RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 NTRK2Q16620 822 aa4.66□□□□□ -1.66
SMCHD1-205ENST00000581383 RARS2Q5T160 578 aaKnown RBP4.66□□□□□ -1.66
SMCHD1-205ENST00000581383 FAM69BQ5VUD6 431 aa4.66□□□□□ -1.66
SMCHD1-205ENST00000581383 NSUN5P2Q63ZY6 315 aa4.66□□□□□ -1.66
SMCHD1-205ENST00000581383 ZNF280DQ6N043 979 aa4.66□□□□□ -1.66
SMCHD1-205ENST00000581383 Q6ZTC4 211 aa4.66□□□□□ -1.66
SMCHD1-205ENST00000581383 AACSQ86V21 672 aa4.66□□□□□ -1.66
SMCHD1-205ENST00000581383 NR2C2APQ86WQ0 139 aa4.66□□□□□ -1.66
SMCHD1-205ENST00000581383 PCDH20Q8N6Y1 951 aaKnown RBP4.66□□□□□ -1.66
SMCHD1-205ENST00000581383 OR2AK2Q8NG84 335 aa4.66□□□□□ -1.66
SMCHD1-205ENST00000581383 OR1J2Q8NGS2 313 aa4.66□□□□□ -1.66
SMCHD1-205ENST00000581383 NUDCD2Q8WVJ2 157 aa4.66□□□□□ -1.66
SMCHD1-205ENST00000581383 CCDC34Q96HJ3 373 aa4.66□□□□□ -1.66
SMCHD1-205ENST00000581383 PAFAH2Q99487 392 aa4.66□□□□□ -1.66
SMCHD1-205ENST00000581383 CMKLR1Q99788 373 aa4.66□□□□□ -1.66
SMCHD1-205ENST00000581383 GIMAP4Q9NUV9 329 aa4.66□□□□□ -1.66
SMCHD1-205ENST00000581383 SELENONQ9NZV5 590 aa4.66□□□□□ -1.66
SMCHD1-205ENST00000581383 ACSL5Q9ULC5 683 aa4.66□□□□□ -1.66
SMCHD1-205ENST00000581383 PCDHA7Q9UN72 937 aa4.66□□□□□ -1.66
SMCHD1-205ENST00000581383 MAGED1Q9Y5V3 778 aaPredicted RBP4.66□□□□□ -1.66
SMCHD1-205ENST00000581383 A0A1W2PR77 199 aa4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 KANSL1LA0AUZ9 987 aa4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 SH2B2O14492 632 aaPredicted RBP4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 SPINT2O43291 252 aa4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 PLOD3O60568 738 aa4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 PRSS2P07478 247 aa4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 ADRB2P07550 413 aa4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 KRTAP5-9P26371 169 aa4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 HSD17B4P51659 736 aa4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 SREBF2Q12772 1141 aa4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 MAD2L1Q13257 205 aaPredicted RBP4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 IGSF11Q5DX21 431 aa4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 XKR9Q5GH70 373 aa4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 KCNT1Q5JUK3 1230 aa4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 DCST1Q5T197 706 aa4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 ZNF324BQ6AW86 544 aaPredicted RBP4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 GPR139Q6DWJ6 353 aa4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 C8orf82Q6P1X6 216 aaPredicted RBP4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 CCDC190Q86UF4 302 aa4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 ARID3BQ8IVW6 561 aaPredicted RBP4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 RBMXL3Q8N7X1 1067 aaKnown RBP4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 ZBTB8BQ8NAP8 495 aaPredicted RBP4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 APPL2Q8NEU8 664 aa4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 TRPC4APQ8TEL6 797 aa4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 SNRNP27Q8WVK2 155 aaKnown RBP4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 LRRC59Q96AG4 307 aaKnown RBP4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 MOAP1Q96BY2 351 aa4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 SERINC2Q96SA4 455 aa4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 SPRY4Q9C004 299 aa4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 UBA2Q9UBT2 640 aaPredicted RBP4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 STK39Q9UEW8 545 aa4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 PADI1Q9ULC6 663 aa4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 PLAGL1Q9UM63 463 aa4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 EXO1Q9UQ84 846 aaKnown RBP4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 PASKQ96RG2 1323 aa4.65□□□□□ -1.67
SMCHD1-205ENST00000581383 IGLV5-52A0A0A0MRZ9 124 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 A0A0U1RQJ8 604 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 SYNDIG1LA6NDD5 238 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 EIF4E1BA6NMX2 242 aaKnown RBP4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 SMAD9O15198 467 aaKnown RBP4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 ADAMDEC1O15204 470 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 PAPSS1O43252 624 aaPredicted RBP4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 ADAM20O43506 726 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 PLPP2O43688 288 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 PAPSS2O95340 614 aaPredicted RBP4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 DNTTP04053 509 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 NR2F1P10589 423 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 RRM1P23921 792 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 TNFRSF8P28908 595 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 STAT2P52630 851 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 SEC61BP60468 96 aaKnown RBP4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 ECT2LQ008S8 904 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 CALD1Q05682 793 aaKnown RBP4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 TRAF2Q12933 501 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 DECR1Q16698 335 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 EFHC1Q5JVL4 640 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 FRG2Q64ET8 278 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 RGMBQ6NW40 437 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 KRBA2Q6ZNG9 492 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 EPHX4Q8IUS5 362 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 SPATA2LQ8IUW3 424 aaPredicted RBP4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 CHERPQ8IWX8 916 aaKnown RBP4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 RASGEF1CQ8N431 466 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 WFIKKN2Q8TEU8 576 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 FAM216AQ8WUB2 273 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 TMED6Q8WW62 240 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 PRPF31Q8WWY3 499 aaKnown RBP4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 MIB2Q96AX9 1013 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 MTBPQ96DY7 904 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 C3orf30Q96M34 536 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 SMC6Q96SB8 1091 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 ABHD1Q96SE0 405 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 KIFC3Q9BVG8 833 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 APOL6Q9BWW8 343 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 OSGEPL1Q9H4B0 414 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 DNAJC18Q9H819 358 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 OCIAD1Q9NX40 245 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 WSB2Q9NYS7 404 aaPredicted RBP4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 LOXL2Q9Y4K0 774 aa4.64□□□□□ -1.67
SMCHD1-205ENST00000581383 HS3ST1O14792 307 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms