RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 TMEM145Q8NBT3 493 aa11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 PLA2G15Q8NCC3 412 aa11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 MCUQ8NE86 351 aa11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 NUS1Q96E22 293 aa11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 DTD2Q96FN9 168 aa11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 PWWP2AQ96N64 755 aa11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 SERPINB12Q96P63 405 aa11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 C1QTNF2Q9BXJ5 285 aa11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 SLC17A9Q9BYT1 436 aa11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 TCEAL2Q9H3H9 227 aaPredicted RBP11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 BPIFA1Q9NP55 256 aa11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 SYBUQ9NX95 663 aa11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 GRHL1Q9NZI5 618 aa11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 HACD3Q9P035 362 aa11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 DMGDHQ9UI17 866 aaKnown RBP11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 PCDHGB2Q9Y5G2 931 aa11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 K7ESM1 405 aa11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 PSMD11O00231 422 aa11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 CCL22O00626 93 aa11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 CASC3O15234 703 aaKnown RBP11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 TP73O15350 636 aa11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 PCCBP05166 539 aa11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 RHOXF2BP0C7M4 288 aa11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 CSRP3P50461 194 aa11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 AFF3P51826 1226 aaKnown RBP11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 ZNF140P52738 457 aaPredicted RBP11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 NXPH1P58417 271 aa11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 GUCY2DQ02846 1103 aa11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 BNIP3Q12983 259 aa11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 SGCGQ13326 291 aa11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 MORF4L2Q15014 288 aa11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 TAF1AQ15573 450 aaPredicted RBP11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 WSCD2Q2TBF2 565 aa11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 LRRC8BQ6P9F7 803 aa11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 TMC3Q7Z5M5 1100 aa11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 PCGF5Q86SE9 256 aa11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 HOOK3Q86VS8 718 aa11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 MPP5Q8N3R9 675 aa11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 TP53I13Q8NBR0 393 aaPredicted RBP11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 OR13C4Q8NGS5 318 aa11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 PTCD2Q8WV60 388 aaKnown RBP11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 WBP1Q96G27 269 aa11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 DNAJC1Q96KC8 554 aaKnown RBP11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 RHOXF2Q9BQY4 288 aa11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 TRIM4Q9C037 500 aa11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 TRABDQ9H4I3 376 aa11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 XAB2Q9HCS7 855 aaKnown RBP11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 RRAGDQ9NQL2 400 aaPredicted RBP11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 UCKL1Q9NWZ5 548 aa11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 PKD2L2Q9NZM6 624 aa11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 WHRNQ9P202 907 aa11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 KLF15Q9UIH9 416 aa11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 ANAPC5Q9UJX4 755 aa11.49□□□□□ -0.57
CCDC90B-210ENST00000528149 VILLO15195 856 aa11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 LDB2O43679 373 aa11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 CELA2BP08218 269 aaPredicted RBP11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 BPIP17213 487 aa11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 LPOP22079 712 aaPredicted RBP11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 HNRNPA2B1P22626 353 aaKnown RBP11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 CD38P28907 300 aa11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 AKT2P31751 481 aa11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 MAGEA3P43357 314 aa11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 SPINT3P49223 89 aa11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 RACK1P63244 317 aaKnown RBP11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 SARNPP82979 210 aaKnown RBP11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 TMPRSS15P98073 1019 aa11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 RHDQ02161 417 aa11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 CALCOCO2Q13137 446 aa11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 LRRC14Q15048 493 aa11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 FNBP1LQ5T0N5 605 aa11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 IL27RAQ6UWB1 636 aa11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 PRICKLE2Q7Z3G6 844 aa11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 PTAR1Q7Z6K3 402 aaPredicted RBP11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 TECPR1Q7Z6L1 1165 aa11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 AGGF1Q8N302 714 aaeCLIP11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 GPR26Q8NDV2 337 aa11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 PPHLN1Q8NEY8 458 aaKnown RBP11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 OR4K2Q8NGD2 314 aa11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 BRSK1Q8TDC3 778 aa11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 SCAMP4Q969E2 229 aa11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 SRPK1Q96SB4 655 aaKnown RBP11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 TRIM56Q9BRZ2 755 aaKnown RBP11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 C1QTNF7Q9BXJ2 289 aa11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 ABCG8Q9H221 673 aa11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 BFARQ9NZS9 450 aa11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 IL17CQ9P0M4 197 aa11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 PKP3Q9Y446 797 aa11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 TCAF1Q9Y4C2 921 aa11.48□□□□□ -0.57
CCDC90B-210ENST00000528149 HEATR9A2RTY3 570 aa11.47□□□□□ -0.57
CCDC90B-210ENST00000528149 C2orf81A6NN90 581 aa11.47□□□□□ -0.57
CCDC90B-210ENST00000528149 BHMG1C9JSJ3 638 aaPredicted RBP11.47□□□□□ -0.57
CCDC90B-210ENST00000528149 TLR4O00206 839 aa11.47□□□□□ -0.57
CCDC90B-210ENST00000528149 STX7O15400 261 aaKnown RBP11.47□□□□□ -0.57
CCDC90B-210ENST00000528149 GPR39O43194 453 aa11.47□□□□□ -0.57
CCDC90B-210ENST00000528149 BRINP1O60477 761 aa11.47□□□□□ -0.57
CCDC90B-210ENST00000528149 SLU7O95391 586 aaKnown RBP11.47□□□□□ -0.57
CCDC90B-210ENST00000528149 CRTAMO95727 393 aa11.47□□□□□ -0.57
CCDC90B-210ENST00000528149 THEGLP0DJG4 465 aa11.47□□□□□ -0.57
CCDC90B-210ENST00000528149 MLNP12872 115 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms