RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 TMED2Q15363 201 aa16.01■□□□□ 0.15
SS18-226ENST00000585241 SETMARQ53H47 684 aaPredicted RBP16.01■□□□□ 0.15
SS18-226ENST00000585241 TMEM31Q5JXX7 168 aa16.01■□□□□ 0.15
SS18-226ENST00000585241 AGBL2Q5U5Z8 902 aa16.01■□□□□ 0.15
SS18-226ENST00000585241 CNSTQ6PJW8 725 aa16.01■□□□□ 0.15
SS18-226ENST00000585241 ADAMTSL4Q6UY14 1074 aa16.01■□□□□ 0.15
SS18-226ENST00000585241 TIFABQ6ZNK6 161 aa16.01■□□□□ 0.15
SS18-226ENST00000585241 TAS2R42Q7RTR8 314 aa16.01■□□□□ 0.15
SS18-226ENST00000585241 CYP4X1Q8N118 509 aa16.01■□□□□ 0.15
SS18-226ENST00000585241 PELI3Q8N2H9 469 aa16.01■□□□□ 0.15
SS18-226ENST00000585241 PIAS4Q8N2W9 510 aaPredicted RBP16.01■□□□□ 0.15
SS18-226ENST00000585241 PNPLA1Q8N8W4 532 aa16.01■□□□□ 0.15
SS18-226ENST00000585241 BTN2A2Q8WVV5 523 aa16.01■□□□□ 0.15
SS18-226ENST00000585241 GLYATL1Q969I3 302 aa16.01■□□□□ 0.15
SS18-226ENST00000585241 CENPTQ96BT3 561 aa16.01■□□□□ 0.15
SS18-226ENST00000585241 TTC1Q99614 292 aa16.01■□□□□ 0.15
SS18-226ENST00000585241 P2RY12Q9H244 342 aa16.01■□□□□ 0.15
SS18-226ENST00000585241 SPATA6Q9NWH7 488 aaPredicted RBP16.01■□□□□ 0.15
SS18-226ENST00000585241 ZDHHC3Q9NYG2 299 aa16.01■□□□□ 0.15
SS18-226ENST00000585241 CNOT6Q9ULM6 557 aaKnown RBP16.01■□□□□ 0.15
SS18-226ENST00000585241 ZDBF2Q9HCK1 2354 aa16■□□□□ 0.15
SS18-226ENST00000585241 GOLGA8CPA6NN73 597 aa16■□□□□ 0.15
SS18-226ENST00000585241 K7ESM1 405 aa16■□□□□ 0.15
SS18-226ENST00000585241 RGS16O15492 202 aaPredicted RBP16■□□□□ 0.15
SS18-226ENST00000585241 NDUFS3O75489 264 aa16■□□□□ 0.15
SS18-226ENST00000585241 NUDT1P36639 197 aa16■□□□□ 0.15
SS18-226ENST00000585241 MAGEA12P43365 314 aa16■□□□□ 0.15
SS18-226ENST00000585241 CSRP3P50461 194 aa16■□□□□ 0.15
SS18-226ENST00000585241 SGCGQ13326 291 aa16■□□□□ 0.15
SS18-226ENST00000585241 LRRC14Q15048 493 aa16■□□□□ 0.15
SS18-226ENST00000585241 IRF4Q15306 451 aa16■□□□□ 0.15
SS18-226ENST00000585241 GPRC6AQ5T6X5 926 aa16■□□□□ 0.15
SS18-226ENST00000585241 KIAA0895LQ68EN5 471 aa16■□□□□ 0.15
SS18-226ENST00000585241 PNCKQ6P2M8 343 aa16■□□□□ 0.15
SS18-226ENST00000585241 RBFAQ8N0V3 343 aa16■□□□□ 0.15
SS18-226ENST00000585241 HEXDCQ8WVB3 486 aa16■□□□□ 0.15
SS18-226ENST00000585241 ARL8AQ96BM9 186 aa16■□□□□ 0.15
SS18-226ENST00000585241 TLCD1Q96CP7 247 aa16■□□□□ 0.15
SS18-226ENST00000585241 BIRC8Q96P09 236 aa16■□□□□ 0.15
SS18-226ENST00000585241 FAM126AQ9BYI3 521 aaPredicted RBP16■□□□□ 0.15
SS18-226ENST00000585241 STMN4Q9H169 189 aaPredicted RBP16■□□□□ 0.15
SS18-226ENST00000585241 MED4Q9NPJ6 270 aa16■□□□□ 0.15
SS18-226ENST00000585241 TBK1Q9UHD2 729 aa16■□□□□ 0.15
SS18-226ENST00000585241 CACNA1IQ9P0X4 2223 aa16■□□□□ 0.15
SS18-226ENST00000585241 VCANP13611 3396 aa15.99■□□□□ 0.15
SS18-226ENST00000585241 PRR23AA6NEV1 266 aa15.99■□□□□ 0.15
SS18-226ENST00000585241 FAM47DPA6NHR8 397 aa15.99■□□□□ 0.15
SS18-226ENST00000585241 TRIM49D1C9J1S8 452 aa15.99■□□□□ 0.15
SS18-226ENST00000585241 PRMT5O14744 637 aaPredicted RBP15.99■□□□□ 0.15
SS18-226ENST00000585241 RAD51BO15315 384 aa15.99■□□□□ 0.15
SS18-226ENST00000585241 PAK4O96013 591 aaPredicted RBP15.99■□□□□ 0.15
SS18-226ENST00000585241 ESR1P03372 595 aa15.99■□□□□ 0.15
SS18-226ENST00000585241 IGHV4-34P06331 123 aa15.99■□□□□ 0.15
SS18-226ENST00000585241 ZNF7P17097 686 aaPredicted RBP15.99■□□□□ 0.15
SS18-226ENST00000585241 CD9P21926 228 aa15.99■□□□□ 0.15
SS18-226ENST00000585241 ATP5DP30049 168 aa15.99■□□□□ 0.15
SS18-226ENST00000585241 IGFALSP35858 605 aa15.99■□□□□ 0.15
SS18-226ENST00000585241 TRIM23P36406 574 aa15.99■□□□□ 0.15
SS18-226ENST00000585241 NSG1P42857 185 aa15.99■□□□□ 0.15
SS18-226ENST00000585241 GPR1P46091 355 aa15.99■□□□□ 0.15
SS18-226ENST00000585241 B4GALNT1Q00973 533 aa15.99■□□□□ 0.15
SS18-226ENST00000585241 TTMPQ5BVD1 217 aa15.99■□□□□ 0.15
SS18-226ENST00000585241 LDLRAP1Q5SW96 308 aa15.99■□□□□ 0.15
SS18-226ENST00000585241 RAET1GQ6H3X3 334 aa15.99■□□□□ 0.15
SS18-226ENST00000585241 ZNF549Q6P9A3 640 aa15.99■□□□□ 0.15
SS18-226ENST00000585241 TRABD2AQ86V40 505 aa15.99■□□□□ 0.15
SS18-226ENST00000585241 PHYKPLQ8IUZ5 450 aa15.99■□□□□ 0.15
SS18-226ENST00000585241 DCLK2Q8N568 766 aa15.99■□□□□ 0.15
SS18-226ENST00000585241 TMEM105Q8N8V8 129 aa15.99■□□□□ 0.15
SS18-226ENST00000585241 PLA2G15Q8NCC3 412 aa15.99■□□□□ 0.15
SS18-226ENST00000585241 COX14Q96I36 57 aa15.99■□□□□ 0.15
SS18-226ENST00000585241 COPS8Q99627 209 aa15.99■□□□□ 0.15
SS18-226ENST00000585241 AARSD1Q9BTE6 412 aaKnown RBP15.99■□□□□ 0.15
SS18-226ENST00000585241 C6orf106Q9H6K1 298 aaPredicted RBP15.99■□□□□ 0.15
SS18-226ENST00000585241 MBNL1Q9NR56 388 aaKnown RBP15.99■□□□□ 0.15
SS18-226ENST00000585241 MTO1Q9Y2Z2 717 aaKnown RBP15.99■□□□□ 0.15
SS18-226ENST00000585241 PCDHB1Q9Y5F3 818 aa15.99■□□□□ 0.15
SS18-226ENST00000585241 COMMD10Q9Y6G5 202 aa15.99■□□□□ 0.15
SS18-226ENST00000585241 DOCK9Q9BZ29 2069 aa15.98■□□□□ 0.15
SS18-226ENST00000585241 FAM95CA0A1B0GW59 222 aa15.98■□□□□ 0.15
SS18-226ENST00000585241 OR1I1O60431 355 aa15.98■□□□□ 0.15
SS18-226ENST00000585241 ALDOAP04075 364 aaKnown RBP15.98■□□□□ 0.15
SS18-226ENST00000585241 PKMP14618 531 aaKnown RBP15.98■□□□□ 0.15
SS18-226ENST00000585241 ABCG1P45844 678 aa15.98■□□□□ 0.15
SS18-226ENST00000585241 PXNP49023 591 aaPredicted RBP15.98■□□□□ 0.15
SS18-226ENST00000585241 POU4F1Q01851 419 aa15.98■□□□□ 0.15
SS18-226ENST00000585241 BMPR2Q13873 1038 aa15.98■□□□□ 0.15
SS18-226ENST00000585241 ZKSCAN8Q15776 578 aaPredicted RBP15.98■□□□□ 0.15
SS18-226ENST00000585241 CTSL3PQ5NE16 218 aa15.98■□□□□ 0.15
SS18-226ENST00000585241 MROH9Q5TGP6 573 aa15.98■□□□□ 0.15
SS18-226ENST00000585241 FAM45BPQ6NSW5 357 aa15.98■□□□□ 0.15
SS18-226ENST00000585241 MACC1Q6ZN28 852 aa15.98■□□□□ 0.15
SS18-226ENST00000585241 SH2D5Q6ZV89 423 aa15.98■□□□□ 0.15
SS18-226ENST00000585241 WDR5BQ86VZ2 330 aa15.98■□□□□ 0.15
SS18-226ENST00000585241 MAML2Q8IZL2 1156 aaPredicted RBP15.98■□□□□ 0.15
SS18-226ENST00000585241 CADM4Q8NFZ8 388 aa15.98■□□□□ 0.15
SS18-226ENST00000585241 FAM45AQ8TCE6 357 aa15.98■□□□□ 0.15
SS18-226ENST00000585241 RLN3Q8WXF3 142 aa15.98■□□□□ 0.15
SS18-226ENST00000585241 CCDC97Q96F63 343 aaPredicted RBP15.98■□□□□ 0.15
SS18-226ENST00000585241 ATP6V1G3Q96LB4 118 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms