RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 FBXO48Q5FWF7 155 aa19.26■□□□□ 0.67
SUDS3-204ENST00000543473 ADGRG6Q86SQ4 1221 aa19.26■□□□□ 0.67
SUDS3-204ENST00000543473 SMYD1Q8NB12 490 aa19.26■□□□□ 0.67
SUDS3-204ENST00000543473 IGSF9Q9P2J2 1179 aa19.26■□□□□ 0.67
SUDS3-204ENST00000543473 SUCOQ9UBS9 1254 aaKnown RBP19.26■□□□□ 0.67
SUDS3-204ENST00000543473 A8MX80 341 aa19.26■□□□□ 0.67
SUDS3-204ENST00000543473 BCAS2O75934 225 aaPredicted RBP19.26■□□□□ 0.67
SUDS3-204ENST00000543473 LPOP22079 712 aaPredicted RBP19.26■□□□□ 0.67
SUDS3-204ENST00000543473 WARSP23381 471 aaKnown RBP19.26■□□□□ 0.67
SUDS3-204ENST00000543473 CTSKP43235 329 aa19.26■□□□□ 0.67
SUDS3-204ENST00000543473 OGDHQ02218 1023 aa19.26■□□□□ 0.67
SUDS3-204ENST00000543473 IL18R1Q13478 541 aa19.26■□□□□ 0.67
SUDS3-204ENST00000543473 DCLRE1AQ6PJP8 1040 aa19.26■□□□□ 0.67
SUDS3-204ENST00000543473 EPGNQ6UW88 154 aa19.26■□□□□ 0.67
SUDS3-204ENST00000543473 NUDT18Q6ZVK8 323 aa19.26■□□□□ 0.67
SUDS3-204ENST00000543473 AP3S1Q92572 193 aa19.26■□□□□ 0.67
SUDS3-204ENST00000543473 TSSK3Q96PN8 268 aa19.26■□□□□ 0.67
SUDS3-204ENST00000543473 A0A1W2PPW3 197 aa19.26■□□□□ 0.67
SUDS3-204ENST00000543473 PRKAR1AP10644 381 aa19.26■□□□□ 0.67
SUDS3-204ENST00000543473 BCL2L1Q07817 233 aa19.26■□□□□ 0.67
SUDS3-204ENST00000543473 USP39Q53GS9 565 aaKnown RBP19.26■□□□□ 0.67
SUDS3-204ENST00000543473 MBLAC2Q68D91 279 aa19.26■□□□□ 0.67
SUDS3-204ENST00000543473 PIK3C3Q8NEB9 887 aa19.26■□□□□ 0.67
SUDS3-204ENST00000543473 MRPS31Q92665 395 aaKnown RBP19.26■□□□□ 0.67
SUDS3-204ENST00000543473 CAPN10Q9HC96 672 aa19.26■□□□□ 0.67
SUDS3-204ENST00000543473 PRKCHP24723 683 aa19.26■□□□□ 0.67
SUDS3-204ENST00000543473 IFNGR2P38484 337 aa19.26■□□□□ 0.67
SUDS3-204ENST00000543473 KLF1Q13351 362 aaPredicted RBP19.26■□□□□ 0.67
SUDS3-204ENST00000543473 FAM35AQ86V20 835 aa19.26■□□□□ 0.67
SUDS3-204ENST00000543473 EMID1Q96A84 441 aaPredicted RBP19.26■□□□□ 0.67
SUDS3-204ENST00000543473 CHCHD6Q9BRQ6 235 aa19.26■□□□□ 0.67
SUDS3-204ENST00000543473 ZNF99A8MXY4 864 aaPredicted RBP19.25■□□□□ 0.67
SUDS3-204ENST00000543473 TOP3BO95985 862 aaKnown RBP19.25■□□□□ 0.67
SUDS3-204ENST00000543473 GNPDA1P46926 289 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 MRPS6P82932 125 aaKnown RBP19.25■□□□□ 0.67
SUDS3-204ENST00000543473 STX4Q12846 297 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 INTS6LQ5JSJ4 861 aaKnown RBP19.25■□□□□ 0.67
SUDS3-204ENST00000543473 CDCA2Q69YH5 1023 aaPredicted RBP19.25■□□□□ 0.67
SUDS3-204ENST00000543473 ERAP2Q6P179 960 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 PTCHD4Q6ZW05 846 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 REPS1Q96D71 796 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 GINS4Q9BRT9 223 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 YTHDF1Q9BYJ9 559 aaKnown RBP19.25■□□□□ 0.67
SUDS3-204ENST00000543473 ZNF222Q9UK12 451 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 PSME2Q9UL46 239 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 GMEB1Q9Y692 573 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 PLK4O00444 970 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 PLOD3O60568 738 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 MTHFD1P11586 935 aaKnown RBP19.25■□□□□ 0.67
SUDS3-204ENST00000543473 ATXN1P54253 815 aaKnown RBP19.25■□□□□ 0.67
SUDS3-204ENST00000543473 ATP12AP54707 1039 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 ARPC4P59998 168 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 TOP1MTQ969P6 601 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 FBXL18Q96ME1 805 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 CDK5RAP1Q96SZ6 601 aaKnown RBP19.25■□□□□ 0.67
SUDS3-204ENST00000543473 TMEM39AQ9NV64 488 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 MAPRE3Q9UPY8 281 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 PTCH2Q9Y6C5 1203 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 PHRF1Q9P1Y6 1649 aaKnown RBP19.25■□□□□ 0.67
SUDS3-204ENST00000543473 SNED1Q8TER0 1413 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 NPEPPSL1A6NEC2 478 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 MT-CYBP00156 380 aaPredicted RBP19.25■□□□□ 0.67
SUDS3-204ENST00000543473 GPD2P43304 727 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 PTSQ03393 145 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 IGDCC3Q8IVU1 814 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 CDK20Q8IZL9 346 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 PTBP2Q9UKA9 531 aaKnown RBP19.25■□□□□ 0.67
SUDS3-204ENST00000543473 RGPD5Q99666 1765 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 FAM240BA0A1B0GVZ2 78 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 MSCO60682 206 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 NR2F6P10588 404 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 SPRYD7Q5W111 196 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 SLC34A3Q8N130 599 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 SVOPLQ8N434 492 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 MINDY2Q8NBR6 621 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 MRPL48Q96GC5 212 aaKnown RBP19.25■□□□□ 0.67
SUDS3-204ENST00000543473 NARS2Q96I59 477 aaKnown RBP19.25■□□□□ 0.67
SUDS3-204ENST00000543473 SLC39A3Q9BRY0 314 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 TBCCD1Q9NVR7 557 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 ADAMTS6Q9UKP5 1117 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 CORO2BQ9UQ03 480 aa19.25■□□□□ 0.67
SUDS3-204ENST00000543473 PENKP01210 267 aaPredicted RBP19.24■□□□□ 0.67
SUDS3-204ENST00000543473 C9orf57Q5W0N0 161 aa19.24■□□□□ 0.67
SUDS3-204ENST00000543473 C17orf50Q8WW18 174 aa19.24■□□□□ 0.67
SUDS3-204ENST00000543473 BORCS6Q96GS4 357 aa19.24■□□□□ 0.67
SUDS3-204ENST00000543473 C12orf42Q96LP6 360 aa19.24■□□□□ 0.67
SUDS3-204ENST00000543473 ZFP42Q96MM3 310 aa19.24■□□□□ 0.67
SUDS3-204ENST00000543473 CCDC106Q9BWC9 280 aa19.24■□□□□ 0.67
SUDS3-204ENST00000543473 INTS10Q9NVR2 710 aaKnown RBP19.24■□□□□ 0.67
SUDS3-204ENST00000543473 SMPD4Q9NXE4 827 aa19.24■□□□□ 0.67
SUDS3-204ENST00000543473 TLL2Q9Y6L7 1015 aa19.24■□□□□ 0.67
SUDS3-204ENST00000543473 PMF1-BGLAPU3KQ54 211 aa19.24■□□□□ 0.67
SUDS3-204ENST00000543473 NOS3P29474 1203 aa19.24■□□□□ 0.67
SUDS3-204ENST00000543473 DPYSL2Q16555 572 aa19.24■□□□□ 0.67
SUDS3-204ENST00000543473 MOGQ16653 247 aa19.24■□□□□ 0.67
SUDS3-204ENST00000543473 BRMS1LQ5PSV4 323 aa19.24■□□□□ 0.67
SUDS3-204ENST00000543473 IKBIPQ70UQ0 350 aa19.24■□□□□ 0.67
SUDS3-204ENST00000543473 ZNF671Q8TAW3 534 aa19.24■□□□□ 0.67
SUDS3-204ENST00000543473 EXOC2Q96KP1 924 aa19.24■□□□□ 0.67
SUDS3-204ENST00000543473 TBATAQ96M53 351 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms