RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 CHST15Q7LFX5 561 aaPredicted RBP13.7□□□□□ -0.22
GTF3C1-211ENST00000569653 ZNF605Q86T29 641 aa13.7□□□□□ -0.22
GTF3C1-211ENST00000569653 RAVER1Q8IY67 606 aaKnown RBP13.7□□□□□ -0.22
GTF3C1-211ENST00000569653 NDUFAF2Q8N183 169 aa13.7□□□□□ -0.22
GTF3C1-211ENST00000569653 EXTL1Q92935 676 aa13.7□□□□□ -0.22
GTF3C1-211ENST00000569653 SGF29Q96ES7 293 aa13.7□□□□□ -0.22
GTF3C1-211ENST00000569653 MED8Q96G25 268 aa13.7□□□□□ -0.22
GTF3C1-211ENST00000569653 MLPHQ9BV36 600 aaPredicted RBP13.7□□□□□ -0.22
GTF3C1-211ENST00000569653 NHEJ1Q9H9Q4 299 aaPredicted RBP13.7□□□□□ -0.22
GTF3C1-211ENST00000569653 KCNK4Q9NYG8 393 aa13.7□□□□□ -0.22
GTF3C1-211ENST00000569653 SCHIP1Q9P0W5 487 aaPredicted RBP13.7□□□□□ -0.22
GTF3C1-211ENST00000569653 SLC23A2Q9UGH3 650 aa13.7□□□□□ -0.22
GTF3C1-211ENST00000569653 B3GALT1Q9Y5Z6 326 aa13.7□□□□□ -0.22
GTF3C1-211ENST00000569653 APOL1O14791 398 aa13.69□□□□□ -0.22
GTF3C1-211ENST00000569653 NUAK1O60285 661 aa13.69□□□□□ -0.22
GTF3C1-211ENST00000569653 SLC4A1P02730 911 aa13.69□□□□□ -0.22
GTF3C1-211ENST00000569653 COMTP21964 271 aa13.69□□□□□ -0.22
GTF3C1-211ENST00000569653 MARCKSL1P49006 195 aa13.69□□□□□ -0.22
GTF3C1-211ENST00000569653 DYNLT1P63172 113 aa13.69□□□□□ -0.22
GTF3C1-211ENST00000569653 TBX2Q13207 712 aaPredicted RBP13.69□□□□□ -0.22
GTF3C1-211ENST00000569653 NFATC2Q13469 925 aa13.69□□□□□ -0.22
GTF3C1-211ENST00000569653 LRP8Q14114 963 aa13.69□□□□□ -0.22
GTF3C1-211ENST00000569653 PRKD1Q15139 912 aaPredicted RBP13.69□□□□□ -0.22
GTF3C1-211ENST00000569653 PCSK7Q16549 785 aa13.69□□□□□ -0.22
GTF3C1-211ENST00000569653 ZFYVE27Q5T4F4 411 aa13.69□□□□□ -0.22
GTF3C1-211ENST00000569653 TMC3Q7Z5M5 1100 aa13.69□□□□□ -0.22
GTF3C1-211ENST00000569653 ADGRG6Q86SQ4 1221 aa13.69□□□□□ -0.22
GTF3C1-211ENST00000569653 VSIG1Q86XK7 387 aa13.69□□□□□ -0.22
GTF3C1-211ENST00000569653 ZNF547Q8IVP9 402 aa13.69□□□□□ -0.22
GTF3C1-211ENST00000569653 ART4Q93070 314 aa13.69□□□□□ -0.22
GTF3C1-211ENST00000569653 NKD1Q969G9 470 aa13.69□□□□□ -0.22
GTF3C1-211ENST00000569653 CCDC42Q96M95 316 aa13.69□□□□□ -0.22
GTF3C1-211ENST00000569653 SLC25A51Q9H1U9 297 aa13.69□□□□□ -0.22
GTF3C1-211ENST00000569653 PRDM8Q9NQV8 689 aa13.69□□□□□ -0.22
GTF3C1-211ENST00000569653 PKD2L2Q9NZM6 624 aa13.69□□□□□ -0.22
GTF3C1-211ENST00000569653 LCMT1Q9UIC8 334 aa13.69□□□□□ -0.22
GTF3C1-211ENST00000569653 DNPEPQ9ULA0 475 aa13.69□□□□□ -0.22
GTF3C1-211ENST00000569653 ZNF711Q9Y462 761 aa13.69□□□□□ -0.22
GTF3C1-211ENST00000569653 PCDHGA3Q9Y5H0 932 aa13.69□□□□□ -0.22
GTF3C1-211ENST00000569653 FLNCQ14315 2725 aa13.69□□□□□ -0.22
GTF3C1-211ENST00000569653 RGSL1A5PLK6 1076 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 A8MU76 341 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 GPR39O43194 453 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 MTX2O75431 263 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 PYGLP06737 847 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 TNNT1P13805 278 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 BPIP17213 487 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 ITGB6P18564 788 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 CA4P22748 312 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 PTPN3P26045 913 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 CDKN2BP42772 138 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 DCDC1P59894 354 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 UBE2IP63279 158 aaKnown RBP13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 HHEXQ03014 270 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 WASHC5Q12768 1159 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 TRA2AQ13595 282 aaKnown RBP eCLIP13.68□□□□□ -0.225e-8■■□□□ 11.4
GTF3C1-211ENST00000569653 PDK1Q15118 436 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 TCEAL1Q15170 157 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 PLA2G4EQ3MJ16 856 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 MANEAQ5SRI9 462 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 LRRC38Q5VT99 294 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 ANKS6Q68DC2 871 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 TMEM71Q6P5X7 295 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 CRTC3Q6UUV7 619 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 KDELC1Q6UW63 502 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 RFX6Q8HWS3 928 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 TAAR9Q96RI9 348 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 HERPUD2Q9BSE4 406 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 TBC1D10AQ9BXI6 508 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 SPRY4Q9C004 299 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 B3GNT4Q9C0J1 378 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 OR2AG1Q9H205 316 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 GLOD4Q9HC38 313 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 SARS2Q9NP81 518 aaKnown RBP13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 UBP1Q9NZI7 540 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 OGFRQ9NZT2 677 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 SEPT10Q9P0V9 454 aa13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 NFKBIL1Q9UBC1 381 aaPredicted RBP13.68□□□□□ -0.22
GTF3C1-211ENST00000569653 EFCAB7A8K855 629 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 B8ZZF3 427 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 F5H423 210 aaPredicted RBP13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 CHUKO15111 745 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 GRID2O43424 1007 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 SNX2O60749 519 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 PMPCBO75439 489 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 FAM87AP0C7U9 286 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 F3P13726 295 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 UGT1A3P35503 534 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 ARHGAP25P42331 645 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 CHRNA4P43681 627 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 GPLD1P80108 840 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 NFKB2Q00653 900 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 CLCA4Q14CN2 919 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 TBR1Q16650 682 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 SNAP47Q5SQN1 464 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 ARHGAP22Q7Z5H3 698 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 NT5DC3Q86UY8 548 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 TTC30BQ8N4P2 665 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 AGBL5Q8NDL9 886 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 RNF31Q96EP0 1072 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms