RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 SLC9A2Q9UBY0 812 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 ACSL5Q9ULC5 683 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 PCDHGB1Q9Y5G3 927 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 CLIC4Q9Y696 253 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 ZNF644Q9H582 1327 aaPredicted RBP4.11□□□□□ -1.75
CLK1-208ENST00000464454 hDV102S1A0JD36 115 aa4.1□□□□□ -1.75
CLK1-208ENST00000464454 SYNDIG1LA6NDD5 238 aa4.1□□□□□ -1.75
CLK1-208ENST00000464454 A8MV72 311 aaPredicted RBP4.1□□□□□ -1.75
CLK1-208ENST00000464454 H3BQ06 376 aaPredicted RBP4.1□□□□□ -1.75
CLK1-208ENST00000464454 M0QZ24 198 aa4.1□□□□□ -1.75
CLK1-208ENST00000464454 P4HA2O15460 535 aa4.1□□□□□ -1.75
CLK1-208ENST00000464454 EIF5BO60841 1220 aaKnown RBP4.1□□□□□ -1.75
CLK1-208ENST00000464454 LMAN1P49257 510 aa4.1□□□□□ -1.75
CLK1-208ENST00000464454 GPR143P51810 404 aa4.1□□□□□ -1.75
CLK1-208ENST00000464454 GAS1P54826 345 aa4.1□□□□□ -1.75
CLK1-208ENST00000464454 FOXM1Q08050 763 aa4.1□□□□□ -1.75
CLK1-208ENST00000464454 MYBPHQ13203 477 aa4.1□□□□□ -1.75
CLK1-208ENST00000464454 KCNC3Q14003 757 aa4.1□□□□□ -1.75
CLK1-208ENST00000464454 DHX34Q14147 1143 aaKnown RBP4.1□□□□□ -1.75
CLK1-208ENST00000464454 PCLAFQ15004 111 aa4.1□□□□□ -1.75
CLK1-208ENST00000464454 ATP13A5Q4VNC0 1218 aa4.1□□□□□ -1.75
CLK1-208ENST00000464454 ZNF805Q5CZA5 627 aa4.1□□□□□ -1.75
CLK1-208ENST00000464454 RARS2Q5T160 578 aaKnown RBP4.1□□□□□ -1.75
CLK1-208ENST00000464454 DCST1Q5T197 706 aa4.1□□□□□ -1.75
CLK1-208ENST00000464454 SLC36A4Q6YBV0 504 aa4.1□□□□□ -1.75
CLK1-208ENST00000464454 KRT74Q7RTS7 529 aa4.1□□□□□ -1.75
CLK1-208ENST00000464454 SDCCAG8Q86SQ7 713 aaPredicted RBP4.1□□□□□ -1.75
CLK1-208ENST00000464454 ARID3BQ8IVW6 561 aaPredicted RBP4.1□□□□□ -1.75
CLK1-208ENST00000464454 MCEMP1Q8IX19 187 aa4.1□□□□□ -1.75
CLK1-208ENST00000464454 SCML4Q8N228 414 aa4.1□□□□□ -1.75
CLK1-208ENST00000464454 MAGEC3Q8TD91 643 aa4.1□□□□□ -1.75
CLK1-208ENST00000464454 TRPC4APQ8TEL6 797 aa4.1□□□□□ -1.75
CLK1-208ENST00000464454 PRPF31Q8WWY3 499 aaKnown RBP4.1□□□□□ -1.75
CLK1-208ENST00000464454 APBB2Q92870 758 aa4.1□□□□□ -1.75
CLK1-208ENST00000464454 SLC22A18Q96BI1 424 aa4.1□□□□□ -1.75
CLK1-208ENST00000464454 ADGRG7Q96K78 797 aa4.1□□□□□ -1.75
CLK1-208ENST00000464454 EGLN2Q96KS0 407 aa4.1□□□□□ -1.75
CLK1-208ENST00000464454 ZNF385AQ96PM9 386 aaKnown RBP4.1□□□□□ -1.75
CLK1-208ENST00000464454 CTAGE1Q96RT6 745 aa4.1□□□□□ -1.75
CLK1-208ENST00000464454 SIL1Q9H173 461 aa4.1□□□□□ -1.75
CLK1-208ENST00000464454 EPB41L5Q9HCM4 733 aa4.1□□□□□ -1.75
CLK1-208ENST00000464454 LOC100509620A0A075B734 347 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 PLSCR5A0PG75 271 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 SH2B2O14492 632 aaPredicted RBP4.09□□□□□ -1.75
CLK1-208ENST00000464454 TCERG1O14776 1098 aaKnown RBP4.09□□□□□ -1.75
CLK1-208ENST00000464454 SMAD9O15198 467 aaKnown RBP4.09□□□□□ -1.75
CLK1-208ENST00000464454 SLC16A5O15375 505 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 SPINT2O43291 252 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 NDUFS7O75251 213 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 ZBTB11O95625 1053 aaPredicted RBP4.09□□□□□ -1.75
CLK1-208ENST00000464454 EGFP01133 1207 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 ICAM1P05362 532 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 TUBBP07437 444 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 BDKRB2P30411 391 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 MSH2P43246 934 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 HSD17B4P51659 736 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 STAT2P52630 851 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 HNRNPH2P55795 449 aaKnown RBP4.09□□□□□ -1.75
CLK1-208ENST00000464454 PSMC6P62333 389 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 DDR1Q08345 913 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 SREBF2Q12772 1141 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 GRSF1Q12849 480 aaKnown RBP eCLIP4.09□□□□□ -1.75
CLK1-208ENST00000464454 CDC16Q13042 620 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 MAD2L1Q13257 205 aaPredicted RBP4.09□□□□□ -1.75
CLK1-208ENST00000464454 SNTA1Q13424 505 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 C15orf59Q2T9L4 293 aaPredicted RBP4.09□□□□□ -1.75
CLK1-208ENST00000464454 KLHL22Q53GT1 634 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 BMP2KLQ5H9B9 411 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 GARNL3Q5VVW2 1013 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 C9orf57Q5W0N0 161 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 FRG2Q64ET8 278 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 NAA16Q6N069 864 aaPredicted RBP4.09□□□□□ -1.75
CLK1-208ENST00000464454 DUS1LQ6P1R4 473 aaKnown RBP4.09□□□□□ -1.75
CLK1-208ENST00000464454 KRBA2Q6ZNG9 492 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 C18orf65Q6ZTR6 163 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 C16orf82Q7Z2V1 217 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 ADGRA1Q86SQ6 560 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 SCYL3Q8IZE3 742 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 PGBD5Q8N414 524 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 SYT2Q8N9I0 419 aaPredicted RBP4.09□□□□□ -1.75
CLK1-208ENST00000464454 IL17RCQ8NAC3 791 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 ZNF114Q8NC26 417 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 HM13Q8TCT9 377 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 WFIKKN2Q8TEU8 576 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 RND1Q92730 232 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 ORAI1Q96D31 301 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 KRTAP1-5Q9BYS1 174 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 TMEM39BQ9GZU3 492 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 IL25Q9H293 177 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 PIGMQ9H3S5 423 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 PSD3Q9NYI0 1048 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 SMARCAL1Q9NZC9 954 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 PTRH2Q9Y3E5 179 aaKnown RBP4.09□□□□□ -1.75
CLK1-208ENST00000464454 SNX9Q9Y5X1 595 aa4.09□□□□□ -1.75
CLK1-208ENST00000464454 GOLGA6L9A6NEM1 432 aa4.08□□□□□ -1.76
CLK1-208ENST00000464454 GLOD5A6NK44 160 aa4.08□□□□□ -1.76
CLK1-208ENST00000464454 SOCS6O14544 535 aa4.08□□□□□ -1.76
CLK1-208ENST00000464454 MAP2K7O14733 419 aa4.08□□□□□ -1.76
CLK1-208ENST00000464454 PAPSS1O43252 624 aaPredicted RBP4.08□□□□□ -1.76
CLK1-208ENST00000464454 PLRG1O43660 514 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms