aa9.02□□□□□ -0.96
HDAC9-229ENST00000622668 TEX9Q8N6V9 391 aa9.02□□□□□ -0.96
HDAC9-229ENST00000622668 AVL9Q8NBF6 648 aa9.02□□□□□ -0.96
HDAC9-229ENST00000622668 OR56A4Q8NGH8 313 aa9.02□□□□□ -0.96
HDAC9-229ENST00000622668 OR2T34Q8NGX1 318 aa9.02□□□□□ -0.96
HDAC9-229ENST00000622668 EPS8L3Q8TE67 593 aaKnown RBP9.02□□□□□ -0.96
HDAC9-229ENST00000622668 OR2M4Q96R27 311 aa9.02□□□□□ -0.96
HDAC9-229ENST00000622668 SLC12A4Q9UP95 1085 aa9.02□□□□□ -0.96
HDAC9-229ENST00000622668 GPR179Q6PRD1 2367 aa9.02□□□□□ -0.96
HDAC9-229ENST00000622668 SEC22BO75396 215 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 ADRB3P13945 408 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 COX7A2P14406 83 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 AGXTP21549 392 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 HLA-FP30511 346 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 IL12RB1P42701 662 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 ZNF132P52740 706 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 ABCE1P61221 599 aaKnown RBP9.02□□□□□ -0.97
HDAC9-229ENST00000622668 OC90Q02509 493 aaPredicted RBP9.02□□□□□ -0.97
HDAC9-229ENST00000622668 STX4Q12846 297 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 TAF1AQ15573 450 aaPredicted RBP9.02□□□□□ -0.97
HDAC9-229ENST00000622668 PGS1Q32NB8 556 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 ZNF783Q6ZMS7 281 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 TTC29Q8NA56 475 aaPredicted RBP9.02□□□□□ -0.97
HDAC9-229ENST00000622668 TMEM145Q8NBT3 493 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 PHC3Q8NDX5 983 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 DCBLD2Q96PD2 775 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 PSKH2Q96QS6 385 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 FCRL5Q96RD9 977 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 TMEM245Q9H330 911 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 TMEM59LQ9UK28 342 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 OR10H1Q9Y4A9 318 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 TNPO3Q9Y5L0 923 aaKnown RBP9.02□□□□□ -0.97
HDAC9-229ENST00000622668 ATG2BQ96BY7 2078 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 MYO5AQ9Y4I1 1855 aaKnown RBP9.02□□□□□ -0.97
HDAC9-229ENST00000622668 OR51F1A6NGY5 319 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 TXNDC9O14530 226 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 MAPK1P28482 360 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 ARCN1P48444 511 aaKnown RBP9.02□□□□□ -0.97
HDAC9-229ENST00000622668 PPP2R2AP63151 447 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 DLX2Q07687 328 aaPredicted RBP9.02□□□□□ -0.97
HDAC9-229ENST00000622668 TSTD2Q5T7W7 516 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 N4BP2L1Q5TBK1 243 aaPredicted RBP9.02□□□□□ -0.97
HDAC9-229ENST00000622668 CYB5D1Q6P9G0 228 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 LAYNQ6UX15 382 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 LRRC69Q6ZNQ3 347 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 SLC9B2Q86UD5 537 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 SLC22A9Q8IVM8 553 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 ZBTB2Q8N680 514 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 PTGR2Q8N8N7 351 aaPredicted RBP9.02□□□□□ -0.97
HDAC9-229ENST00000622668 TFGQ92734 400 aaPredicted RBP9.02□□□□□ -0.97
HDAC9-229ENST00000622668 DNASE1L2Q92874 299 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 OTUB1Q96FW1 271 aaPredicted RBP9.02□□□□□ -0.97
HDAC9-229ENST00000622668 QRFPRQ96P65 431 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 IL1RL2Q9HB29 575 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 R4GN57 208 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 DDX60LQ5H9U9 1706 aaKnown RBP9.02□□□□□ -0.97
HDAC9-229ENST00000622668 TMEM114B3SHH9 223 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 PEX12O00623 359 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 CCNDBP1O95273 360 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 LTA4HP09960 611 aaKnown RBP9.02□□□□□ -0.97
HDAC9-229ENST00000622668 C6P13671 934 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 NDUFS1P28331 727 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 CD38P28907 300 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 MNAT1P51948 309 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 SNX20Q7Z614 316 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 LMNTD2Q8IXW0 634 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 MAPK15Q8TD08 544 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 CPEB1Q9BZB8 566 aaKnown RBP9.02□□□□□ -0.97
HDAC9-229ENST00000622668 TCAF1Q9Y4C2 921 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 HEBP2Q9Y5Z4 205 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 IRAK3Q9Y616 596 aa9.02□□□□□ -0.97
HDAC9-229ENST00000622668 TMEM120BA0PK00 339 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 PIPSLA2A3N6 862 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 KMOO15229 486 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 CHI3L1P36222 383 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-229ENST00000622668 TAGAPQ8N103 731 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 MSANTD3Q96H12 275 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 AIF1LQ9BQI0 150 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 VCXQ9H320 206 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 LRRC19Q9H756 370 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 SGK2Q9HBY8 427 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 SPATS2LQ9NUQ6 558 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms