RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 TBATAQ96M53 351 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 PAFAH2Q99487 392 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 FAM83DQ9H4H8 585 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 SLC32A1Q9H598 525 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 PLAC1Q9HBJ0 212 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 SGK2Q9HBY8 427 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 CD248Q9HCU0 757 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 INTS10Q9NVR2 710 aaKnown RBP9.47□□□□□ -0.89
YBX3-215ENST00000544504 SENP1Q9P0U3 644 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 BCCIPQ9P287 314 aaKnown RBP eCLIP9.47□□□□□ -0.89
YBX3-215ENST00000544504 SLC2A6Q9UGQ3 507 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 LGALS13Q9UHV8 139 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 KLK13Q9UKR3 277 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 FBXO5Q9UKT4 447 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 FADS3Q9Y5Q0 445 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 A0A1W2PP55 124 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 FAM221BA6H8Z2 402 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 LRRC72A6NJI9 287 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 EIF4E1BA6NMX2 242 aaKnown RBP9.46□□□□□ -0.9
YBX3-215ENST00000544504 GOLGA8KD6RF30 607 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 AURKAO14965 403 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 PLRG1O43660 514 aaKnown RBP9.46□□□□□ -0.9
YBX3-215ENST00000544504 BUD23O43709 281 aaKnown RBP9.46□□□□□ -0.9
YBX3-215ENST00000544504 NDUFS3O75489 264 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 SRP72O76094 671 aaKnown RBP9.46□□□□□ -0.9
YBX3-215ENST00000544504 PCDH8O95206 1070 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 PRAMEF1O95521 474 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 APBB3O95704 486 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 GOT2P00505 430 aaKnown RBP9.46□□□□□ -0.9
YBX3-215ENST00000544504 SHBGP04278 402 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 CAPNS1P04632 268 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 SNRPAP09012 282 aaKnown RBP9.46□□□□□ -0.9
YBX3-215ENST00000544504 BPIP17213 487 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 GABRG2P18507 467 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 NDUFV2P19404 249 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 LHCGRP22888 699 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 MC4RP32245 332 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 NUDT1P36639 197 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 LIG3P49916 1009 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 RPS21P63220 83 aaKnown RBP9.46□□□□□ -0.9
YBX3-215ENST00000544504 TMPRSS15P98073 1019 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 PTSQ03393 145 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 RALGDSQ12967 914 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 AGERQ15109 404 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 MAP7D1Q3KQU3 841 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 ZRANB3Q5FWF4 1079 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 AGBL2Q5U5Z8 902 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 AGBL4Q5VU57 503 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 C19orf48Q6RUI8 117 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 TMEM92Q6UXU6 159 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 PACS1Q6VY07 963 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 SNX20Q7Z614 316 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 PTAR1Q7Z6K3 402 aaPredicted RBP9.46□□□□□ -0.9
YBX3-215ENST00000544504 TSPAN33Q86UF1 283 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 C11orf74Q86VG3 221 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 PGBD3Q8N328 593 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 AADATQ8N5Z0 425 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 ZNF398Q8TD17 642 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 ASB12Q8WXK4 309 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 DHRS4Q9BTZ2 278 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 ZSCAN5AQ9BUG6 496 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 BPIFA1Q9NP55 256 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 IARS2Q9NSE4 1012 aaKnown RBP9.46□□□□□ -0.9
YBX3-215ENST00000544504 FKBPLQ9UIM3 349 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 KCTD3Q9Y597 815 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 COMMD10Q9Y6G5 202 aa9.46□□□□□ -0.9
YBX3-215ENST00000544504 ANTXRLA6NF34 631 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 SMIM23A6NLE4 172 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 A8MX80 341 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 HMGB1P1B2RPK0 211 aaPredicted RBP9.45□□□□□ -0.9
YBX3-215ENST00000544504 CFAP99D6REC4 459 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 SASH3O75995 380 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 TM7SF2O76062 418 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 IGLV3-19P01714 112 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 C1QAP02745 245 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 C1SP09871 688 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 ARNTP27540 789 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 FOXN2P32314 431 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 LEPRP48357 1165 aaKnown RBP9.45□□□□□ -0.9
YBX3-215ENST00000544504 CD151P48509 253 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 ARSDP51689 593 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 XIAPP98170 497 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 DPTQ07507 201 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 SGCGQ13326 291 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 NFATC2Q13469 925 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 ITIH4Q14624 930 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 TYSND1Q2T9J0 566 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 UAP1L1Q3KQV9 507 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 SETMARQ53H47 684 aaPredicted RBP9.45□□□□□ -0.9
YBX3-215ENST00000544504 Q6ZVL8 140 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 TAS2R42Q7RTR8 314 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 HSD11B1LQ7Z5J1 315 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 CCDC91Q7Z6B0 441 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 TECPR1Q7Z6L1 1165 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 STRA8Q7Z7C7 330 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 CILP2Q8IUL8 1156 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 TRAM1L1Q8N609 369 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 C2CD4AQ8NCU7 369 aaPredicted RBP9.45□□□□□ -0.9
YBX3-215ENST00000544504 OR2T34Q8NGX1 318 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 OR2W6PQ8NHA6 318 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms