RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 GAGE12GP0CL81 117 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 GAGE12IP0CL82 117 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 CTPS1P17812 591 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 PNPLA4P41247 253 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 PTPN9P43378 593 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 ZNF132P52740 706 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 PHEXP78562 749 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 SLC18A2Q05940 514 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 GAGE1Q13065 139 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 GAGE4Q13068 117 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 THOC5Q13769 683 aaKnown RBP2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 CCL15Q16663 113 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 ME3Q16798 604 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 KRT71Q3SY84 523 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 SULT6B1Q6IMI4 303 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 SYT13Q7L8C5 426 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 RASGRP2Q7LDG7 609 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 DENND6AQ8IWF6 608 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 ZNF441Q8N8Z8 693 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 ATG16L2Q8NAA4 619 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 SETD9Q8NE22 299 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 ZMIZ2Q8NF64 920 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 LRRC8CQ8TDW0 803 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 NCSTNQ92542 709 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 LRFN5Q96NI6 719 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 MMTAG2Q9BU76 263 aaKnown RBP2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 HERC2P3Q9BVR0 1158 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 GAB2Q9UQC2 676 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 CLDN16Q9Y5I7 305 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 COL4A1P02462 1669 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 ABCC11Q96J66 1382 aa2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 hDV102S1A0JD36 115 aa2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 CPED1A4D0V7 1026 aa2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 FAM172BPA6NC97 362 aa2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 E7EVH7 732 aa2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 H0Y3Z8 333 aa2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 SLC25A17O43808 307 aa2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 HBP1O60381 514 aa2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 KDM4BO94953 1096 aa2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 LDLRP01130 860 aa2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 MYL1P05976 194 aa2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 CA3P07451 260 aa2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 CSF1P09603 554 aa2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 CFC1BP0CG36 223 aa2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 CFC1P0CG37 223 aa2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 CENPAP49450 140 aa2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 VEGFCP49767 419 aa2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 ECT2LQ008S8 904 aa2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 SMAD1Q15797 465 aaKnown RBP2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 PRR5LQ6MZQ0 368 aa2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 XRRA1Q6P2D8 792 aa2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 MARK2Q7KZI7 788 aaKnown RBP2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 MON1AQ86VX9 555 aa2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 TICAM1Q8IUC6 712 aa2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 PIGBQ92521 554 aa2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 USP13Q92995 863 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 RNF183Q96D59 192 aa2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 CCDC136Q96JN2 1154 aa2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 DUX3Q96PT4 197 aa2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 MTIF3Q9H2K0 278 aaKnown RBP2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 RRP7BPQ9NSQ0 103 aa2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 GEMIN8Q9NWZ8 242 aaKnown RBP2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 SMARCAL1Q9NZC9 954 aa2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 NEUROG3Q9Y4Z2 214 aa2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 SNX9Q9Y5X1 595 aa2.91□□□□□ -1.94
HMGB1P18-201ENST00000438801 KIAA1109Q2LD37 5005 aa2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 P2RY10O00398 339 aa2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 ACKR2O00590 384 aa2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 ZG16O60844 167 aa2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 CLDN14O95500 239 aa2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 SERPINC1P01008 464 aa2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 SP9P0CG40 484 aa2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 LIFRP42702 1097 aa2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 NOVA1P51513 510 aaKnown RBP2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 ZBTB17Q13105 803 aa2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 PUM3Q15397 648 aaKnown RBP2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 ACCSLQ4AC99 568 aa2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 TAF1BQ53T94 588 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 KLHDC8BQ8IXV7 354 aa2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 GHDCQ8N2G8 530 aa2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 ARRDC2Q8TBH0 407 aa2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 GDPD5Q8WTR4 605 aa2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 TAF15Q92804 592 aaKnown RBP eCLIP2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 FBXO17Q96EF6 278 aa2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 KTI12Q96EK9 354 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 YME1L1Q96TA2 773 aa2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 CSF3RQ99062 836 aa2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 ELAC2Q9BQ52 826 aaKnown RBP2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 WDR12Q9GZL7 423 aaKnown RBP2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 CTDSP1Q9GZU7 261 aa2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 ARNT2Q9HBZ2 717 aa2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 ANKRD10Q9NXR5 420 aa2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 DACT1Q9NYF0 836 aa2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 ZNF224Q9NZL3 707 aa2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 HDAC6Q9UBN7 1215 aa2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 LRCH1Q9Y2L9 728 aa2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 MMP24Q9Y5R2 645 aa2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 ACANP16112 2415 aa2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 MYO16Q9Y6X6 1858 aa2.9□□□□□ -1.95
HMGB1P18-201ENST00000438801 PRRC2CQ9Y520 2896 aaKnown RBP2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms