RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 ATP1A4Q13733 1029 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 POLD3Q15054 466 aaPredicted RBP7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 PLA2G4EQ3MJ16 856 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 CYBRD1Q53TN4 286 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 GLYATQ6IB77 296 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 NANOGP8Q6NSW7 305 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 SLC2A7Q6PXP3 512 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 SPRED1Q7Z699 444 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 LRRC49Q8IUZ0 686 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 TBC1D21Q8IYX1 336 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 CDYL2Q8N8U2 506 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 FNDC5Q8NAU1 212 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 SMYD1Q8NB12 490 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 BPIFB6Q8NFQ5 453 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 ARRDC2Q8TBH0 407 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 IGSF8Q969P0 613 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 B3GALT6Q96L58 329 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 CDK15Q96Q40 435 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 SMIM14Q96QK8 99 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 ATOH8Q96SQ7 321 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 SLC30A3Q99726 388 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 SEZ6LQ9BYH1 1024 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 NANOGQ9H9S0 305 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 FLRT1Q9NZU1 646 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 IFT80Q9P2H3 777 aaPredicted RBP7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 IKZF3Q9UKT9 509 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 ACTL7AQ9Y615 435 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 NPEPPSL1A6NEC2 478 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 RAMP2O60895 175 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 NDUFS3O75489 264 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 C1RP00736 705 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 ATXN1LP0C7T5 689 aaKnown RBP7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 NFKBIAP25963 317 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 SLC26A3P40879 764 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 CPT1AP50416 773 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 POLR2JP52435 117 aaKnown RBP7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 OR4D2P58180 307 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 TNK2Q07912 1038 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 ZNF235Q14590 738 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 AFMIDQ63HM1 303 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 UGT3A1Q6NUS8 523 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 KIAA2013Q8IYS2 634 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 KLHL23Q8NBE8 558 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 RMDN1Q96DB5 314 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 NSMCE2Q96MF7 247 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 CYP2S1Q96SQ9 504 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 FANCEQ9HB96 536 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 ATP13A1Q9HD20 1204 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 COMMD10Q9Y6G5 202 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 SBF1O95248 1867 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 C1orf232A0A0U1RR37 186 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 ATP6V1G1O75348 118 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 MATN4O95460 622 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 RHOQP17081 205 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 TPP2P29144 1249 aaPredicted RBP7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 OR1E1P30953 314 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 GRK4P32298 578 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 POLR2IP36954 125 aaKnown RBP7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 NFKB2Q00653 900 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 PPP1R8Q12972 351 aaKnown RBP7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 AASDHQ4L235 1098 aaPredicted RBP7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 SLC44A4Q53GD3 710 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 PYCR3Q53H96 274 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 MS4A13Q5J8X5 152 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 FBXL22Q6P050 247 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 Q6ZNX1 250 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 SYVN1Q86TM6 617 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 ZC3H7AQ8IWR0 971 aaKnown RBP7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 UMODL1-AS1Q8N2C9 162 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 DDHD1Q8NEL9 900 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 RSPH1Q8WYR4 309 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 GPR21Q99679 349 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 AARSD1Q9BTE6 412 aaKnown RBP7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 SPON2Q9BUD6 331 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 BDH2Q9BUT1 245 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 TRIM54Q9BYV2 358 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 TFB2MQ9H5Q4 396 aaKnown RBP7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 SYTL2Q9HCH5 934 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 CD320Q9NPF0 282 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 FAIMQ9NVQ4 179 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 TAS2R13Q9NYV9 303 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 WARS2Q9UGM6 360 aaKnown RBP7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 ZNF510Q9Y2H8 683 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 GIT1Q9Y2X7 761 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 TRIP12Q14669 1992 aaPredicted RBP7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 ASPDHA6ND91 283 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 HAS3O00219 553 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 MUSKO15146 869 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 ZSCAN9O15535 394 aaPredicted RBP7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 RPP40O75818 363 aaKnown RBP7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 RSL1D1O76021 490 aaKnown RBP7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 KCNH1O95259 989 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 WISP3O95389 354 aaPredicted RBP7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 MATN1P21941 496 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 CD52P31358 61 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 HTR7P34969 479 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 CDKN1CP49918 316 aaPredicted RBP7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 ARPP19P56211 112 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 MTPNP58546 118 aa7.47□□□□□ -1.21
SMARCC1-202ENST00000425518 RAD51Q06609 339 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms