RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 CORO1CQ9ULV4 474 aaPredicted RBP20.8■□□□□ 0.92
PRDM4-205ENST00000550376 SORCS3Q9UPU3 1222 aa20.8■□□□□ 0.92
PRDM4-205ENST00000550376 ASB1Q9Y576 335 aa20.8■□□□□ 0.92
PRDM4-205ENST00000550376 OAS3Q9Y6K5 1087 aaKnown RBP20.8■□□□□ 0.92
PRDM4-205ENST00000550376 VPS26AO75436 327 aa20.8■□□□□ 0.92
PRDM4-205ENST00000550376 CACNG1Q06432 222 aa20.8■□□□□ 0.92
PRDM4-205ENST00000550376 MESP2Q0VG99 397 aa20.8■□□□□ 0.92
PRDM4-205ENST00000550376 GEN1Q17RS7 908 aa20.8■□□□□ 0.92
PRDM4-205ENST00000550376 TCEAL5Q5H9L2 206 aa20.8■□□□□ 0.92
PRDM4-205ENST00000550376 SLC22A9Q8IVM8 553 aa20.8■□□□□ 0.92
PRDM4-205ENST00000550376 FUBP1Q96AE4 644 aaKnown RBP20.8■□□□□ 0.92
PRDM4-205ENST00000550376 SYTL2Q9HCH5 934 aa20.8■□□□□ 0.92
PRDM4-205ENST00000550376 SEMA4BQ9NPR2 832 aaPredicted RBP20.8■□□□□ 0.92
PRDM4-205ENST00000550376 CD84Q9UIB8 345 aa20.8■□□□□ 0.92
PRDM4-205ENST00000550376 TRAF6Q9Y4K3 522 aa20.8■□□□□ 0.92
PRDM4-205ENST00000550376 ALPK3Q96L96 1907 aa20.79■□□□□ 0.92
PRDM4-205ENST00000550376 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.79■□□□□ 0.92
PRDM4-205ENST00000550376 AIM2O14862 343 aa20.79■□□□□ 0.92
PRDM4-205ENST00000550376 PDE5AO76074 875 aa20.79■□□□□ 0.92
PRDM4-205ENST00000550376 PENKP01210 267 aaPredicted RBP20.79■□□□□ 0.92
PRDM4-205ENST00000550376 CHRM1P11229 460 aaPredicted RBP20.79■□□□□ 0.92
PRDM4-205ENST00000550376 PIK3R1P27986 724 aa20.79■□□□□ 0.92
PRDM4-205ENST00000550376 SNRPD1P62314 119 aaKnown RBP20.79■□□□□ 0.92
PRDM4-205ENST00000550376 ECT2LQ008S8 904 aa20.79■□□□□ 0.92
PRDM4-205ENST00000550376 ULK2Q8IYT8 1036 aa20.79■□□□□ 0.92
PRDM4-205ENST00000550376 GPR26Q8NDV2 337 aa20.79■□□□□ 0.92
PRDM4-205ENST00000550376 KIAA1191Q96A73 305 aa20.79■□□□□ 0.92
PRDM4-205ENST00000550376 C3orf30Q96M34 536 aa20.79■□□□□ 0.92
PRDM4-205ENST00000550376 VTI1BQ9UEU0 232 aa20.79■□□□□ 0.92
PRDM4-205ENST00000550376 H7C0S8 307 aa20.79■□□□□ 0.92
PRDM4-205ENST00000550376 ATP5BP06576 529 aaKnown RBP20.79■□□□□ 0.92
PRDM4-205ENST00000550376 EEF1DP29692 281 aaKnown RBP20.79■□□□□ 0.92
PRDM4-205ENST00000550376 HK3P52790 923 aa20.79■□□□□ 0.92
PRDM4-205ENST00000550376 TBCCQ15814 346 aa20.79■□□□□ 0.92
PRDM4-205ENST00000550376 ZNF77Q15935 545 aa20.79■□□□□ 0.92
PRDM4-205ENST00000550376 C18orf21Q32NC0 220 aaPredicted RBP20.79■□□□□ 0.92
PRDM4-205ENST00000550376 PRSS36Q5K4E3 855 aa20.79■□□□□ 0.92
PRDM4-205ENST00000550376 LRRC66Q68CR7 880 aa20.79■□□□□ 0.92
PRDM4-205ENST00000550376 SNX32Q86XE0 403 aa20.79■□□□□ 0.92
PRDM4-205ENST00000550376 SCUBE1Q8IWY4 988 aa20.79■□□□□ 0.92
PRDM4-205ENST00000550376 DTX3LQ8TDB6 740 aa20.79■□□□□ 0.92
PRDM4-205ENST00000550376 ZNF707Q96C28 371 aaPredicted RBP20.79■□□□□ 0.92
PRDM4-205ENST00000550376 CIPCQ9C0C6 399 aa20.79■□□□□ 0.92
PRDM4-205ENST00000550376 SUV39H2Q9H5I1 410 aa20.79■□□□□ 0.92
PRDM4-205ENST00000550376 FBRSL1Q9HCM7 1045 aaKnown RBP20.79■□□□□ 0.92
PRDM4-205ENST00000550376 MID1IP1Q9NPA3 183 aa20.79■□□□□ 0.92
PRDM4-205ENST00000550376 SLC7A8Q9UHI5 535 aa20.79■□□□□ 0.92
PRDM4-205ENST00000550376 HS3ST2Q9Y278 367 aa20.79■□□□□ 0.92
PRDM4-205ENST00000550376 MRPS23Q9Y3D9 190 aaKnown RBP20.79■□□□□ 0.92
PRDM4-205ENST00000550376 F8W8V4 182 aa20.78■□□□□ 0.92
PRDM4-205ENST00000550376 KRT36O76013 467 aa20.78■□□□□ 0.92
PRDM4-205ENST00000550376 TRIM16O95361 564 aa20.78■□□□□ 0.92
PRDM4-205ENST00000550376 LHCGRP22888 699 aa20.78■□□□□ 0.92
PRDM4-205ENST00000550376 NFATC2Q13469 925 aa20.78■□□□□ 0.92
PRDM4-205ENST00000550376 CYHR1Q6ZMK1 362 aa20.78■□□□□ 0.92
PRDM4-205ENST00000550376 STAG3L4Q8TBR4 150 aa20.78■□□□□ 0.92
PRDM4-205ENST00000550376 RSPRY1Q96DX4 576 aa20.78■□□□□ 0.92
PRDM4-205ENST00000550376 DERL2Q9GZP9 239 aa20.78■□□□□ 0.92
PRDM4-205ENST00000550376 TFB2MQ9H5Q4 396 aaKnown RBP20.78■□□□□ 0.92
PRDM4-205ENST00000550376 A0A088AWK7 358 aa20.78■□□□□ 0.92
PRDM4-205ENST00000550376 TTC34A8MYJ7 566 aa20.78■□□□□ 0.92
PRDM4-205ENST00000550376 CDK14O94921 469 aa20.78■□□□□ 0.92
PRDM4-205ENST00000550376 PRDX3P30048 256 aaKnown RBP20.78■□□□□ 0.92
PRDM4-205ENST00000550376 PTGER3P43115 390 aa20.78■□□□□ 0.92
PRDM4-205ENST00000550376 SESN3P58005 492 aa20.78■□□□□ 0.92
PRDM4-205ENST00000550376 CMTM5Q96DZ9 223 aa20.78■□□□□ 0.92
PRDM4-205ENST00000550376 P2RY12Q9H244 342 aa20.78■□□□□ 0.92
PRDM4-205ENST00000550376 PIDD1Q9HB75 910 aa20.78■□□□□ 0.92
PRDM4-205ENST00000550376 POPDC3Q9HBV1 291 aa20.78■□□□□ 0.92
PRDM4-205ENST00000550376 EML4Q9HC35 981 aaKnown RBP20.78■□□□□ 0.92
PRDM4-205ENST00000550376 COPG1Q9Y678 874 aaKnown RBP20.78■□□□□ 0.92
PRDM4-205ENST00000550376 MTCL1Q9Y4B5 1905 aaKnown RBP20.78■□□□□ 0.92
PRDM4-205ENST00000550376 CAPN8A6NHC0 703 aa20.77■□□□□ 0.92
PRDM4-205ENST00000550376 PYGLP06737 847 aa20.77■□□□□ 0.92
PRDM4-205ENST00000550376 CCND1P24385 295 aa20.77■□□□□ 0.92
PRDM4-205ENST00000550376 CLCN7P51798 805 aa20.77■□□□□ 0.92
PRDM4-205ENST00000550376 IL2P60568 153 aa20.77■□□□□ 0.92
PRDM4-205ENST00000550376 PTRHD1Q6GMV3 140 aaKnown RBP20.77■□□□□ 0.92
PRDM4-205ENST00000550376 DEFB107AQ8IZN7 70 aa20.77■□□□□ 0.92
PRDM4-205ENST00000550376 FBXO39Q8N4B4 442 aa20.77■□□□□ 0.92
PRDM4-205ENST00000550376 CCDC124Q96CT7 223 aaKnown RBP20.77■□□□□ 0.92
PRDM4-205ENST00000550376 L3HYPDHQ96EM0 354 aa20.77■□□□□ 0.92
PRDM4-205ENST00000550376 ASIC4Q96FT7 647 aa20.77■□□□□ 0.92
PRDM4-205ENST00000550376 KLHL32Q96NJ5 620 aa20.77■□□□□ 0.92
PRDM4-205ENST00000550376 MCOLN1Q9GZU1 580 aa20.77■□□□□ 0.92
PRDM4-205ENST00000550376 SLC25A13Q9UJS0 675 aa20.77■□□□□ 0.92
PRDM4-205ENST00000550376 PRUNE2Q8WUY3 3088 aa20.77■□□□□ 0.91
PRDM4-205ENST00000550376 GLYATL1P3A0A0U1RQE8 302 aa20.77■□□□□ 0.91
PRDM4-205ENST00000550376 PRMT5O14744 637 aaPredicted RBP20.77■□□□□ 0.91
PRDM4-205ENST00000550376 ANP32DO95626 131 aa20.77■□□□□ 0.91
PRDM4-205ENST00000550376 ITGAXP20702 1163 aa20.77■□□□□ 0.91
PRDM4-205ENST00000550376 PBX2P40425 430 aa20.77■□□□□ 0.91
PRDM4-205ENST00000550376 PTSQ03393 145 aa20.77■□□□□ 0.91
PRDM4-205ENST00000550376 CARD16Q5EG05 197 aa20.77■□□□□ 0.91
PRDM4-205ENST00000550376 METTL21CQ5VZV1 264 aa20.77■□□□□ 0.91
PRDM4-205ENST00000550376 SUGP1Q8IWZ8 645 aaKnown RBP20.77■□□□□ 0.91
PRDM4-205ENST00000550376 PLCD3Q8N3E9 789 aa20.77■□□□□ 0.91
PRDM4-205ENST00000550376 MBD1Q9UIS9 605 aaPredicted RBP20.77■□□□□ 0.91
PRDM4-205ENST00000550376 SLCO1B7G3V0H7 640 aa20.76■□□□□ 0.91
PRDM4-205ENST00000550376 KERAO60938 352 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms