RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 TMEM236Q5W0B7 351 aa11.52□□□□□ -0.57
PPFIA2-227ENST00000552948 TIGD7Q6NT04 549 aaPredicted RBP11.52□□□□□ -0.57
PPFIA2-227ENST00000552948 CCDC80Q76M96 950 aa11.52□□□□□ -0.57
PPFIA2-227ENST00000552948 LRRC8DQ7L1W4 858 aa11.52□□□□□ -0.57
PPFIA2-227ENST00000552948 BTLAQ7Z6A9 289 aa11.52□□□□□ -0.57
PPFIA2-227ENST00000552948 METTL23Q86XA0 190 aa11.52□□□□□ -0.57
PPFIA2-227ENST00000552948 SYTL1Q8IYJ3 562 aa11.52□□□□□ -0.57
PPFIA2-227ENST00000552948 CCDC97Q96F63 343 aaPredicted RBP11.52□□□□□ -0.57
PPFIA2-227ENST00000552948 NANOGQ9H9S0 305 aa11.52□□□□□ -0.57
PPFIA2-227ENST00000552948 WDR6Q9NNW5 1121 aaKnown RBP11.52□□□□□ -0.57
PPFIA2-227ENST00000552948 NDUFS2O75306 463 aa11.52□□□□□ -0.57
PPFIA2-227ENST00000552948 MRPS15P82914 257 aaKnown RBP11.52□□□□□ -0.57
PPFIA2-227ENST00000552948 FPGSQ05932 587 aa11.52□□□□□ -0.57
PPFIA2-227ENST00000552948 RAD51Q06609 339 aa11.52□□□□□ -0.57
PPFIA2-227ENST00000552948 SPCS2Q15005 226 aa11.52□□□□□ -0.57
PPFIA2-227ENST00000552948 LCN8Q6JVE9 175 aa11.52□□□□□ -0.57
PPFIA2-227ENST00000552948 GCNT7Q6ZNI0 430 aa11.52□□□□□ -0.57
PPFIA2-227ENST00000552948 SCAMP5Q8TAC9 235 aa11.52□□□□□ -0.57
PPFIA2-227ENST00000552948 GAD1Q99259 594 aa11.52□□□□□ -0.57
PPFIA2-227ENST00000552948 EGFL8Q99944 293 aa11.52□□□□□ -0.57
PPFIA2-227ENST00000552948 NEURL2Q9BR09 285 aa11.52□□□□□ -0.57
PPFIA2-227ENST00000552948 SCN3BQ9NY72 215 aa11.52□□□□□ -0.57
PPFIA2-227ENST00000552948 KIF17Q9P2E2 1029 aa11.52□□□□□ -0.57
PPFIA2-227ENST00000552948 AASSQ9UDR5 926 aa11.52□□□□□ -0.57
PPFIA2-227ENST00000552948 ADGRE2Q9UHX3 823 aa11.52□□□□□ -0.57
PPFIA2-227ENST00000552948 PCDHB3Q9Y5E6 796 aa11.52□□□□□ -0.57
PPFIA2-227ENST00000552948 RBM47A0AV96 593 aaKnown RBP11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 H0Y858 1186 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 I6L893 689 aaPredicted RBP11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 ZNF701M0R085 212 aaPredicted RBP11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 MATN3O15232 486 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 BCAS1O75363 584 aaPredicted RBP11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 INMTO95050 263 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 OXSR1O95747 527 aaPredicted RBP11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 C1RP00736 705 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 CTSHP09668 335 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 AGXTP21549 392 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 EDNRBP24530 442 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 CCNCP24863 283 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 ARHGDIAP52565 204 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 TMBIM6P55061 237 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 VBP1P61758 197 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 DAB2P98082 770 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 PLA2G4EQ3MJ16 856 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 ISCA2Q86U28 154 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 STAG3L4Q8TBR4 150 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 NTAN1Q96AB6 310 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 PTERQ96BW5 349 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 ITCHQ96J02 903 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 SMOQ99835 787 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 ASPSCR1Q9BZE9 553 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 MARCH7Q9H992 704 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 ZFP14Q9HCL3 533 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 GALPQ9UBC7 116 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 A0A1W2PP18 115 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 CNTN5O94779 1100 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 STAU1O95793 577 aaKnown RBP11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 GUCA1CO95843 209 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 FADS2O95864 444 aaKnown RBP11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 ARNTP27540 789 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 FMO3P31513 532 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 RENBPP51606 427 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 ARPP19P56211 112 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 INTS6LQ5JSJ4 861 aaKnown RBP11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 OTUD1Q5VV17 481 aaPredicted RBP11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 KIAA0408Q6ZU52 694 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 SLC22A16Q86VW1 577 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 MINDY1Q8N5J2 469 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 OR10A6Q8NH74 314 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 CHPT1Q8WUD6 406 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 CORO1BQ9BR76 489 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 ITM2CQ9NQX7 267 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 RASSF1Q9NS23 344 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 NDFIP2Q9NV92 336 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 TNPO2O14787 897 aaKnown RBP11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 OR4F21O95013 312 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 MFN2O95140 757 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 ZBTB7AO95365 584 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 KRT8P05787 483 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 HSD17B1P14061 328 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 ALOX12P18054 663 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 IGFBP6P24592 240 aaPredicted RBP11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 HPCAL1P37235 193 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 ARCN1P48444 511 aaKnown RBP11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 POLD2P49005 469 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 FAM117BQ6P1L5 589 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 EID3Q8N140 333 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 SCAIQ8N9R8 606 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 PNPT1Q8TCS8 783 aaKnown RBP11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 TRIM54Q9BYV2 358 aa11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 WDR12Q9GZL7 423 aaKnown RBP11.51□□□□□ -0.57
PPFIA2-227ENST00000552948 AHDC1Q5TGY3 1603 aaPredicted RBP11.5□□□□□ -0.57
PPFIA2-227ENST00000552948 NRCAMQ92823 1304 aa11.5□□□□□ -0.57
PPFIA2-227ENST00000552948 PSMD11O00231 422 aa11.5□□□□□ -0.57
PPFIA2-227ENST00000552948 FFAR3O14843 346 aa11.5□□□□□ -0.57
PPFIA2-227ENST00000552948 CD3EAPO15446 510 aaKnown RBP11.5□□□□□ -0.57
PPFIA2-227ENST00000552948 GPR42O15529 346 aa11.5□□□□□ -0.57
PPFIA2-227ENST00000552948 FKBP9O95302 570 aa11.5□□□□□ -0.57
PPFIA2-227ENST00000552948 DBTP11182 482 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms