RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 RAB11FIP2Q7L804 512 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 DSG4Q86SJ6 1040 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 ZDHHC17Q8IUH5 632 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 EPHX4Q8IUS5 362 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 LACC1Q8IV20 430 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 ADGRG2Q8IZP9 1017 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 CRYBG2Q8N1P7 616 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 SRBD1Q8N5C6 995 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 TTLL6Q8N841 843 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 NIPA2Q8N8Q9 360 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 Q8N9G6 341 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 ZNF527Q8NB42 609 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 AVL9Q8NBF6 648 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 TCP10LQ8TDR4 215 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 FIG4Q92562 907 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 GTF3AQ92664 365 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 RFKQ969G6 155 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 ISOC1Q96CN7 298 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 VPS39Q96JC1 886 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 RIPOR3Q96MK2 946 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 C19orf43Q9BQ61 176 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 ZNF416Q9BWM5 594 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 CHID1Q9BWS9 393 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 CDK19Q9BWU1 502 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 ROPN1BQ9BZX4 212 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 OSGEPL1Q9H4B0 414 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 SMOC1Q9H4F8 434 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 ROPN1Q9HAT0 212 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 PCDHB16Q9NRJ7 776 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 RBM12Q9NTZ6 932 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 ING3Q9NXR8 418 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 GLTPQ9NZD2 209 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 CCDC59Q9P031 241 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 ZFP69BQ9UJL9 534 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 ANGEL1Q9UNK9 670 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 ZFR2Q9UPR6 939 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 RUVBL1Q9Y265 456 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 GDAQ9Y2T3 454 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 PCDHGB6Q9Y5F9 930 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 AP1M2Q9Y6Q5 423 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 ITSN1Q15811 1721 aa5.96□□□□□ -1.45
ECHDC1-215ENST00000475319 DISP2A7MBM2 1401 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 SSU72P8A0A1W2PR75 194 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 TMEM82A0PJX8 343 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 PMS2P1A4D2B8 440 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 TRIM38O00635 465 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 FPGTO14772 594 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 MAGEB2O15479 319 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 SOCS5O75159 536 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 GYPCP04921 128 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 FABP1P07148 127 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 PFKMP08237 780 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 TMEM253P0C7T8 217 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 TRAPPC2P0DI81 140 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 TRAPPC2BP0DI82 140 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 IFNAR1P17181 557 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 TFEBP19484 476 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 FPR2P25090 351 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 CD40P25942 277 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 NMT1P30419 496 aaKnown RBP5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 CYP2C18P33260 490 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 EIF2S3P41091 472 aaKnown RBP5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 CASP3P42574 277 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 SLC15A1P46059 708 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 GNPDA1P46926 289 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 MTNR1BP49286 362 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 PRIM2P49643 509 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 SERPINH1P50454 418 aaKnown RBP5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 RAB13P51153 203 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 NDUFA8P51970 172 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 MYBPC1Q00872 1141 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 ALDH6A1Q02252 535 aaKnown RBP5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 MGAT5Q09328 741 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 DBPQ10586 325 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 STX5Q13190 355 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 PRKG2Q13237 762 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 SNAPC2Q13487 334 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 CHRNA2Q15822 529 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 HADHQ16836 314 aaKnown RBP5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 ZNF568Q3ZCX4 644 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 SLC9C1Q4G0N8 1177 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 AASDHQ4L235 1098 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 DNAL1Q4LDG9 190 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 YIF1BQ5BJH7 314 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 FAM91A1Q658Y4 838 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 TTI2Q6NXR4 508 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 RFWD3Q6PCD5 774 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 CLEC2AQ6UVW9 174 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 KYAT3Q6YP21 454 aaKnown RBP5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 ZNF852Q6ZMS4 543 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 RGS9BPQ6ZS82 235 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 C1orf122Q6ZSJ8 110 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 PRSS42Q7Z5A4 293 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 IGFN1Q86VF2 1251 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 ARMC8Q8IUR7 673 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 C16orf71Q8IYS4 520 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 ULK2Q8IYT8 1036 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 ZNF619Q8N2I2 560 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 NAT16Q8N8M0 369 aa5.96□□□□□ -1.46
ECHDC1-215ENST00000475319 MARCH10Q8NA82 808 aaPredicted RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms