RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 RHOT2Q8IXI1 618 aa23.49■■□□□ 1.35
RAB40C-209ENST00000565511 HTR3CQ8WXA8 447 aa23.49■■□□□ 1.35
RAB40C-209ENST00000565511 ART4Q93070 314 aa23.49■■□□□ 1.35
RAB40C-209ENST00000565511 CCDC42Q96M95 316 aa23.49■■□□□ 1.35
RAB40C-209ENST00000565511 SLC25A51Q9H1U9 297 aa23.49■■□□□ 1.35
RAB40C-209ENST00000565511 OR2AG1Q9H205 316 aa23.49■■□□□ 1.35
RAB40C-209ENST00000565511 TMPRSS11EQ9UL52 423 aa23.49■■□□□ 1.35
RAB40C-209ENST00000565511 B3GALT1Q9Y5Z6 326 aa23.49■■□□□ 1.35
RAB40C-209ENST00000565511 IQCJ-SCHIP1C9J366 451 aaPredicted RBP23.48■■□□□ 1.35
RAB40C-209ENST00000565511 PYCARD-AS1I3L0S3 204 aa23.48■■□□□ 1.35
RAB40C-209ENST00000565511 NUAK1O60285 661 aa23.48■■□□□ 1.35
RAB40C-209ENST00000565511 SNX2O60749 519 aa23.48■■□□□ 1.35
RAB40C-209ENST00000565511 PTPN3P26045 913 aa23.48■■□□□ 1.35
RAB40C-209ENST00000565511 CD68P34810 354 aaPredicted RBP23.48■■□□□ 1.35
RAB40C-209ENST00000565511 CYP4F2P78329 520 aa23.48■■□□□ 1.35
RAB40C-209ENST00000565511 HHEXQ03014 270 aa23.48■■□□□ 1.35
RAB40C-209ENST00000565511 TBX2Q13207 712 aaPredicted RBP23.48■■□□□ 1.35
RAB40C-209ENST00000565511 TRA2AQ13595 282 aaKnown RBP eCLIP23.48■■□□□ 1.35
RAB40C-209ENST00000565511 PDK1Q15118 436 aa23.48■■□□□ 1.35
RAB40C-209ENST00000565511 PRKD1Q15139 912 aaPredicted RBP23.48■■□□□ 1.35
RAB40C-209ENST00000565511 TAZQ16635 292 aa23.48■■□□□ 1.35
RAB40C-209ENST00000565511 MANEAQ5SRI9 462 aa23.48■■□□□ 1.35
RAB40C-209ENST00000565511 LRRC38Q5VT99 294 aa23.48■■□□□ 1.35
RAB40C-209ENST00000565511 TMEM71Q6P5X7 295 aa23.48■■□□□ 1.35
RAB40C-209ENST00000565511 IYDQ6PHW0 289 aa23.48■■□□□ 1.35
RAB40C-209ENST00000565511 TMC3Q7Z5M5 1100 aa23.48■■□□□ 1.35
RAB40C-209ENST00000565511 ADGRG6Q86SQ4 1221 aa23.48■■□□□ 1.35
RAB40C-209ENST00000565511 CCHCR1Q8TD31 782 aa23.48■■□□□ 1.35
RAB40C-209ENST00000565511 EXTL1Q92935 676 aa23.48■■□□□ 1.35
RAB40C-209ENST00000565511 SGF29Q96ES7 293 aa23.48■■□□□ 1.35
RAB40C-209ENST00000565511 SPATA16Q9BXB7 569 aa23.48■■□□□ 1.35
RAB40C-209ENST00000565511 ADGRE3Q9BY15 652 aa23.48■■□□□ 1.35
RAB40C-209ENST00000565511 TSPY26PQ9H489 355 aa23.48■■□□□ 1.35
RAB40C-209ENST00000565511 ZFYVE1Q9HBF4 777 aa23.48■■□□□ 1.35
RAB40C-209ENST00000565511 GLOD4Q9HC38 313 aa23.48■■□□□ 1.35
RAB40C-209ENST00000565511 PRDM8Q9NQV8 689 aa23.48■■□□□ 1.35
RAB40C-209ENST00000565511 UBP1Q9NZI7 540 aa23.48■■□□□ 1.35
RAB40C-209ENST00000565511 SCHIP1Q9P0W5 487 aaPredicted RBP23.48■■□□□ 1.35
RAB40C-209ENST00000565511 SLC23A2Q9UGH3 650 aa23.48■■□□□ 1.35
RAB40C-209ENST00000565511 TFR2Q9UP52 801 aa23.48■■□□□ 1.35
RAB40C-209ENST00000565511 SETXQ7Z333 2677 aaKnown RBP23.48■■□□□ 1.35
RAB40C-209ENST00000565511 ZNF106Q9H2Y7 1883 aaKnown RBP23.47■■□□□ 1.35
RAB40C-209ENST00000565511 RGSL1A5PLK6 1076 aa23.47■■□□□ 1.35
RAB40C-209ENST00000565511 GRID2O43424 1007 aa23.47■■□□□ 1.35
RAB40C-209ENST00000565511 CDKN2BP42772 138 aa23.47■■□□□ 1.35
RAB40C-209ENST00000565511 MARCKSL1P49006 195 aa23.47■■□□□ 1.35
RAB40C-209ENST00000565511 CDK18Q07002 472 aa23.47■■□□□ 1.35
RAB40C-209ENST00000565511 PEX6Q13608 980 aa23.47■■□□□ 1.35
RAB40C-209ENST00000565511 TCEAL1Q15170 157 aa23.47■■□□□ 1.35
RAB40C-209ENST00000565511 PLA2G4EQ3MJ16 856 aa23.47■■□□□ 1.35
RAB40C-209ENST00000565511 ZNF569Q5MCW4 686 aa23.47■■□□□ 1.35
RAB40C-209ENST00000565511 SNAP47Q5SQN1 464 aa23.47■■□□□ 1.35
RAB40C-209ENST00000565511 BMPERQ8N8U9 685 aa23.47■■□□□ 1.35
RAB40C-209ENST00000565511 MED8Q96G25 268 aa23.47■■□□□ 1.35
RAB40C-209ENST00000565511 TAAR9Q96RI9 348 aa23.47■■□□□ 1.35
RAB40C-209ENST00000565511 SLC38A3Q99624 504 aa23.47■■□□□ 1.35
RAB40C-209ENST00000565511 CARD9Q9H257 536 aa23.47■■□□□ 1.35
RAB40C-209ENST00000565511 SARS2Q9NP81 518 aaKnown RBP23.47■■□□□ 1.35
RAB40C-209ENST00000565511 PDP2Q9P2J9 529 aa23.47■■□□□ 1.35
RAB40C-209ENST00000565511 F5H423 210 aaPredicted RBP23.46■■□□□ 1.35
RAB40C-209ENST00000565511 PPP1R12AO14974 1030 aaPredicted RBP23.46■■□□□ 1.35
RAB40C-209ENST00000565511 MTX2O75431 263 aa23.46■■□□□ 1.35
RAB40C-209ENST00000565511 BPIP17213 487 aa23.46■■□□□ 1.35
RAB40C-209ENST00000565511 DCDC1P59894 354 aa23.46■■□□□ 1.35
RAB40C-209ENST00000565511 GPLD1P80108 840 aa23.46■■□□□ 1.35
RAB40C-209ENST00000565511 WASHC5Q12768 1159 aa23.46■■□□□ 1.35
RAB40C-209ENST00000565511 CRTC3Q6UUV7 619 aa23.46■■□□□ 1.35
RAB40C-209ENST00000565511 RHOT1Q8IXI2 618 aa23.46■■□□□ 1.35
RAB40C-209ENST00000565511 AGBL5Q8NDL9 886 aa23.46■■□□□ 1.35
RAB40C-209ENST00000565511 BOD1L1Q8NFC6 3051 aa23.46■■□□□ 1.35
RAB40C-209ENST00000565511 TBC1D10AQ9BXI6 508 aa23.46■■□□□ 1.35
RAB40C-209ENST00000565511 MAK16Q9BXY0 300 aaKnown RBP23.46■■□□□ 1.35
RAB40C-209ENST00000565511 B3GNT4Q9C0J1 378 aa23.46■■□□□ 1.35
RAB40C-209ENST00000565511 RMI1Q9H9A7 625 aa23.46■■□□□ 1.35
RAB40C-209ENST00000565511 MAGEE1Q9HCI5 957 aa23.46■■□□□ 1.35
RAB40C-209ENST00000565511 AKAP7Q9P0M2 348 aaPredicted RBP23.46■■□□□ 1.35
RAB40C-209ENST00000565511 NFKBIL1Q9UBC1 381 aaPredicted RBP23.46■■□□□ 1.35
RAB40C-209ENST00000565511 PCDHGA3Q9Y5H0 932 aa23.46■■□□□ 1.35
RAB40C-209ENST00000565511 FLNBO75369 2602 aaKnown RBP23.45■■□□□ 1.34
RAB40C-209ENST00000565511 EFCAB7A8K855 629 aa23.45■■□□□ 1.34
RAB40C-209ENST00000565511 A8MU76 341 aa23.45■■□□□ 1.34
RAB40C-209ENST00000565511 PMPCBO75439 489 aa23.45■■□□□ 1.34
RAB40C-209ENST00000565511 PTMSP20962 102 aa23.45■■□□□ 1.34
RAB40C-209ENST00000565511 CD82P27701 267 aa23.45■■□□□ 1.34
RAB40C-209ENST00000565511 UBE2IP63279 158 aaKnown RBP23.45■■□□□ 1.34
RAB40C-209ENST00000565511 TEX44Q53QW1 395 aa23.45■■□□□ 1.34
RAB40C-209ENST00000565511 KDELC1Q6UW63 502 aa23.45■■□□□ 1.34
RAB40C-209ENST00000565511 FAM129CQ86XR2 697 aa23.45■■□□□ 1.34
RAB40C-209ENST00000565511 NKD1Q969G9 470 aa23.45■■□□□ 1.34
RAB40C-209ENST00000565511 GLYATL1Q969I3 302 aa23.45■■□□□ 1.34
RAB40C-209ENST00000565511 ZMYND15Q9H091 742 aa23.45■■□□□ 1.34
RAB40C-209ENST00000565511 PRR19A6NJB7 356 aa23.44■■□□□ 1.34
RAB40C-209ENST00000565511 ZW10O43264 779 aa23.44■■□□□ 1.34
RAB40C-209ENST00000565511 DUX1O43812 170 aa23.44■■□□□ 1.34
RAB40C-209ENST00000565511 SLC25A14O95258 325 aaPredicted RBP23.44■■□□□ 1.34
RAB40C-209ENST00000565511 NDST3O95803 873 aa23.44■■□□□ 1.34
RAB40C-209ENST00000565511 F3P13726 295 aa23.44■■□□□ 1.34
RAB40C-209ENST00000565511 ZFXP17010 805 aaPredicted RBP23.44■■□□□ 1.34
RAB40C-209ENST00000565511 CSTF2P33240 577 aaKnown RBP eCLIP23.44■■□□□ 1.34
RAB40C-209ENST00000565511 CA5AP35218 305 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms