RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 DDHD1Q8NEL9 900 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 SPATA22Q8NHS9 363 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 IFI44Q8TCB0 444 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 ZFPM2Q8WW38 1151 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 ANP32BQ92688 251 aaKnown RBP9.06□□□□□ -0.96
SMC1A-203ENST00000428014 SCAMP4Q969E2 229 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 GLYATL1Q969I3 302 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 SH3KBP1Q96B97 665 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 NAP1L3Q99457 506 aaPredicted RBP9.06□□□□□ -0.96
SMC1A-203ENST00000428014 DESI2Q9BSY9 194 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 RIOK2Q9BVS4 552 aaKnown RBP9.06□□□□□ -0.96
SMC1A-203ENST00000428014 HEMGNQ9BXL5 484 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 GPR63Q9BZJ6 419 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 CARS2Q9HA77 564 aaKnown RBP9.06□□□□□ -0.96
SMC1A-203ENST00000428014 SEPT10Q9P0V9 454 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 SUFUQ9UMX1 484 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 GUCA1BQ9UMX6 200 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 PKP3Q9Y446 797 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 FAM208BQ5VWN6 2430 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 ZFC3H1O60293 1989 aaKnown RBP9.06□□□□□ -0.96
SMC1A-203ENST00000428014 SCN8AQ9UQD0 1980 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 UNC13CQ8NB66 2214 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 ZNF106Q9H2Y7 1883 aaKnown RBP9.05□□□□□ -0.96
SMC1A-203ENST00000428014 A6NCN8 305 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 KMOO15229 486 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 FFAR2O15552 330 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 KCNN4O15554 427 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 ZSCAN12O43309 604 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 LIASO43766 372 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 PMPCBO75439 489 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 AP2A1O95782 977 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 BPIP17213 487 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 ACTN2P35609 894 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 SPAM1P38567 509 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 ADCY8P40145 1251 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 EPHA4P54764 986 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 DNAJC3Q13217 504 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 SIRPB2Q5JXA9 342 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 AGAP9Q5VTM2 703 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 DARS2Q6PI48 645 aaKnown RBP9.05□□□□□ -0.96
SMC1A-203ENST00000428014 RBM44Q6ZP01 1051 aaKnown RBP9.05□□□□□ -0.96
SMC1A-203ENST00000428014 GLT6D1Q7Z4J2 308 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 TAF8Q7Z7C8 310 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 NRROSQ86YC3 692 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 GALNT13Q8IUC8 556 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 PELI3Q8N2H9 469 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 SFRP1Q8N474 314 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 GPR26Q8NDV2 337 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 SNIP1Q8TAD8 396 aaKnown RBP9.05□□□□□ -0.96
SMC1A-203ENST00000428014 TSACCQ96A04 125 aaPredicted RBP9.05□□□□□ -0.96
SMC1A-203ENST00000428014 ULK4Q96C45 1275 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 LINC00615Q96LM1 132 aaPredicted RBP9.05□□□□□ -0.96
SMC1A-203ENST00000428014 ZNF578Q96N58 590 aaPredicted RBP9.05□□□□□ -0.96
SMC1A-203ENST00000428014 TMEM74Q96NL1 305 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 CNTNAP3BQ96NU0 1288 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 GORASP1Q9BQQ3 440 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 TLR10Q9BXR5 811 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.05□□□□□ -0.96
SMC1A-203ENST00000428014 CNTNAP3Q9BZ76 1288 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 TMEM168Q9H0V1 697 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 ABCG4Q9H172 646 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 TCEAL2Q9H3H9 227 aaPredicted RBP9.05□□□□□ -0.96
SMC1A-203ENST00000428014 CCDC86Q9H6F5 360 aaKnown RBP9.05□□□□□ -0.96
SMC1A-203ENST00000428014 CYP4F12Q9HCS2 524 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 SARS2Q9NP81 518 aaKnown RBP9.05□□□□□ -0.96
SMC1A-203ENST00000428014 IL26Q9NPH9 171 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 EIF2B3Q9NR50 452 aaKnown RBP9.05□□□□□ -0.96
SMC1A-203ENST00000428014 PDP2Q9P2J9 529 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 TSR3Q9UJK0 312 aaKnown RBP9.05□□□□□ -0.96
SMC1A-203ENST00000428014 PPP2R2CQ9Y2T4 447 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 AHCTF1Q8WYP5 2266 aa9.05□□□□□ -0.96
SMC1A-203ENST00000428014 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.04□□□□□ -0.96
SMC1A-203ENST00000428014 A0A087WV48 116 aa9.04□□□□□ -0.96
SMC1A-203ENST00000428014 LILRA5A6NI73 299 aa9.04□□□□□ -0.96
SMC1A-203ENST00000428014 FADS2P1A8MWK0 482 aa9.04□□□□□ -0.96
SMC1A-203ENST00000428014 QSOX1O00391 747 aa9.04□□□□□ -0.96
SMC1A-203ENST00000428014 HGSO14964 777 aaPredicted RBP9.04□□□□□ -0.96
SMC1A-203ENST00000428014 SLC25A14O95258 325 aaPredicted RBP9.04□□□□□ -0.96
SMC1A-203ENST00000428014 FTCDO95954 541 aa9.04□□□□□ -0.96
SMC1A-203ENST00000428014 FUCA1P04066 466 aa9.04□□□□□ -0.96
SMC1A-203ENST00000428014 PTMAP06454 111 aaKnown RBP9.04□□□□□ -0.96
SMC1A-203ENST00000428014 F3P13726 295 aa9.04□□□□□ -0.96
SMC1A-203ENST00000428014 VCLP18206 1134 aa9.04□□□□□ -0.96
SMC1A-203ENST00000428014 GCGRP47871 477 aa9.04□□□□□ -0.96
SMC1A-203ENST00000428014 CTBSQ01459 385 aa9.04□□□□□ -0.96
SMC1A-203ENST00000428014 ZFP36L1Q07352 338 aaKnown RBP9.04□□□□□ -0.96
SMC1A-203ENST00000428014 SEMA5AQ13591 1074 aa9.04□□□□□ -0.96
SMC1A-203ENST00000428014 GALNT3Q14435 633 aa9.04□□□□□ -0.96
SMC1A-203ENST00000428014 ISXQ2M1V0 245 aa9.04□□□□□ -0.96
SMC1A-203ENST00000428014 DEFB133Q30KQ1 61 aa9.04□□□□□ -0.96
SMC1A-203ENST00000428014 ZNF542PQ5EBM4 170 aa9.04□□□□□ -0.96
SMC1A-203ENST00000428014 DENND5AQ6IQ26 1287 aa9.04□□□□□ -0.96
SMC1A-203ENST00000428014 ABRAXAS1Q6UWZ7 409 aa9.04□□□□□ -0.96
SMC1A-203ENST00000428014 ARHGEF18Q6ZSZ5 1173 aa9.04□□□□□ -0.96
SMC1A-203ENST00000428014 EFL1Q7Z2Z2 1120 aaKnown RBP9.04□□□□□ -0.96
SMC1A-203ENST00000428014 RASGEF1CQ8N431 466 aa9.04□□□□□ -0.96
SMC1A-203ENST00000428014 BEND7Q8N7W2 519 aaPredicted RBP9.04□□□□□ -0.96
SMC1A-203ENST00000428014 FAM46DQ8NEK8 389 aa9.04□□□□□ -0.96
SMC1A-203ENST00000428014 MAPK15Q8TD08 544 aa9.04□□□□□ -0.96
SMC1A-203ENST00000428014 PBKQ96KB5 322 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms