RNA–Protein interactions for RNA: ENST00000463003.1

CHAMP1-202, Transcript of chromosome alignment maintaining phosphoprotein 1, humanhuman

TSL 3

Gene CHAMP1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1-202ENST00000463003 TRMT1LQ7Z2T5 733 aaKnown RBP3.82□□□□□ -1.8
CHAMP1-202ENST00000463003 ATG9AQ7Z3C6 839 aa3.82□□□□□ -1.8
CHAMP1-202ENST00000463003 SDCCAG8Q86SQ7 713 aaPredicted RBP3.82□□□□□ -1.8
CHAMP1-202ENST00000463003 NFE4Q86UQ8 179 aa3.82□□□□□ -1.8
CHAMP1-202ENST00000463003 FRMD1Q8N878 549 aa3.82□□□□□ -1.8
CHAMP1-202ENST00000463003 POLR3CQ9BUI4 534 aaPredicted RBP3.82□□□□□ -1.8
CHAMP1-202ENST00000463003 ZNF334Q9HCZ1 680 aaPredicted RBP3.82□□□□□ -1.8
CHAMP1-202ENST00000463003 PIAS3Q9Y6X2 628 aa3.82□□□□□ -1.8
CHAMP1-202ENST00000463003 J3KRW8 73 aa3.81□□□□□ -1.8
CHAMP1-202ENST00000463003 HS3ST1O14792 307 aa3.81□□□□□ -1.8
CHAMP1-202ENST00000463003 ATP2A1O14983 1001 aa3.81□□□□□ -1.8
CHAMP1-202ENST00000463003 JRKO75564 520 aa3.81□□□□□ -1.8
CHAMP1-202ENST00000463003 SLC25A12O75746 678 aa3.81□□□□□ -1.8
CHAMP1-202ENST00000463003 CD4P01730 458 aa3.81□□□□□ -1.8
CHAMP1-202ENST00000463003 FAM106CPP0CH98 169 aa3.81□□□□□ -1.8
CHAMP1-202ENST00000463003 CD53P19397 219 aa3.81□□□□□ -1.8
CHAMP1-202ENST00000463003 NR1D1P20393 614 aa3.81□□□□□ -1.8
CHAMP1-202ENST00000463003 AMPHP49418 695 aa3.81□□□□□ -1.8
CHAMP1-202ENST00000463003 LINC01547P58512 204 aaPredicted RBP3.81□□□□□ -1.8
CHAMP1-202ENST00000463003 TMEM35AQ53FP2 167 aa3.81□□□□□ -1.8
CHAMP1-202ENST00000463003 KRTCAP3Q53RY4 240 aa3.81□□□□□ -1.8
CHAMP1-202ENST00000463003 SIRPB2Q5JXA9 342 aa3.81□□□□□ -1.8
CHAMP1-202ENST00000463003 LRIF1Q5T3J3 769 aa3.81□□□□□ -1.8
CHAMP1-202ENST00000463003 PAPD4Q6PIY7 484 aaKnown RBP3.81□□□□□ -1.8
CHAMP1-202ENST00000463003 MAP7D3Q8IWC1 876 aa3.81□□□□□ -1.8
CHAMP1-202ENST00000463003 OR52I2Q8NH67 350 aa3.81□□□□□ -1.8
CHAMP1-202ENST00000463003 TDRD7Q8NHU6 1098 aaKnown RBP3.81□□□□□ -1.8
CHAMP1-202ENST00000463003 THAP6Q8TBB0 222 aa3.81□□□□□ -1.8
CHAMP1-202ENST00000463003 ZKSCAN4Q969J2 545 aaPredicted RBP3.81□□□□□ -1.8
CHAMP1-202ENST00000463003 SMC6Q96SB8 1091 aa3.81□□□□□ -1.8
CHAMP1-202ENST00000463003 LRRC1Q9BTT6 524 aa3.81□□□□□ -1.8
CHAMP1-202ENST00000463003 PDZD7Q9H5P4 517 aa3.81□□□□□ -1.8
CHAMP1-202ENST00000463003 IRAK4Q9NWZ3 460 aa3.81□□□□□ -1.8
CHAMP1-202ENST00000463003 STK39Q9UEW8 545 aa3.81□□□□□ -1.8
CHAMP1-202ENST00000463003 FAF1Q9UNN5 650 aaPredicted RBP3.81□□□□□ -1.8
CHAMP1-202ENST00000463003 A0A1W2PP11 408 aa3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 CTAGE9A4FU28 777 aa3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 SERINC4A6NH21 518 aa3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 B4E171 279 aa3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 H3BQ06 376 aaPredicted RBP3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 DVL1O14640 695 aa3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 EIF3DO15371 548 aaKnown RBP eCLIP3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 KCNN4O15554 427 aa3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 TMEM63AO94886 807 aa3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 ICAM1P05362 532 aa3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 CTAGE8P0CG41 777 aa3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 UGT1A1P22309 533 aa3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 TIMP3P35625 211 aa3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 TSPAN7P41732 249 aa3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 DVL1P1P54792 670 aaPredicted RBP3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 PLIN5Q00G26 463 aa3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 GOLGA8DPQ0D2H9 430 aa3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 DMP1Q13316 513 aaPredicted RBP3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 RBM39Q14498 530 aaKnown RBP3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 PNLIPRP3Q17RR3 467 aa3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 ZNF805Q5CZA5 627 aa3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 NSUN5P2Q63ZY6 315 aa3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 LCN10Q6JVE6 187 aa3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 ZNF449Q6P9G9 518 aa3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 TMTC3Q6ZXV5 915 aa3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 PXKQ7Z7A4 578 aa3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 ARHGAP12Q8IWW6 846 aa3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 CTAGE4Q8IX94 777 aa3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 METTL27Q8N6F8 245 aaPredicted RBP3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 OR1J2Q8NGS2 313 aa3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 LINGO1Q96FE5 620 aa3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 EGLN2Q96KS0 407 aa3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 C7orf26Q96N11 449 aa3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 NEURL2Q9BR09 285 aa3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 KRTAP4-4Q9BYR3 166 aa3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 HCFC1R1Q9NWW0 138 aa3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 CWC15Q9P013 229 aaKnown RBP3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 KLHL9Q9P2J3 617 aa3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 R3HDM2Q9Y2K5 976 aaKnown RBP3.8□□□□□ -1.8
CHAMP1-202ENST00000463003 ZCWPW2A0A1B0GU75 182 aa3.79□□□□□ -1.8
CHAMP1-202ENST00000463003 EIF4E1BA6NMX2 242 aaKnown RBP3.79□□□□□ -1.8
CHAMP1-202ENST00000463003 TMEM178BH3BS89 294 aa3.79□□□□□ -1.8
CHAMP1-202ENST00000463003 EIF2S1P05198 315 aaKnown RBP3.79□□□□□ -1.8
CHAMP1-202ENST00000463003 CFC1BP0CG36 223 aa3.79□□□□□ -1.8
CHAMP1-202ENST00000463003 CFC1P0CG37 223 aa3.79□□□□□ -1.8
CHAMP1-202ENST00000463003 HSPA1AP0DMV8 641 aaKnown RBP3.79□□□□□ -1.8
CHAMP1-202ENST00000463003 HSPA1BP0DMV9 641 aaKnown RBP3.79□□□□□ -1.8
CHAMP1-202ENST00000463003 FGF5P12034 268 aa3.79□□□□□ -1.8
CHAMP1-202ENST00000463003 GLIPR1P48060 266 aa3.79□□□□□ -1.8
CHAMP1-202ENST00000463003 TAS2R40P59535 323 aa3.79□□□□□ -1.8
CHAMP1-202ENST00000463003 KRTAP10-12P60413 245 aa3.79□□□□□ -1.8
CHAMP1-202ENST00000463003 EEF1A1P68104 462 aaKnown RBP3.79□□□□□ -1.8
CHAMP1-202ENST00000463003 MRPS34P82930 218 aaKnown RBP3.79□□□□□ -1.8
CHAMP1-202ENST00000463003 RPL24P83731 157 aaKnown RBP3.79□□□□□ -1.8
CHAMP1-202ENST00000463003 PDE1CQ14123 709 aaPredicted RBP3.79□□□□□ -1.8
CHAMP1-202ENST00000463003 MYLK3Q32MK0 819 aa3.79□□□□□ -1.8
CHAMP1-202ENST00000463003 PDSS1Q5T2R2 415 aa3.79□□□□□ -1.8
CHAMP1-202ENST00000463003 EEF1A1P5Q5VTE0 462 aa3.79□□□□□ -1.8
CHAMP1-202ENST00000463003 ZNF704Q6ZNC4 412 aaPredicted RBP3.79□□□□□ -1.8
CHAMP1-202ENST00000463003 EPHX4Q8IUS5 362 aa3.79□□□□□ -1.8
CHAMP1-202ENST00000463003 KLHDC8BQ8IXV7 354 aa3.79□□□□□ -1.8
CHAMP1-202ENST00000463003 ADSSL1Q8N142 457 aa3.79□□□□□ -1.8
CHAMP1-202ENST00000463003 HM13Q8TCT9 377 aa3.79□□□□□ -1.8
CHAMP1-202ENST00000463003 UTP15Q8TED0 518 aaKnown RBP3.79□□□□□ -1.8
CHAMP1-202ENST00000463003 UCMAQ8WVF2 138 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms