RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 NPEPPSL1A6NEC2 478 aa19.55■□□□□ 0.72
CLIP3-206ENST00000593074 STX16-NPEPL1H3BU86 382 aa19.55■□□□□ 0.72
CLIP3-206ENST00000593074 LEFTY2O00292 366 aa19.55■□□□□ 0.72
CLIP3-206ENST00000593074 PPP6CO00743 305 aa19.55■□□□□ 0.72
CLIP3-206ENST00000593074 STX16O14662 325 aa19.55■□□□□ 0.72
CLIP3-206ENST00000593074 LIN7AO14910 233 aaPredicted RBP19.55■□□□□ 0.72
CLIP3-206ENST00000593074 HTRA2O43464 458 aaPredicted RBP19.55■□□□□ 0.72
CLIP3-206ENST00000593074 SMAD6O43541 496 aaKnown RBP19.55■□□□□ 0.72
CLIP3-206ENST00000593074 ENO3P13929 434 aaPredicted RBP19.55■□□□□ 0.72
CLIP3-206ENST00000593074 EEF1DP29692 281 aaKnown RBP19.55■□□□□ 0.72
CLIP3-206ENST00000593074 BMPR1AP36894 532 aa19.55■□□□□ 0.72
CLIP3-206ENST00000593074 NAA20P61599 178 aa19.55■□□□□ 0.72
CLIP3-206ENST00000593074 LCP2Q13094 533 aa19.55■□□□□ 0.72
CLIP3-206ENST00000593074 RNF111Q6ZNA4 994 aa19.55■□□□□ 0.72
CLIP3-206ENST00000593074 CAMK1DQ8IU85 385 aa19.55■□□□□ 0.72
CLIP3-206ENST00000593074 MRPL43Q8N983 215 aaKnown RBP19.55■□□□□ 0.72
CLIP3-206ENST00000593074 GPR63Q9BZJ6 419 aa19.55■□□□□ 0.72
CLIP3-206ENST00000593074 LZTS1Q9Y250 596 aa19.55■□□□□ 0.72
CLIP3-206ENST00000593074 FNDC3AQ9Y2H6 1198 aaKnown RBP19.55■□□□□ 0.72
CLIP3-206ENST00000593074 ZNF106Q9H2Y7 1883 aaKnown RBP19.54■□□□□ 0.72
CLIP3-206ENST00000593074 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.54■□□□□ 0.72
CLIP3-206ENST00000593074 HIDE1A8MVS5 230 aa19.54■□□□□ 0.72
CLIP3-206ENST00000593074 BTN3A1O00481 513 aa19.54■□□□□ 0.72
CLIP3-206ENST00000593074 AZIN1O14977 448 aa19.54■□□□□ 0.72
CLIP3-206ENST00000593074 GPC4O75487 556 aa19.54■□□□□ 0.72
CLIP3-206ENST00000593074 CSPG5O95196 566 aa19.54■□□□□ 0.72
CLIP3-206ENST00000593074 MAPK8P45983 427 aa19.54■□□□□ 0.72
CLIP3-206ENST00000593074 TMEM240Q5SV17 173 aa19.54■□□□□ 0.72
CLIP3-206ENST00000593074 TPGS1Q6ZTW0 290 aa19.54■□□□□ 0.72
CLIP3-206ENST00000593074 GRIN3AQ8TCU5 1115 aa19.54■□□□□ 0.72
CLIP3-206ENST00000593074 TWIST2Q8WVJ9 160 aa19.54■□□□□ 0.72
CLIP3-206ENST00000593074 NPAS2Q99743 824 aa19.54■□□□□ 0.72
CLIP3-206ENST00000593074 PLK2Q9NYY3 685 aa19.54■□□□□ 0.72
CLIP3-206ENST00000593074 KIAA1522Q9P206 1035 aaPredicted RBP19.54■□□□□ 0.72
CLIP3-206ENST00000593074 NRG2O14511 850 aaPredicted RBP19.53■□□□□ 0.72
CLIP3-206ENST00000593074 ALPIP09923 528 aa19.53■□□□□ 0.72
CLIP3-206ENST00000593074 CTPS1P17812 591 aa19.53■□□□□ 0.72
CLIP3-206ENST00000593074 CTNNB1P35222 781 aa19.53■□□□□ 0.72
CLIP3-206ENST00000593074 IL2P60568 153 aa19.53■□□□□ 0.72
CLIP3-206ENST00000593074 CLCQ05315 142 aa19.53■□□□□ 0.72
CLIP3-206ENST00000593074 LMAN2Q12907 356 aa19.53■□□□□ 0.72
CLIP3-206ENST00000593074 STX5Q13190 355 aa19.53■□□□□ 0.72
CLIP3-206ENST00000593074 CEACAM7Q14002 265 aa19.53■□□□□ 0.72
CLIP3-206ENST00000593074 PLPP4Q5VZY2 271 aa19.53■□□□□ 0.72
CLIP3-206ENST00000593074 METTL3Q86U44 580 aaKnown RBP19.53■□□□□ 0.72
CLIP3-206ENST00000593074 SP7Q8TDD2 431 aaPredicted RBP19.53■□□□□ 0.72
CLIP3-206ENST00000593074 MRPL1Q9BYD6 325 aaKnown RBP19.53■□□□□ 0.72
CLIP3-206ENST00000593074 SCN8AQ9UQD0 1980 aa19.53■□□□□ 0.72
CLIP3-206ENST00000593074 H3BNX3 289 aa19.53■□□□□ 0.72
CLIP3-206ENST00000593074 GAPDHSO14556 408 aaPredicted RBP19.53■□□□□ 0.72
CLIP3-206ENST00000593074 GPR39O43194 453 aa19.53■□□□□ 0.72
CLIP3-206ENST00000593074 TLL1O43897 1013 aa19.53■□□□□ 0.72
CLIP3-206ENST00000593074 SOCS5O75159 536 aa19.53■□□□□ 0.72
CLIP3-206ENST00000593074 ACADVLP49748 655 aa19.53■□□□□ 0.72
CLIP3-206ENST00000593074 FOXA1P55317 472 aa19.53■□□□□ 0.72
CLIP3-206ENST00000593074 BLMHQ13867 455 aa19.53■□□□□ 0.72
CLIP3-206ENST00000593074 AGKQ53H12 422 aa19.53■□□□□ 0.72
CLIP3-206ENST00000593074 ANKS6Q68DC2 871 aa19.53■□□□□ 0.72
CLIP3-206ENST00000593074 TXNDC11Q6PKC3 985 aa19.53■□□□□ 0.72
CLIP3-206ENST00000593074 CERS6Q6ZMG9 384 aa19.53■□□□□ 0.72
CLIP3-206ENST00000593074 TAS2R42Q7RTR8 314 aa19.53■□□□□ 0.72
CLIP3-206ENST00000593074 OR6K2Q8NGY2 324 aa19.53■□□□□ 0.72
CLIP3-206ENST00000593074 FIBINQ8TAL6 211 aa19.53■□□□□ 0.72
CLIP3-206ENST00000593074 TRPC4APQ8TEL6 797 aa19.53■□□□□ 0.72
CLIP3-206ENST00000593074 LINGO1Q96FE5 620 aa19.53■□□□□ 0.72
CLIP3-206ENST00000593074 EVLQ9UI08 416 aaPredicted RBP19.53■□□□□ 0.72
CLIP3-206ENST00000593074 PACSIN3Q9UKS6 424 aa19.53■□□□□ 0.72
CLIP3-206ENST00000593074 SARDHQ9UL12 918 aa19.53■□□□□ 0.72
CLIP3-206ENST00000593074 CLEC4EQ9ULY5 219 aa19.53■□□□□ 0.72
CLIP3-206ENST00000593074 TMCO1Q9UM00 188 aa19.53■□□□□ 0.72
CLIP3-206ENST00000593074 SLC30A1Q9Y6M5 507 aa19.53■□□□□ 0.72
CLIP3-206ENST00000593074 MKI67P46013 3256 aaKnown RBP19.52■□□□□ 0.72
CLIP3-206ENST00000593074 A0A0J9YYE9 177 aa19.52■□□□□ 0.72
CLIP3-206ENST00000593074 ATP6AP2A0A1C7CYW4 349 aa19.52■□□□□ 0.72
CLIP3-206ENST00000593074 PIP5K1BO14986 540 aa19.52■□□□□ 0.72
CLIP3-206ENST00000593074 ATP6AP2O75787 350 aa19.52■□□□□ 0.72
CLIP3-206ENST00000593074 TRBC1P01850 177 aa19.52■□□□□ 0.72
CLIP3-206ENST00000593074 CYBBP04839 570 aa19.52■□□□□ 0.72
CLIP3-206ENST00000593074 ALDOCP09972 364 aaKnown RBP19.52■□□□□ 0.72
CLIP3-206ENST00000593074 XRCC1P18887 633 aaPredicted RBP19.52■□□□□ 0.72
CLIP3-206ENST00000593074 PSMD8P48556 350 aa19.52■□□□□ 0.72
CLIP3-206ENST00000593074 CLCN7P51798 805 aa19.52■□□□□ 0.72
CLIP3-206ENST00000593074 LBX1P52954 281 aa19.52■□□□□ 0.72
CLIP3-206ENST00000593074 BCL2L1Q07817 233 aa19.52■□□□□ 0.72
CLIP3-206ENST00000593074 ANO7Q6IWH7 933 aa19.52■□□□□ 0.72
CLIP3-206ENST00000593074 ZNF483Q8TF39 744 aaPredicted RBP19.52■□□□□ 0.72
CLIP3-206ENST00000593074 EEF1AKMT1Q8WVE0 214 aa19.52■□□□□ 0.72
CLIP3-206ENST00000593074 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.52■□□□□ 0.72
CLIP3-206ENST00000593074 SMG9Q9H0W8 520 aaKnown RBP19.52■□□□□ 0.72
CLIP3-206ENST00000593074 AKTIPQ9H8T0 292 aa19.52■□□□□ 0.72
CLIP3-206ENST00000593074 ABCB8Q9NUT2 735 aa19.52■□□□□ 0.72
CLIP3-206ENST00000593074 HCFC1R1Q9NWW0 138 aa19.52■□□□□ 0.72
CLIP3-206ENST00000593074 CACNA2D2Q9NY47 1150 aa19.52■□□□□ 0.72
CLIP3-206ENST00000593074 PCDHB1Q9Y5F3 818 aa19.52■□□□□ 0.72
CLIP3-206ENST00000593074 SLC4A7Q9Y6M7 1214 aa19.52■□□□□ 0.72
CLIP3-206ENST00000593074 CXorf51AA0A1B0GTR3 108 aa19.52■□□□□ 0.71
CLIP3-206ENST00000593074 E5RI56 91 aa19.52■□□□□ 0.71
CLIP3-206ENST00000593074 FBP2O00757 339 aa19.52■□□□□ 0.71
CLIP3-206ENST00000593074 PRMT5O14744 637 aaPredicted RBP19.52■□□□□ 0.71
CLIP3-206ENST00000593074 ZNF821O75541 412 aaPredicted RBP19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms