RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 SLC30A1Q9Y6M5 507 aa21.49■■□□□ 1.03
SNX1-206ENST00000559389 TRBV5-4A0A0C4DH59 114 aa21.48■■□□□ 1.03
SNX1-206ENST00000559389 PRSS38A1L453 326 aa21.48■■□□□ 1.03
SNX1-206ENST00000559389 OR51F1A6NGY5 319 aa21.48■■□□□ 1.03
SNX1-206ENST00000559389 E7ESA3 106 aa21.48■■□□□ 1.03
SNX1-206ENST00000559389 YKT6O15498 198 aa21.48■■□□□ 1.03
SNX1-206ENST00000559389 SLC25A14O95258 325 aaPredicted RBP21.48■■□□□ 1.03
SNX1-206ENST00000559389 RASGRP1O95267 797 aa21.48■■□□□ 1.03
SNX1-206ENST00000559389 CEACAM5P06731 702 aa21.48■■□□□ 1.03
SNX1-206ENST00000559389 ARNTP27540 789 aa21.48■■□□□ 1.03
SNX1-206ENST00000559389 EPHA8P29322 1005 aaPredicted RBP21.48■■□□□ 1.03
SNX1-206ENST00000559389 ARRB1P49407 418 aaPredicted RBP21.48■■□□□ 1.03
SNX1-206ENST00000559389 SRP54P61011 504 aaKnown RBP21.48■■□□□ 1.03
SNX1-206ENST00000559389 PRAMEP78395 509 aa21.48■■□□□ 1.03
SNX1-206ENST00000559389 PPARDQ03181 441 aa21.48■■□□□ 1.03
SNX1-206ENST00000559389 CACNG1Q06432 222 aa21.48■■□□□ 1.03
SNX1-206ENST00000559389 BBS9Q3SYG4 887 aa21.48■■□□□ 1.03
SNX1-206ENST00000559389 KHDC1Q4VXA5 237 aaKnown RBP21.48■■□□□ 1.03
SNX1-206ENST00000559389 ZNF542PQ5EBM4 170 aa21.48■■□□□ 1.03
SNX1-206ENST00000559389 PRAMEF14Q5SWL7 426 aa21.48■■□□□ 1.03
SNX1-206ENST00000559389 GPRC6AQ5T6X5 926 aa21.48■■□□□ 1.03
SNX1-206ENST00000559389 KIAA0930Q6ICG6 404 aaPredicted RBP21.48■■□□□ 1.03
SNX1-206ENST00000559389 TMEM135Q86UB9 458 aa21.48■■□□□ 1.03
SNX1-206ENST00000559389 ZNF669Q96BR6 464 aaPredicted RBP21.48■■□□□ 1.03
SNX1-206ENST00000559389 ULK4Q96C45 1275 aa21.48■■□□□ 1.03
SNX1-206ENST00000559389 LRRC39Q96DD0 335 aa21.48■■□□□ 1.03
SNX1-206ENST00000559389 SCARF2Q96GP6 870 aaPredicted RBP21.48■■□□□ 1.03
SNX1-206ENST00000559389 SGSM3Q96HU1 749 aa21.48■■□□□ 1.03
SNX1-206ENST00000559389 CAAP1Q9H8G2 361 aa21.48■■□□□ 1.03
SNX1-206ENST00000559389 TMEM9BQ9NQ34 198 aa21.48■■□□□ 1.03
SNX1-206ENST00000559389 KLF15Q9UIH9 416 aa21.48■■□□□ 1.03
SNX1-206ENST00000559389 CRLS1Q9UJA2 301 aa21.48■■□□□ 1.03
SNX1-206ENST00000559389 MAD1L1Q9Y6D9 718 aa21.48■■□□□ 1.03
SNX1-206ENST00000559389 DGKBQ9Y6T7 804 aa21.48■■□□□ 1.03
SNX1-206ENST00000559389 MYO15AQ9UKN7 3530 aa21.47■■□□□ 1.03
SNX1-206ENST00000559389 MAGEB16A2A368 324 aa21.47■■□□□ 1.03
SNX1-206ENST00000559389 H3BM21 787 aa21.47■■□□□ 1.03
SNX1-206ENST00000559389 GOT2P00505 430 aaKnown RBP21.47■■□□□ 1.03
SNX1-206ENST00000559389 IVLP07476 585 aa21.47■■□□□ 1.03
SNX1-206ENST00000559389 ZNF883P0CG24 379 aa21.47■■□□□ 1.03
SNX1-206ENST00000559389 PGAM1P18669 254 aa21.47■■□□□ 1.03
SNX1-206ENST00000559389 GPR33Q49SQ1 333 aa21.47■■□□□ 1.03
SNX1-206ENST00000559389 ZRANB3Q5FWF4 1079 aa21.47■■□□□ 1.03
SNX1-206ENST00000559389 CES3Q6UWW8 571 aa21.47■■□□□ 1.03
SNX1-206ENST00000559389 RBFAQ8N0V3 343 aa21.47■■□□□ 1.03
SNX1-206ENST00000559389 NXPE1Q8N323 547 aa21.47■■□□□ 1.03
SNX1-206ENST00000559389 FBXO25Q8TCJ0 367 aa21.47■■□□□ 1.03
SNX1-206ENST00000559389 TSACCQ96A04 125 aaPredicted RBP21.47■■□□□ 1.03
SNX1-206ENST00000559389 EBNA1BP2Q99848 306 aaKnown RBP21.47■■□□□ 1.03
SNX1-206ENST00000559389 PHACTR1Q9C0D0 580 aa21.47■■□□□ 1.03
SNX1-206ENST00000559389 EPB41L5Q9HCM4 733 aa21.47■■□□□ 1.03
SNX1-206ENST00000559389 TRIM39Q9HCM9 518 aa21.47■■□□□ 1.03
SNX1-206ENST00000559389 MRPL40Q9NQ50 206 aaKnown RBP21.47■■□□□ 1.03
SNX1-206ENST00000559389 APOBEC3BQ9UH17 382 aaKnown RBP21.47■■□□□ 1.03
SNX1-206ENST00000559389 TMEM98Q9Y2Y6 226 aa21.47■■□□□ 1.03
SNX1-206ENST00000559389 RPS6KL1Q9Y6S9 549 aa21.47■■□□□ 1.03
SNX1-206ENST00000559389 GDF9O60383 454 aa21.46■■□□□ 1.03
SNX1-206ENST00000559389 MTX2O75431 263 aa21.46■■□□□ 1.03
SNX1-206ENST00000559389 PIAS2O75928 621 aa21.46■■□□□ 1.03
SNX1-206ENST00000559389 USP1O94782 785 aa21.46■■□□□ 1.03
SNX1-206ENST00000559389 PRSS56P0CW18 603 aa21.46■■□□□ 1.03
SNX1-206ENST00000559389 JUNDP17535 347 aa21.46■■□□□ 1.03
SNX1-206ENST00000559389 POLD2P49005 469 aa21.46■■□□□ 1.03
SNX1-206ENST00000559389 HK3P52790 923 aa21.46■■□□□ 1.03
SNX1-206ENST00000559389 PLTPP55058 493 aa21.46■■□□□ 1.03
SNX1-206ENST00000559389 HNRNPKP61978 463 aaKnown RBP eCLIP21.46■■□□□ 1.03
SNX1-206ENST00000559389 IL9RQ01113 521 aa21.46■■□□□ 1.03
SNX1-206ENST00000559389 ANKRD20A4Q4UJ75 823 aa21.46■■□□□ 1.03
SNX1-206ENST00000559389 LDLRAP1Q5SW96 308 aa21.46■■□□□ 1.03
SNX1-206ENST00000559389 ZNF648Q5T619 568 aaPredicted RBP21.46■■□□□ 1.03
SNX1-206ENST00000559389 PSAPL1Q6NUJ1 521 aa21.46■■□□□ 1.03
SNX1-206ENST00000559389 ADGRG6Q86SQ4 1221 aa21.46■■□□□ 1.03
SNX1-206ENST00000559389 HID1Q8IV36 788 aa21.46■■□□□ 1.03
SNX1-206ENST00000559389 KIAA2013Q8IYS2 634 aa21.46■■□□□ 1.03
SNX1-206ENST00000559389 NAT9Q9BTE0 207 aa21.46■■□□□ 1.03
SNX1-206ENST00000559389 FAM129AQ9BZQ8 928 aa21.46■■□□□ 1.03
SNX1-206ENST00000559389 TCEAL2Q9H3H9 227 aaPredicted RBP21.46■■□□□ 1.03
SNX1-206ENST00000559389 FAM96AQ9H5X1 160 aa21.46■■□□□ 1.03
SNX1-206ENST00000559389 ARFGAP3Q9NP61 516 aa21.46■■□□□ 1.03
SNX1-206ENST00000559389 FAM114A2Q9NRY5 505 aa21.46■■□□□ 1.03
SNX1-206ENST00000559389 ZDHHC18Q9NUE0 388 aa21.46■■□□□ 1.03
SNX1-206ENST00000559389 ATXN10Q9UBB4 475 aa21.46■■□□□ 1.03
SNX1-206ENST00000559389 TEX264Q9Y6I9 313 aa21.46■■□□□ 1.03
SNX1-206ENST00000559389 ZCWPW2A0A1B0GU75 182 aa21.45■■□□□ 1.02
SNX1-206ENST00000559389 GPR89AB7ZAQ6 455 aa21.45■■□□□ 1.02
SNX1-206ENST00000559389 VEGFDO43915 354 aa21.45■■□□□ 1.02
SNX1-206ENST00000559389 DNAJC6O75061 913 aa21.45■■□□□ 1.02
SNX1-206ENST00000559389 ASMTLO95671 621 aa21.45■■□□□ 1.02
SNX1-206ENST00000559389 FUCA1P04066 466 aa21.45■■□□□ 1.02
SNX1-206ENST00000559389 GPR89BP0CG08 455 aa21.45■■□□□ 1.02
SNX1-206ENST00000559389 PAMP19021 973 aa21.45■■□□□ 1.02
SNX1-206ENST00000559389 ELK3P41970 407 aa21.45■■□□□ 1.02
SNX1-206ENST00000559389 CDKN1CP49918 316 aaPredicted RBP21.45■■□□□ 1.02
SNX1-206ENST00000559389 BLKP51451 505 aa21.45■■□□□ 1.02
SNX1-206ENST00000559389 PDIA2Q13087 525 aaKnown RBP21.45■■□□□ 1.02
SNX1-206ENST00000559389 CENPUQ71F23 418 aa21.45■■□□□ 1.02
SNX1-206ENST00000559389 KANSL1Q7Z3B3 1105 aa21.45■■□□□ 1.02
SNX1-206ENST00000559389 IGDCC3Q8IVU1 814 aa21.45■■□□□ 1.02
SNX1-206ENST00000559389 PIANPQ8IYJ0 282 aa21.45■■□□□ 1.02
SNX1-206ENST00000559389 OR6P1Q8NGX9 317 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms