RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 ATP13A5Q4VNC0 1218 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 TAF1BQ53T94 588 aaPredicted RBP12.72□□□□□ -0.37
CLK3-214ENST00000564096 CCDC91Q7Z6B0 441 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 PIANPQ8IYJ0 282 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 LPGAT1Q92604 370 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 SCAMP4Q969E2 229 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 GLYATL1Q969I3 302 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 TOE1Q96GM8 510 aaKnown RBP12.72□□□□□ -0.37
CLK3-214ENST00000564096 ELMO2Q96JJ3 720 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 CABS1Q96KC9 395 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 SMC6Q96SB8 1091 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 C1QTNF2Q9BXJ5 285 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 TPSD1Q9BZJ3 242 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 PCED1AQ9H1Q7 454 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 FAM96AQ9H5X1 160 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 UGT1A7Q9HAW7 530 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 UGT1A10Q9HAW8 530 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 UGT1A8Q9HAW9 530 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 ZDHHC3Q9NYG2 299 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 ACTL7BQ9Y614 415 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 AGAP14A8MT82 685 aa12.71□□□□□ -0.37
CLK3-214ENST00000564096 E5RI56 91 aa12.71□□□□□ -0.37
CLK3-214ENST00000564096 AXIN1O15169 862 aa12.71□□□□□ -0.37
CLK3-214ENST00000564096 GPR39O43194 453 aa12.71□□□□□ -0.37
CLK3-214ENST00000564096 LAMTOR5O43504 91 aa12.71□□□□□ -0.37
CLK3-214ENST00000564096 VPS26AO75436 327 aa12.71□□□□□ -0.37
CLK3-214ENST00000564096 FAM155BO75949 473 aa12.71□□□□□ -0.37
CLK3-214ENST00000564096 S1PR4O95977 384 aa12.71□□□□□ -0.37
CLK3-214ENST00000564096 AHSGP02765 367 aa12.71□□□□□ -0.37
CLK3-214ENST00000564096 AKT2P31751 481 aa12.71□□□□□ -0.37
CLK3-214ENST00000564096 ACSL1P33121 698 aa12.71□□□□□ -0.37
CLK3-214ENST00000564096 CCR5P51681 352 aa12.71□□□□□ -0.37
CLK3-214ENST00000564096 PPP2CBP62714 309 aa12.71□□□□□ -0.37
CLK3-214ENST00000564096 PPP2CAP67775 309 aa12.71□□□□□ -0.37
CLK3-214ENST00000564096 POU4F1Q01851 419 aa12.71□□□□□ -0.37
CLK3-214ENST00000564096 USP10Q14694 798 aaKnown RBP12.71□□□□□ -0.37
CLK3-214ENST00000564096 IRF4Q15306 451 aa12.71□□□□□ -0.37
CLK3-214ENST00000564096 USP39Q53GS9 565 aaKnown RBP12.71□□□□□ -0.37
CLK3-214ENST00000564096 GPRC6AQ5T6X5 926 aa12.71□□□□□ -0.37
CLK3-214ENST00000564096 MROH9Q5TGP6 573 aa12.71□□□□□ -0.37
CLK3-214ENST00000564096 KIAA0895LQ68EN5 471 aa12.71□□□□□ -0.37
CLK3-214ENST00000564096 ADAMTSL4Q6UY14 1074 aa12.71□□□□□ -0.37
CLK3-214ENST00000564096 SLC36A4Q6YBV0 504 aa12.71□□□□□ -0.37
CLK3-214ENST00000564096 RFLNAQ6ZTI6 216 aa12.71□□□□□ -0.37
CLK3-214ENST00000564096 LDB1Q86U70 411 aaPredicted RBP12.71□□□□□ -0.37
CLK3-214ENST00000564096 SRRM1Q8IYB3 904 aaKnown RBP12.71□□□□□ -0.37
CLK3-214ENST00000564096 ACMSDQ8TDX5 336 aa12.71□□□□□ -0.37
CLK3-214ENST00000564096 BTN2A2Q8WVV5 523 aa12.71□□□□□ -0.37
CLK3-214ENST00000564096 ALKBH8Q96BT7 664 aaKnown RBP12.71□□□□□ -0.37
CLK3-214ENST00000564096 TSNARE1Q96NA8 513 aa12.71□□□□□ -0.37
CLK3-214ENST00000564096 SLC17A9Q9BYT1 436 aa12.71□□□□□ -0.37
CLK3-214ENST00000564096 WDR26Q9H7D7 661 aa12.71□□□□□ -0.37
CLK3-214ENST00000564096 PRMT8Q9NR22 394 aaPredicted RBP12.71□□□□□ -0.37
CLK3-214ENST00000564096 PHPT1Q9NRX4 125 aaPredicted RBP12.71□□□□□ -0.37
CLK3-214ENST00000564096 C2orf42Q9NWW7 574 aa12.71□□□□□ -0.37
CLK3-214ENST00000564096 DLGAP2Q9P1A6 1054 aa12.71□□□□□ -0.37
CLK3-214ENST00000564096 ZFR2Q9UPR6 939 aaKnown RBP12.71□□□□□ -0.37
CLK3-214ENST00000564096 DMTF1Q9Y222 760 aa12.71□□□□□ -0.37
CLK3-214ENST00000564096 PLXNA2O75051 1894 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 IGHV1OR15-9A0A0B4J2B8 117 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 CCDC163A0A0D9SF12 145 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 FADS2P1A8MWK0 482 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 TPP1O14773 563 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 HAUS5O94927 633 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 AP2A2O94973 939 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 SLC25A14O95258 325 aaPredicted RBP12.7□□□□□ -0.38
CLK3-214ENST00000564096 PDGFBP01127 241 aaPredicted RBP12.7□□□□□ -0.38
CLK3-214ENST00000564096 OR56A5P0C7T3 313 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 PRSS56P0CW18 603 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 PKMP14618 531 aaKnown RBP12.7□□□□□ -0.38
CLK3-214ENST00000564096 STMN1P16949 149 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 UGT1A6P19224 532 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 UGT1A1P22309 533 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 UGT1A4P22310 534 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 HNRNPA2B1P22626 353 aaKnown RBP12.7□□□□□ -0.38
CLK3-214ENST00000564096 CRABP2P29373 138 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 TYK2P29597 1187 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 MAT2AP31153 395 aaKnown RBP12.7□□□□□ -0.38
CLK3-214ENST00000564096 HOXA6P31267 233 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 UGT1A3P35503 534 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 UGT1A5P35504 534 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 ABCG1P45844 678 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 CDKN1CP49918 316 aaPredicted RBP12.7□□□□□ -0.38
CLK3-214ENST00000564096 HECTD2Q5U5R9 776 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 PTRHD1Q6GMV3 140 aaKnown RBP12.7□□□□□ -0.38
CLK3-214ENST00000564096 UGT3A1Q6NUS8 523 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 CNSTQ6PJW8 725 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 TIFABQ6ZNK6 161 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 RAPH1Q70E73 1250 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 TRABD2AQ86V40 505 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 C11orf74Q86VG3 221 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 DCLK2Q8N568 766 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 TP53I13Q8NBR0 393 aaPredicted RBP12.7□□□□□ -0.38
CLK3-214ENST00000564096 KCNJ9Q92806 393 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 ISL2Q96A47 359 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 PANX3Q96QZ0 392 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 MCMBPQ9BTE3 642 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 IQCGQ9H095 443 aaKnown RBP12.7□□□□□ -0.38
CLK3-214ENST00000564096 POPDC3Q9HBV1 291 aa12.7□□□□□ -0.38
CLK3-214ENST00000564096 CD93Q9NPY3 652 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms