RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 SENP1Q9P0U3 644 aa11.12□□□□□ -0.63
SHMT2-220ENST00000555634 DLGAP2Q9P1A6 1054 aa11.12□□□□□ -0.63
SHMT2-220ENST00000555634 TNRC6BQ9UPQ9 1833 aaKnown RBP11.12□□□□□ -0.63
SHMT2-220ENST00000555634 A0A0U1RQS6 177 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 OR51F1A6NGY5 319 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 K7ESF4 209 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 SLC31A1O15431 190 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 MAGEC1O60732 1142 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 VPS26AO75436 327 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 TCEA3O75764 348 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 FTH1P02794 183 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 ESR1P03372 595 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 SHBGP04278 402 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 SNRPAP09012 282 aaKnown RBP11.11□□□□□ -0.63
SHMT2-220ENST00000555634 OR56A5P0C7T3 313 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 MYCLP1P12525 358 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-220ENST00000555634 CNR2P34972 360 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 DPP6P42658 865 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 SLCO1A2P46721 670 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 POLD2P49005 469 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 PXNP49023 591 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-220ENST00000555634 KPNA2P52292 529 aaKnown RBP11.11□□□□□ -0.63
SHMT2-220ENST00000555634 THOP1P52888 689 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 NUBP1P53384 320 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 LIMK2P53671 638 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 PPP2CBP62714 309 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 PPP2CAP67775 309 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 ZNF844Q08AG5 666 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 PEX6Q13608 980 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 RASA2Q15283 850 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 ATP13A5Q4VNC0 1218 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 WDR45BQ5MNZ6 344 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 TEDDM1Q5T9Z0 273 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 FAM45BPQ6NSW5 357 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 PNCKQ6P2M8 343 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 ZC3H14Q6PJT7 736 aaKnown RBP11.11□□□□□ -0.63
SHMT2-220ENST00000555634 TECPR1Q7Z6L1 1165 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 HEATR4Q86WZ0 1026 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 TDRPQ86YL5 185 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 DDHD1Q8NEL9 900 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 FAM45AQ8TCE6 357 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 EPS8L3Q8TE67 593 aaKnown RBP11.11□□□□□ -0.63
SHMT2-220ENST00000555634 BTN2A2Q8WVV5 523 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 SCAMP4Q969E2 229 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 ATXN7L3BQ96GX2 97 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 ELMO2Q96JJ3 720 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 CABS1Q96KC9 395 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 LENG8Q96PV6 779 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-220ENST00000555634 AGAP2Q99490 1192 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 TMEM109Q9BVC6 243 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 IQCGQ9H095 443 aaKnown RBP11.11□□□□□ -0.63
SHMT2-220ENST00000555634 MED4Q9NPJ6 270 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 FBXO6Q9NRD1 293 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-220ENST00000555634 AASDHPPTQ9NRN7 309 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 WSB2Q9NYS7 404 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-220ENST00000555634 DOCK9Q9BZ29 2069 aa11.11□□□□□ -0.63
SHMT2-220ENST00000555634 ZFC3H1O60293 1989 aaKnown RBP11.1□□□□□ -0.63
SHMT2-220ENST00000555634 LRP4O75096 1905 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 KLHL33A6NCF5 533 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 PABPN1LA6NDY0 278 aaKnown RBP11.1□□□□□ -0.63
SHMT2-220ENST00000555634 PRMT5O14744 637 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-220ENST00000555634 KPNA5O15131 536 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 INPP4BO15327 924 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 LATO43561 262 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 PI15O43692 258 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 VEGFDO43915 354 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 AP2A2O94973 939 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 ASMTLO95671 621 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 PAK4O96013 591 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-220ENST00000555634 ITGA2BP08514 1039 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 GSTM1P09488 218 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 VCLP18206 1134 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 ARNTP27540 789 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 RABIFP47224 123 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 LEPRP48357 1165 aaKnown RBP11.1□□□□□ -0.63
SHMT2-220ENST00000555634 ADARP55265 1226 aaKnown RBP11.1□□□□□ -0.63
SHMT2-220ENST00000555634 XIAPP98170 497 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 MPP1Q00013 466 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 GSTM4Q03013 218 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 DNAJC3Q13217 504 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 CTBP1Q13363 440 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 PTK2BQ14289 1009 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 TTLL9Q3SXZ7 439 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 SYTL3Q4VX76 610 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 GPRC6AQ5T6X5 926 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 PSAPL1Q6NUJ1 521 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 RAPH1Q70E73 1250 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 CEP68Q76N32 757 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 DENND6AQ8IWF6 608 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 UNC5BQ8IZJ1 945 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 RGL4Q8IZJ4 473 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 TMEM105Q8N8V8 129 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 OR2W6PQ8NHA6 318 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 RLN3Q8WXF3 142 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 KLK6Q92876 244 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 EID2BQ96D98 161 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 SERAC1Q96JX3 654 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 HSPA12BQ96MM6 686 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 MYOCQ99972 504 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 EPB41L4BQ9H329 900 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms