RNA–Protein interactions for RNA: ENST00000469565.6

LMNA-210, Transcript of lamin A/C, human

TSL 4

Gene LMNA, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-210	ENST00000469565	OVGP1	Q12889	678 aa		13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	PEX6	Q13608	980 aa		13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	ITGA9	Q13797	1035 aa		13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	PTK2B	Q14289	1009 aa		13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	PRAMEF14	Q5SWL7	426 aa		13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	TCEAL6	Q6IPX3	200 aa		13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	ENPP7	Q6UWV6	458 aa		13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	ZDHHC24	Q6UX98	284 aa		13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	ZBED8	Q8IZ13	594 aa		13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	AGGF1	Q8N302	714 aa	eCLIP	13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	OR13J1	Q8NGT2	312 aa		13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	SEC14L1	Q92503	715 aa		13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	TCEAL3	Q969E4	200 aa		13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	FUBP1	Q96AE4	644 aa	Known RBP	13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	EBNA1BP2	Q99848	306 aa	Known RBP	13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	LGR4	Q9BXB1	951 aa		13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	RXFP3	Q9NSD7	469 aa		13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	CRLS1	Q9UJA2	301 aa		13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	RIMKLB	Q9ULI2	386 aa		13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	TMEM98	Q9Y2Y6	226 aa		13.54	□□□□□ -0.24
LMNA-210	ENST00000469565		V9GYY5	206 aa	Predicted RBP	13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	ASPM	Q8IZT6	3477 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	FAM237B	A0A1B0GVD1	139 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	TOR1B	O14657	336 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	VAPB	O95292	243 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	SOD1	P00441	154 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	POLB	P06746	335 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	SYP	P08247	313 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	MYCLP1	P12525	358 aa	Predicted RBP	13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	PGAM1	P18669	254 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	TRIM23	P36406	574 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	CDKN1C	P49918	316 aa	Predicted RBP	13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	ATXN3	P54252	364 aa	Predicted RBP	13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	XIAP	P98170	497 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	NFATC4	Q14934	902 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	KIF19	Q2TAC6	998 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	ANKRD20A4	Q4UJ75	823 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	ZNF542P	Q5EBM4	170 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	ZNF648	Q5T619	568 aa	Predicted RBP	13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	PEAR1	Q5VY43	1037 aa	Predicted RBP	13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	SLC23A3	Q6PIS1	610 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	AFTPH	Q6ULP2	937 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	ADAMTSL4	Q6UY14	1074 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	CAPN12	Q6ZSI9	719 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	RD3	Q7Z3Z2	195 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	IQCH	Q86VS3	1027 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	DCP2	Q8IU60	420 aa	Known RBP	13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	IGDCC3	Q8IVU1	814 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	PALM2	Q8IXS6	379 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	KDF1	Q8NAX2	398 aa	Predicted RBP	13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	FBXO36	Q8NEA4	188 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	PYROXD1	Q8WU10	500 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	BTN2A2	Q8WVV5	523 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	UBXN4	Q92575	508 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	GLYATL1	Q969I3	302 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	13.53	□□□□□ -0.24	7e-6	■■■■■ 27.5
LMNA-210	ENST00000469565	WDR92	Q96MX6	357 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	FCRL3	Q96P31	734 aa	Predicted RBP	13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	GTPBP2	Q9BX10	602 aa	Known RBP	13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	TEX101	Q9BY14	249 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	GDF3	Q9NR23	364 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	TREX1	Q9NSU2	369 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	ZC3H7B	Q9UGR2	993 aa	Known RBP	13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	NFU1	Q9UMS0	254 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	SNX11	Q9Y5W9	270 aa		13.53	□□□□□ -0.24
LMNA-210	ENST00000469565	FAM208B	Q5VWN6	2430 aa		13.52	□□□□□ -0.24
LMNA-210	ENST00000469565	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.52	□□□□□ -0.25
LMNA-210	ENST00000469565	GOLGA8K	D6RF30	607 aa		13.52	□□□□□ -0.25
LMNA-210	ENST00000469565	GOLGA8T	H3BQL2	631 aa		13.52	□□□□□ -0.25
LMNA-210	ENST00000469565		H7C0S8	307 aa		13.52	□□□□□ -0.25
LMNA-210	ENST00000469565	GAPDHS	O14556	408 aa	Predicted RBP	13.52	□□□□□ -0.25
LMNA-210	ENST00000469565	SCAMP1	O15126	338 aa		13.52	□□□□□ -0.25
LMNA-210	ENST00000469565	MTX2	O75431	263 aa		13.52	□□□□□ -0.25
LMNA-210	ENST00000469565	USP1	O94782	785 aa		13.52	□□□□□ -0.25
LMNA-210	ENST00000469565	PRSS56	P0CW18	603 aa		13.52	□□□□□ -0.25
LMNA-210	ENST00000469565	KEL	P23276	732 aa		13.52	□□□□□ -0.25
LMNA-210	ENST00000469565	TEAD1	P28347	426 aa		13.52	□□□□□ -0.25
LMNA-210	ENST00000469565	POLD2	P49005	469 aa		13.52	□□□□□ -0.25
LMNA-210	ENST00000469565	NXPH1	P58417	271 aa		13.52	□□□□□ -0.25
LMNA-210	ENST00000469565	TUBB4B	P68371	445 aa		13.52	□□□□□ -0.25
LMNA-210	ENST00000469565	CACNG1	Q06432	222 aa		13.52	□□□□□ -0.25
LMNA-210	ENST00000469565	GRIK2	Q13002	908 aa		13.52	□□□□□ -0.25
LMNA-210	ENST00000469565	NFATC2	Q13469	925 aa		13.52	□□□□□ -0.25
LMNA-210	ENST00000469565	CUL1	Q13616	776 aa		13.52	□□□□□ -0.25
LMNA-210	ENST00000469565	THOC5	Q13769	683 aa	Known RBP	13.52	□□□□□ -0.25
LMNA-210	ENST00000469565	FASTKD3	Q14CZ7	662 aa	Known RBP	13.52	□□□□□ -0.25
LMNA-210	ENST00000469565	FASTKD1	Q53R41	847 aa	Known RBP	13.52	□□□□□ -0.25
LMNA-210	ENST00000469565	TPRG1L	Q5T0D9	272 aa		13.52	□□□□□ -0.25
LMNA-210	ENST00000469565	PDPK2P	Q6A1A2	396 aa		13.52	□□□□□ -0.25
LMNA-210	ENST00000469565	PSAPL1	Q6NUJ1	521 aa		13.52	□□□□□ -0.25
LMNA-210	ENST00000469565	MARK2	Q7KZI7	788 aa	Known RBP	13.52	□□□□□ -0.25
LMNA-210	ENST00000469565	SNX20	Q7Z614	316 aa		13.52	□□□□□ -0.25
LMNA-210	ENST00000469565	SPATS2	Q86XZ4	545 aa	Known RBP	13.52	□□□□□ -0.25
LMNA-210	ENST00000469565	PHYKPL	Q8IUZ5	450 aa		13.52	□□□□□ -0.25
LMNA-210	ENST00000469565	HID1	Q8IV36	788 aa		13.52	□□□□□ -0.25
LMNA-210	ENST00000469565	SLC22A18AS	Q8N1D0	253 aa		13.52	□□□□□ -0.25
LMNA-210	ENST00000469565	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	13.52	□□□□□ -0.25	7e-8	■■■■■ 33.6

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