RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 SPAM1P38567 509 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 ETV4P43268 484 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 MAGEA12P43365 314 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 CCNG1P51959 295 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 IRF9Q00978 393 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 SLC18A2Q05940 514 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 FASTKD1Q53R41 847 aaKnown RBP17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 PIP5KL1Q5T9C9 394 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 MRNIPQ6NTE8 343 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 FBXL19Q6PCT2 694 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 TIFABQ6ZNK6 161 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 Q6ZVL8 140 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 ERN2Q76MJ5 926 aaKnown RBP17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 CEP97Q8IW35 865 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 NDUFAF2Q8N183 169 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 RFWD2Q8NHY2 731 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 HCAR2Q8TDS4 363 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 SCAMP4Q969E2 229 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 ISL2Q96A47 359 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 APOPT1Q96IL0 206 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 TBC1D10AQ9BXI6 508 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 ABCG8Q9H221 673 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 CD93Q9NPY3 652 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 SAR1AQ9NR31 198 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 GLYATL1P3A0A0U1RQE8 302 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 SYNCRIPO60506 623 aaKnown RBP17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 CYP2A6P11509 494 aaPredicted RBP17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 CNTFP26441 200 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 SPINT3P49223 89 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 CSRP3P50461 194 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 RASSF2P50749 326 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 RPS14P62263 151 aaKnown RBP17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 PDE1CQ14123 709 aaPredicted RBP17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 ARHGEF7Q14155 803 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 PUS10Q3MIT2 529 aaKnown RBP17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 TMEM92Q6UXU6 159 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 LIPIQ6XZB0 460 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 CLNKQ7Z7G1 428 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 DSG4Q86SJ6 1040 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 MTDHQ86UE4 582 aaKnown RBP17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 FAM13CQ8NE31 585 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 LPGAT1Q92604 370 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 ELMO2Q96JJ3 720 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 OMDQ99983 421 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 LNPEPQ9UIQ6 1025 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 FAM50BQ9Y247 325 aa17.23■□□□□ 0.35
PPFIA3-207ENST00000602716 KRBA1A5PL33 1030 aa17.22■□□□□ 0.35
PPFIA3-207ENST00000602716 CDKN2DP55273 166 aa17.22■□□□□ 0.35
PPFIA3-207ENST00000602716 OVGP1Q12889 678 aa17.22■□□□□ 0.35
PPFIA3-207ENST00000602716 NFATC2Q13469 925 aa17.22■□□□□ 0.35
PPFIA3-207ENST00000602716 DBN1Q16643 649 aa17.22■□□□□ 0.35
PPFIA3-207ENST00000602716 LGSNQ5TDP6 509 aa17.22■□□□□ 0.35
PPFIA3-207ENST00000602716 AGBL4Q5VU57 503 aa17.22■□□□□ 0.35
PPFIA3-207ENST00000602716 PIM3Q86V86 326 aa17.22■□□□□ 0.35
PPFIA3-207ENST00000602716 LONP2Q86WA8 852 aa17.22■□□□□ 0.35
PPFIA3-207ENST00000602716 ZNF687Q8N1G0 1237 aa17.22■□□□□ 0.35
PPFIA3-207ENST00000602716 PELI3Q8N2H9 469 aa17.22■□□□□ 0.35
PPFIA3-207ENST00000602716 OR2T3Q8NH03 318 aa17.22■□□□□ 0.35
PPFIA3-207ENST00000602716 FAM136AQ96C01 138 aa17.22■□□□□ 0.35
PPFIA3-207ENST00000602716 PPP1R16AQ96I34 528 aa17.22■□□□□ 0.35
PPFIA3-207ENST00000602716 SRPK1Q96SB4 655 aaKnown RBP17.22■□□□□ 0.35
PPFIA3-207ENST00000602716 BOCQ9BWV1 1114 aa17.22■□□□□ 0.35
PPFIA3-207ENST00000602716 SLC13A1Q9BZW2 595 aa17.22■□□□□ 0.35
PPFIA3-207ENST00000602716 C2orf42Q9NWW7 574 aa17.22■□□□□ 0.35
PPFIA3-207ENST00000602716 DCTN4Q9UJW0 460 aa17.22■□□□□ 0.35
PPFIA3-207ENST00000602716 TMPRSS11EQ9UL52 423 aa17.22■□□□□ 0.35
PPFIA3-207ENST00000602716 A0A1W2PP55 124 aa17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 NPC1O15118 1278 aa17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 DNAJC6O75061 913 aa17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 ELFN1P0C7U0 828 aa17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 GLULP15104 373 aa17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 ZNF30P17039 623 aa17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 SERPINB8P50452 374 aa17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 CLNS1AP54105 237 aaKnown RBP17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 TAS2R38P59533 333 aa17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 TAS2R39P59534 338 aa17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 CACNG1Q06432 222 aa17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 ERAP2Q6P179 960 aa17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 TAS2R42Q7RTR8 314 aa17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 GALNT7Q86SF2 657 aa17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 CBARPQ8N350 705 aaPredicted RBP17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 ZNF570Q96NI8 536 aa17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 TSSK1BQ9BXA7 367 aa17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 ASB8Q9H765 288 aa17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 ZNF358Q9NW07 568 aa17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 SLC30A1Q9Y6M5 507 aa17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 UBA6A0AVT1 1052 aaPredicted RBP17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 HNRNPCL1O60812 293 aaKnown RBP17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 PEX11AO75192 247 aa17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 PTPN4P29074 926 aa17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 PMLP29590 882 aa17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 TIAL1Q01085 375 aaKnown RBP eCLIP17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 USP10Q14694 798 aaKnown RBP17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 ATP13A5Q4VNC0 1218 aa17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 ZNF776Q68DI1 518 aaPredicted RBP17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 LMNTD2Q8IXW0 634 aa17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 PLD6Q8N2A8 252 aaKnown RBP17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 HDAC8Q9BY41 377 aa17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 TRIM55Q9BYV6 548 aa17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 RNPEPL1Q9HAU8 725 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms