RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 TRIM16LQ309B1 348 aa8.19□□□□□ -1.1
ABCA4-207ENST00000536513 PLA2G4EQ3MJ16 856 aa8.19□□□□□ -1.1
ABCA4-207ENST00000536513 MPPE1Q53F39 396 aa8.19□□□□□ -1.1
ABCA4-207ENST00000536513 SPDYCQ5MJ68 293 aa8.19□□□□□ -1.1
ABCA4-207ENST00000536513 MBLAC2Q68D91 279 aa8.19□□□□□ -1.1
ABCA4-207ENST00000536513 MSANTD2Q6P1R3 559 aa8.19□□□□□ -1.1
ABCA4-207ENST00000536513 LAYNQ6UX15 382 aa8.19□□□□□ -1.1
ABCA4-207ENST00000536513 DDIASQ8IXT1 998 aa8.19□□□□□ -1.1
ABCA4-207ENST00000536513 C2orf15Q8WU43 125 aaKnown RBP8.19□□□□□ -1.1
ABCA4-207ENST00000536513 APOPT1Q96IL0 206 aa8.19□□□□□ -1.1
ABCA4-207ENST00000536513 KLF16Q9BXK1 252 aaPredicted RBP8.19□□□□□ -1.1
ABCA4-207ENST00000536513 OXCT2Q9BYC2 517 aaPredicted RBP8.19□□□□□ -1.1
ABCA4-207ENST00000536513 NMUR2Q9GZQ4 415 aa8.19□□□□□ -1.1
ABCA4-207ENST00000536513 IL21Q9HBE4 155 aa8.19□□□□□ -1.1
ABCA4-207ENST00000536513 PNPOQ9NVS9 261 aa8.19□□□□□ -1.1
ABCA4-207ENST00000536513 DEC1Q9P2X7 70 aa8.19□□□□□ -1.1
ABCA4-207ENST00000536513 THSD7BQ9C0I4 1608 aa8.19□□□□□ -1.1
ABCA4-207ENST00000536513 CAPN8A6NHC0 703 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 MAP3K13O43283 966 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 FKBP6O75344 327 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 ALDOAP04075 364 aaKnown RBP8.18□□□□□ -1.1
ABCA4-207ENST00000536513 PABPC1P11940 636 aaKnown RBP8.18□□□□□ -1.1
ABCA4-207ENST00000536513 RPL34P49207 117 aaKnown RBP8.18□□□□□ -1.1
ABCA4-207ENST00000536513 DGKGP49619 791 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 YBEYP58557 167 aaPredicted RBP8.18□□□□□ -1.1
ABCA4-207ENST00000536513 CDK16Q00536 496 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 DDX39BQ13838 428 aaKnown RBP8.18□□□□□ -1.1
ABCA4-207ENST00000536513 SPANXN3Q5MJ09 141 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 TMEM164Q5U3C3 297 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 MRNIPQ6NTE8 343 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 BTN2A1Q7KYR7 527 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 ARCQ7LC44 396 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 CLVS1Q8IUQ0 354 aaPredicted RBP8.18□□□□□ -1.1
ABCA4-207ENST00000536513 UMODL1-AS1Q8N2C9 162 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 LMNTD1Q8N9Z9 388 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 PLD4Q96BZ4 506 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 FCRL5Q96RD9 977 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 HERC2P3Q9BVR0 1158 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 CATSPERZQ9NTU4 200 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 TAGLN3Q9UI15 199 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 ANGPTL3Q9Y5C1 460 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 CUL9Q8IWT3 2517 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 TRBV23OR9-2A0A075B6M9 112 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 BTN3A1O00481 513 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 E2F6O75461 281 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 SPAG6O75602 509 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 CRTAMO95727 393 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 IGSF6O95976 241 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 OAS1P00973 400 aaKnown RBP8.18□□□□□ -1.1
ABCA4-207ENST00000536513 RALBP11234 206 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 GM2AP17900 193 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 VCLP18206 1134 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 FSHRP23945 695 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 MAP4P27816 1152 aaKnown RBP8.18□□□□□ -1.1
ABCA4-207ENST00000536513 HOXD9P28356 352 aaPredicted RBP8.18□□□□□ -1.1
ABCA4-207ENST00000536513 MSX2P35548 267 aaPredicted RBP8.18□□□□□ -1.1
ABCA4-207ENST00000536513 HCAR3P49019 387 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 CDC16Q13042 620 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 IHHQ14623 411 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 FXNQ16595 210 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 ATAT1Q5SQI0 421 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 PDPK2PQ6A1A2 396 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 FBXL19Q6PCT2 694 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 RIN3Q8TB24 985 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 IRF7Q92985 503 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 CCDC138Q96M89 665 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 WDR55Q9H6Y2 383 aaPredicted RBP8.18□□□□□ -1.1
ABCA4-207ENST00000536513 NMRAL1Q9HBL8 299 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 CD274Q9NZQ7 290 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 LRRC14BA6NHZ5 514 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 TMEM233B4DJY2 109 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.18□□□□□ -1.1
ABCA4-207ENST00000536513 BOLA2-SMG1P6H3BVE0 249 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 MAGEB3O15480 346 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 SIX3O95343 332 aaPredicted RBP8.18□□□□□ -1.1
ABCA4-207ENST00000536513 PRAMEF1O95521 474 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 ASGR2P07307 311 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 CHRNGP07510 517 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 TFEBP19484 476 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 SERPINA4P29622 427 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 DLX2Q07687 328 aaPredicted RBP8.18□□□□□ -1.1
ABCA4-207ENST00000536513 CBLBQ13191 982 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 GALNTL6Q49A17 601 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 PITRM1Q5JRX3 1037 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 TEDDM1Q5T9Z0 273 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 CEP97Q8IW35 865 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 RBM12BQ8IXT5 1001 aaKnown RBP8.18□□□□□ -1.1
ABCA4-207ENST00000536513 ULK2Q8IYT8 1036 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 MYO1HQ8N1T3 1032 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 BEND7Q8N7W2 519 aaPredicted RBP8.18□□□□□ -1.1
ABCA4-207ENST00000536513 RBM15BQ8NDT2 890 aaKnown RBP8.18□□□□□ -1.1
ABCA4-207ENST00000536513 OR4L1Q8NH43 312 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 MTFMTQ96DP5 389 aaKnown RBP8.18□□□□□ -1.1
ABCA4-207ENST00000536513 MYO19Q96H55 970 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 OSGEPL1Q9H4B0 414 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 ZFYVE1Q9HBF4 777 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 SEMA4BQ9NPR2 832 aaPredicted RBP8.18□□□□□ -1.1
ABCA4-207ENST00000536513 ZNF229Q9UJW7 825 aa8.18□□□□□ -1.1
ABCA4-207ENST00000536513 C15orf38-AP3S2A0A0A6YYH1 394 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 EPOPA6NHQ4 379 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms