RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 FAM96AQ9H5X1 160 aa12.15□□□□□ -0.46
TRA2B-212ENST00000480461 IL21RQ9HBE5 538 aa12.15□□□□□ -0.46
TRA2B-212ENST00000480461 EPB41L5Q9HCM4 733 aa12.15□□□□□ -0.46
TRA2B-212ENST00000480461 ARFGAP3Q9NP61 516 aa12.15□□□□□ -0.46
TRA2B-212ENST00000480461 TREX1Q9NSU2 369 aa12.15□□□□□ -0.46
TRA2B-212ENST00000480461 ZDHHC18Q9NUE0 388 aa12.15□□□□□ -0.46
TRA2B-212ENST00000480461 BFARQ9NZS9 450 aa12.15□□□□□ -0.46
TRA2B-212ENST00000480461 NFKBIL1Q9UBC1 381 aaPredicted RBP12.15□□□□□ -0.46
TRA2B-212ENST00000480461 SLC6A14Q9UN76 642 aa12.15□□□□□ -0.46
TRA2B-212ENST00000480461 FNDC3AQ9Y2H6 1198 aaKnown RBP12.15□□□□□ -0.46
TRA2B-212ENST00000480461 TCAF1Q9Y4C2 921 aa12.15□□□□□ -0.46
TRA2B-212ENST00000480461 PCYT1BQ9Y5K3 369 aaPredicted RBP12.15□□□□□ -0.46
TRA2B-212ENST00000480461 OAS3Q9Y6K5 1087 aaKnown RBP12.15□□□□□ -0.46
TRA2B-212ENST00000480461 CCDC162PA2VCL2 907 aa12.14□□□□□ -0.47
TRA2B-212ENST00000480461 A6NNZ2 444 aa12.14□□□□□ -0.47
TRA2B-212ENST00000480461 INPP4BO15327 924 aa12.14□□□□□ -0.47
TRA2B-212ENST00000480461 CFIP05156 583 aa12.14□□□□□ -0.47
TRA2B-212ENST00000480461 HOXC4P09017 264 aaPredicted RBP12.14□□□□□ -0.47
TRA2B-212ENST00000480461 GNSP15586 552 aa12.14□□□□□ -0.47
TRA2B-212ENST00000480461 ARNTP27540 789 aa12.14□□□□□ -0.47
TRA2B-212ENST00000480461 GPR1P46091 355 aa12.14□□□□□ -0.47
TRA2B-212ENST00000480461 SARNPP82979 210 aaKnown RBP12.14□□□□□ -0.47
TRA2B-212ENST00000480461 DHX9Q08211 1270 aaKnown RBP12.14□□□□□ -0.47
TRA2B-212ENST00000480461 EIF2B5Q13144 721 aaKnown RBP12.14□□□□□ -0.47
TRA2B-212ENST00000480461 SHBQ15464 509 aa12.14□□□□□ -0.47
TRA2B-212ENST00000480461 GLE1Q53GS7 698 aaKnown RBP12.14□□□□□ -0.47
TRA2B-212ENST00000480461 ZNF542PQ5EBM4 170 aa12.14□□□□□ -0.47
TRA2B-212ENST00000480461 FAM151BQ6UXP7 276 aa12.14□□□□□ -0.47
TRA2B-212ENST00000480461 ADAMTSL4Q6UY14 1074 aa12.14□□□□□ -0.47
TRA2B-212ENST00000480461 IQCHQ86VS3 1027 aa12.14□□□□□ -0.47
TRA2B-212ENST00000480461 HEATR4Q86WZ0 1026 aa12.14□□□□□ -0.47
TRA2B-212ENST00000480461 PIANPQ8IYJ0 282 aa12.14□□□□□ -0.47
TRA2B-212ENST00000480461 CEP76Q8TAP6 659 aa12.14□□□□□ -0.47
TRA2B-212ENST00000480461 FBXO25Q8TCJ0 367 aa12.14□□□□□ -0.47
TRA2B-212ENST00000480461 DTX3LQ8TDB6 740 aa12.14□□□□□ -0.47
TRA2B-212ENST00000480461 STYXQ8WUJ0 223 aa12.14□□□□□ -0.47
TRA2B-212ENST00000480461 HDAC10Q969S8 669 aa12.14□□□□□ -0.47
TRA2B-212ENST00000480461 CCDC97Q96F63 343 aaPredicted RBP12.14□□□□□ -0.47
TRA2B-212ENST00000480461 PLEKHG4BQ96PX9 1271 aa12.14□□□□□ -0.47
TRA2B-212ENST00000480461 SPATA16Q9BXB7 569 aa12.14□□□□□ -0.47
TRA2B-212ENST00000480461 C1QTNF7Q9BXJ2 289 aa12.14□□□□□ -0.47
TRA2B-212ENST00000480461 IL22Q9GZX6 179 aa12.14□□□□□ -0.47
TRA2B-212ENST00000480461 XAB2Q9HCS7 855 aaKnown RBP12.14□□□□□ -0.47
TRA2B-212ENST00000480461 RIMKLBQ9ULI2 386 aa12.14□□□□□ -0.47
TRA2B-212ENST00000480461 SOX13Q9UN79 622 aa12.14□□□□□ -0.47
TRA2B-212ENST00000480461 TMEM98Q9Y2Y6 226 aa12.14□□□□□ -0.47
TRA2B-212ENST00000480461 UTP11Q9Y3A2 253 aaKnown RBP12.14□□□□□ -0.47
TRA2B-212ENST00000480461 PKP3Q9Y446 797 aa12.14□□□□□ -0.47
TRA2B-212ENST00000480461 MAST4O15021 2626 aa12.14□□□□□ -0.47
TRA2B-212ENST00000480461 PCDH15Q96QU1 1955 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 GLYATL1P3A0A0U1RQE8 302 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 SPTY2D1-AS1A0A0U1RR47 76 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 HEATR9A2RTY3 570 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 AGAP14A8MT82 685 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 H7C0S8 307 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 AP3B1O00203 1094 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 ARHGAP33O14559 1287 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 PPFIA2O75334 1257 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 SRP72O76094 671 aaKnown RBP12.13□□□□□ -0.47
TRA2B-212ENST00000480461 CEACAM5P06731 702 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 RHOXF2BP0C7M4 288 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 TSHRP16473 764 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 TEAD1P28347 426 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 ECHS1P30084 290 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 SPAM1P38567 509 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 RABIFP47224 123 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 ARCN1P48444 511 aaKnown RBP12.13□□□□□ -0.47
TRA2B-212ENST00000480461 CARSP49589 748 aaKnown RBP12.13□□□□□ -0.47
TRA2B-212ENST00000480461 PLTPP55058 493 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 YPEL5P62699 121 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 CDK3Q00526 305 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 GRIK2Q13002 908 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 FASTKD3Q14CZ7 662 aaKnown RBP12.13□□□□□ -0.47
TRA2B-212ENST00000480461 SKIDA1Q1XH10 827 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 ZNF423Q2M1K9 1284 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 HLA-BQ31612 363 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 ANKRD20A4Q4UJ75 823 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 RAET1GQ6H3X3 334 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 PTAR1Q7Z6K3 402 aaPredicted RBP12.13□□□□□ -0.47
TRA2B-212ENST00000480461 TMEM135Q86UB9 458 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 UNC5BQ8IZJ1 945 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 TRAM1L1Q8N609 369 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 ZNF398Q8TD17 642 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 NAT14Q8WUY8 206 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 BTN2A2Q8WVV5 523 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 OR1E3Q8WZA6 343 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 C19orf43Q9BQ61 176 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 RHOXF2Q9BQY4 288 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 RAB17Q9H0T7 212 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 CDH19Q9H159 772 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 TCEAL2Q9H3H9 227 aaPredicted RBP12.13□□□□□ -0.47
TRA2B-212ENST00000480461 MRPL40Q9NQ50 206 aaKnown RBP12.13□□□□□ -0.47
TRA2B-212ENST00000480461 RRAGDQ9NQL2 400 aaPredicted RBP12.13□□□□□ -0.47
TRA2B-212ENST00000480461 KCTD5Q9NXV2 234 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 SUSD2Q9UGT4 822 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 TEX264Q9Y6I9 313 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 MYLKQ15746 1914 aa12.13□□□□□ -0.47
TRA2B-212ENST00000480461 APC2O95996 2303 aa12.12□□□□□ -0.47
TRA2B-212ENST00000480461 KNL1Q8NG31 2342 aa12.12□□□□□ -0.47
TRA2B-212ENST00000480461 ZCWPW2A0A1B0GU75 182 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms