RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 GOLGA8DPQ0D2H9 430 aa5.8□□□□□ -1.48
YBX3-210ENST00000540975 MED22Q15528 200 aa5.8□□□□□ -1.48
YBX3-210ENST00000540975 PNLIPRP3Q17RR3 467 aa5.8□□□□□ -1.48
YBX3-210ENST00000540975 FAM171BQ6P995 826 aa5.8□□□□□ -1.48
YBX3-210ENST00000540975 C19orf48Q6RUI8 117 aa5.8□□□□□ -1.48
YBX3-210ENST00000540975 ZNF852Q6ZMS4 543 aa5.8□□□□□ -1.48
YBX3-210ENST00000540975 CTAGE4Q8IX94 777 aa5.8□□□□□ -1.48
YBX3-210ENST00000540975 DNAAF4Q8WXU2 420 aa5.8□□□□□ -1.48
YBX3-210ENST00000540975 NEURL2Q9BR09 285 aa5.8□□□□□ -1.48
YBX3-210ENST00000540975 MAGIXQ9H6Y5 334 aa5.8□□□□□ -1.48
YBX3-210ENST00000540975 EHD2Q9NZN4 543 aa5.8□□□□□ -1.48
YBX3-210ENST00000540975 UBA2Q9UBT2 640 aaPredicted RBP5.8□□□□□ -1.48
YBX3-210ENST00000540975 CLIC4Q9Y696 253 aa5.8□□□□□ -1.48
YBX3-210ENST00000540975 ZCWPW2A0A1B0GU75 182 aa5.79□□□□□ -1.48
YBX3-210ENST00000540975 PRR23AA6NEV1 266 aa5.79□□□□□ -1.48
YBX3-210ENST00000540975 ATP2A1O14983 1001 aa5.79□□□□□ -1.48
YBX3-210ENST00000540975 HCRTR2O43614 444 aa5.79□□□□□ -1.48
YBX3-210ENST00000540975 NDUFS3O75489 264 aa5.79□□□□□ -1.48
YBX3-210ENST00000540975 CCNDBP1O95273 360 aa5.79□□□□□ -1.48
YBX3-210ENST00000540975 CD4P01730 458 aa5.79□□□□□ -1.48
YBX3-210ENST00000540975 TCEA1P23193 301 aaKnown RBP5.79□□□□□ -1.48
YBX3-210ENST00000540975 NFKBIAP25963 317 aa5.79□□□□□ -1.48
YBX3-210ENST00000540975 AMPHP49418 695 aa5.79□□□□□ -1.48
YBX3-210ENST00000540975 MMP14P50281 582 aa5.79□□□□□ -1.48
YBX3-210ENST00000540975 NAB2Q15742 525 aa5.79□□□□□ -1.48
YBX3-210ENST00000540975 KRTCAP3Q53RY4 240 aa5.79□□□□□ -1.48
YBX3-210ENST00000540975 ZNF805Q5CZA5 627 aa5.79□□□□□ -1.48
YBX3-210ENST00000540975 PDSS1Q5T2R2 415 aa5.79□□□□□ -1.48
YBX3-210ENST00000540975 LRIF1Q5T3J3 769 aa5.79□□□□□ -1.48
YBX3-210ENST00000540975 OR7E24Q6IFN5 339 aa5.79□□□□□ -1.48
YBX3-210ENST00000540975 PAPD4Q6PIY7 484 aaKnown RBP5.79□□□□□ -1.48
YBX3-210ENST00000540975 RAD9BQ6WBX8 426 aa5.79□□□□□ -1.48
YBX3-210ENST00000540975 SEPT14Q6ZU15 432 aa5.79□□□□□ -1.48
YBX3-210ENST00000540975 RNF168Q8IYW5 571 aaPredicted RBP5.79□□□□□ -1.48
YBX3-210ENST00000540975 SLC38A5Q8WUX1 472 aa5.79□□□□□ -1.48
YBX3-210ENST00000540975 SLC44A1Q8WWI5 657 aa5.79□□□□□ -1.48
YBX3-210ENST00000540975 ARHGEF2Q92974 986 aaKnown RBP5.79□□□□□ -1.48
YBX3-210ENST00000540975 SIL1Q9H173 461 aa5.79□□□□□ -1.48
YBX3-210ENST00000540975 ZNF334Q9HCZ1 680 aaPredicted RBP5.79□□□□□ -1.48
YBX3-210ENST00000540975 TCP11L1Q9NUJ3 509 aa5.79□□□□□ -1.48
YBX3-210ENST00000540975 MTMR10Q9NXD2 777 aa5.79□□□□□ -1.48
YBX3-210ENST00000540975 CWC15Q9P013 229 aaKnown RBP5.79□□□□□ -1.48
YBX3-210ENST00000540975 TDRD9Q8NDG6 1382 aaKnown RBP5.79□□□□□ -1.48
YBX3-210ENST00000540975 SOCS5O75159 536 aa5.78□□□□□ -1.48
YBX3-210ENST00000540975 KCNK5O95279 499 aa5.78□□□□□ -1.48
YBX3-210ENST00000540975 ARCN1P48444 511 aaKnown RBP5.78□□□□□ -1.48
YBX3-210ENST00000540975 MRPS34P82930 218 aaKnown RBP5.78□□□□□ -1.48
YBX3-210ENST00000540975 COG7P83436 770 aa5.78□□□□□ -1.48
YBX3-210ENST00000540975 RUNX1T1Q06455 604 aa5.78□□□□□ -1.48
YBX3-210ENST00000540975 DMP1Q13316 513 aaPredicted RBP5.78□□□□□ -1.48
YBX3-210ENST00000540975 NSUN5P2Q63ZY6 315 aa5.78□□□□□ -1.48
YBX3-210ENST00000540975 ZNF704Q6ZNC4 412 aaPredicted RBP5.78□□□□□ -1.48
YBX3-210ENST00000540975 SLC26A9Q7LBE3 791 aa5.78□□□□□ -1.48
YBX3-210ENST00000540975 ATG9AQ7Z3C6 839 aa5.78□□□□□ -1.48
YBX3-210ENST00000540975 SDCCAG8Q86SQ7 713 aaPredicted RBP5.78□□□□□ -1.48
YBX3-210ENST00000540975 SLC24A4Q8NFF2 622 aa5.78□□□□□ -1.48
YBX3-210ENST00000540975 OR1J2Q8NGS2 313 aa5.78□□□□□ -1.48
YBX3-210ENST00000540975 HM13Q8TCT9 377 aa5.78□□□□□ -1.48
YBX3-210ENST00000540975 UCMAQ8WVF2 138 aa5.78□□□□□ -1.48
YBX3-210ENST00000540975 EGLN2Q96KS0 407 aa5.78□□□□□ -1.48
YBX3-210ENST00000540975 LRMDAQ9H2I8 198 aa5.78□□□□□ -1.48
YBX3-210ENST00000540975 PIGMQ9H3S5 423 aa5.78□□□□□ -1.48
YBX3-210ENST00000540975 TAAR2Q9P1P5 351 aa5.78□□□□□ -1.48
YBX3-210ENST00000540975 ORC3Q9UBD5 711 aaPredicted RBP5.78□□□□□ -1.48
YBX3-210ENST00000540975 AASSQ9UDR5 926 aa5.78□□□□□ -1.48
YBX3-210ENST00000540975 STK39Q9UEW8 545 aa5.78□□□□□ -1.48
YBX3-210ENST00000540975 R3HDM2Q9Y2K5 976 aaKnown RBP5.78□□□□□ -1.48
YBX3-210ENST00000540975 A0A1W2PP11 408 aa5.77□□□□□ -1.49
YBX3-210ENST00000540975 EPB41L2O43491 1005 aaKnown RBP5.77□□□□□ -1.49
YBX3-210ENST00000540975 DAB1O75553 588 aa5.77□□□□□ -1.49
YBX3-210ENST00000540975 DDX58O95786 925 aaKnown RBP5.77□□□□□ -1.49
YBX3-210ENST00000540975 ICAM1P05362 532 aa5.77□□□□□ -1.49
YBX3-210ENST00000540975 TAS2R40P59535 323 aa5.77□□□□□ -1.49
YBX3-210ENST00000540975 PDE1CQ14123 709 aaPredicted RBP5.77□□□□□ -1.49
YBX3-210ENST00000540975 HAUS3Q68CZ6 603 aa5.77□□□□□ -1.49
YBX3-210ENST00000540975 NCEH1Q6PIU2 408 aa5.77□□□□□ -1.49
YBX3-210ENST00000540975 GLDNQ6ZMI3 551 aaPredicted RBP5.77□□□□□ -1.49
YBX3-210ENST00000540975 PXKQ7Z7A4 578 aa5.77□□□□□ -1.49
YBX3-210ENST00000540975 OR8K5Q8NH50 307 aa5.77□□□□□ -1.49
YBX3-210ENST00000540975 UTP15Q8TED0 518 aaKnown RBP5.77□□□□□ -1.49
YBX3-210ENST00000540975 ZKSCAN4Q969J2 545 aaPredicted RBP5.77□□□□□ -1.49
YBX3-210ENST00000540975 ZNF583Q96ND8 569 aa5.77□□□□□ -1.49
YBX3-210ENST00000540975 RRP7BPQ9NSQ0 103 aa5.77□□□□□ -1.49
YBX3-210ENST00000540975 DIAPH3Q9NSV4 1193 aa5.77□□□□□ -1.49
YBX3-210ENST00000540975 OLA1Q9NTK5 396 aaKnown RBP5.77□□□□□ -1.49
YBX3-210ENST00000540975 LIPT2A6NK58 231 aa5.76□□□□□ -1.49
YBX3-210ENST00000540975 EIF4E1BA6NMX2 242 aaKnown RBP5.76□□□□□ -1.49
YBX3-210ENST00000540975 ERVV-2B6SEH9 535 aa5.76□□□□□ -1.49
YBX3-210ENST00000540975 DVL1O14640 695 aa5.76□□□□□ -1.49
YBX3-210ENST00000540975 SLC22A3O75751 556 aa5.76□□□□□ -1.49
YBX3-210ENST00000540975 RNASEH2AO75792 299 aaKnown RBP5.76□□□□□ -1.49
YBX3-210ENST00000540975 MBD4O95243 580 aa5.76□□□□□ -1.49
YBX3-210ENST00000540975 HOXA1P49639 335 aaPredicted RBP5.76□□□□□ -1.49
YBX3-210ENST00000540975 DVL1P1P54792 670 aaPredicted RBP5.76□□□□□ -1.49
YBX3-210ENST00000540975 KRTAP10-6P60371 365 aaPredicted RBP5.76□□□□□ -1.49
YBX3-210ENST00000540975 RPL24P83731 157 aaKnown RBP5.76□□□□□ -1.49
YBX3-210ENST00000540975 PLIN5Q00G26 463 aa5.76□□□□□ -1.49
YBX3-210ENST00000540975 GAGE5Q13069 117 aa5.76□□□□□ -1.49
YBX3-210ENST00000540975 GAGE6Q13070 117 aa5.76□□□□□ -1.49
YBX3-210ENST00000540975 PDILTQ8N807 584 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms