RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 SAP25Q8TEE9 199 aa17.98■□□□□ 0.47
PAX3-208ENST00000409828 LRRC1Q9BTT6 524 aa17.98■□□□□ 0.47
PAX3-208ENST00000409828 TRIM31Q9BZY9 425 aa17.98■□□□□ 0.47
PAX3-208ENST00000409828 ZCCHC2Q9C0B9 1178 aaKnown RBP17.98■□□□□ 0.47
PAX3-208ENST00000409828 FGF22Q9HCT0 170 aa17.98■□□□□ 0.47
PAX3-208ENST00000409828 TRNAU1APQ9NX07 287 aaKnown RBP17.98■□□□□ 0.47
PAX3-208ENST00000409828 DNAJC28Q9NX36 388 aa17.98■□□□□ 0.47
PAX3-208ENST00000409828 SYBUQ9NX95 663 aa17.98■□□□□ 0.47
PAX3-208ENST00000409828 SAMD15Q9P1V8 674 aa17.98■□□□□ 0.47
PAX3-208ENST00000409828 TMPRSS11EQ9UL52 423 aa17.98■□□□□ 0.47
PAX3-208ENST00000409828 PIKFYVEQ9Y2I7 2098 aa17.98■□□□□ 0.47
PAX3-208ENST00000409828 CNOT1A5YKK6 2376 aaKnown RBP17.97■□□□□ 0.47
PAX3-208ENST00000409828 PRSS38A1L453 326 aa17.97■□□□□ 0.47
PAX3-208ENST00000409828 INPP4BO15327 924 aa17.97■□□□□ 0.47
PAX3-208ENST00000409828 PIAS2O75928 621 aa17.97■□□□□ 0.47
PAX3-208ENST00000409828 TNFP01375 233 aa17.97■□□□□ 0.47
PAX3-208ENST00000409828 JUNDP17535 347 aa17.97■□□□□ 0.47
PAX3-208ENST00000409828 TERF1P54274 439 aa17.97■□□□□ 0.47
PAX3-208ENST00000409828 ARL4CP56559 192 aa17.97■□□□□ 0.47
PAX3-208ENST00000409828 HIF1AQ16665 826 aa17.97■□□□□ 0.47
PAX3-208ENST00000409828 DNTTIP2Q5QJE6 756 aaKnown RBP17.97■□□□□ 0.47
PAX3-208ENST00000409828 AFTPHQ6ULP2 937 aa17.97■□□□□ 0.47
PAX3-208ENST00000409828 KANSL1Q7Z3B3 1105 aa17.97■□□□□ 0.47
PAX3-208ENST00000409828 ALYREFQ86V81 257 aaKnown RBP17.97■□□□□ 0.47
PAX3-208ENST00000409828 KIAA2013Q8IYS2 634 aa17.97■□□□□ 0.47
PAX3-208ENST00000409828 PHACTR4Q8IZ21 702 aa17.97■□□□□ 0.47
PAX3-208ENST00000409828 FSTL5Q8N475 847 aaPredicted RBP17.97■□□□□ 0.47
PAX3-208ENST00000409828 NOA1Q8NC60 698 aaKnown RBP17.97■□□□□ 0.47
PAX3-208ENST00000409828 ZNF778Q96MU6 729 aa17.97■□□□□ 0.47
PAX3-208ENST00000409828 CARD6Q9BX69 1037 aa17.97■□□□□ 0.47
PAX3-208ENST00000409828 FOXP3Q9BZS1 431 aa17.97■□□□□ 0.47
PAX3-208ENST00000409828 SLC13A1Q9BZW2 595 aa17.97■□□□□ 0.47
PAX3-208ENST00000409828 GRHL1Q9NZI5 618 aa17.97■□□□□ 0.47
PAX3-208ENST00000409828 SPASTQ9UBP0 616 aa17.97■□□□□ 0.47
PAX3-208ENST00000409828 KLF15Q9UIH9 416 aa17.97■□□□□ 0.47
PAX3-208ENST00000409828 DNAH14Q0VDD8 3507 aa17.97■□□□□ 0.47
PAX3-208ENST00000409828 ARHGEF17Q96PE2 2063 aaPredicted RBP17.96■□□□□ 0.47
PAX3-208ENST00000409828 NEMP2A6NFY4 417 aa17.96■□□□□ 0.47
PAX3-208ENST00000409828 C4orf47A7E2U8 309 aa17.96■□□□□ 0.47
PAX3-208ENST00000409828 E7ESA3 106 aa17.96■□□□□ 0.47
PAX3-208ENST00000409828 CHUKO15111 745 aa17.96■□□□□ 0.47
PAX3-208ENST00000409828 EIF3HO15372 352 aaKnown RBP eCLIP17.96■□□□□ 0.47
PAX3-208ENST00000409828 NUAK1O60285 661 aa17.96■□□□□ 0.47
PAX3-208ENST00000409828 UGT1A9O60656 530 aa17.96■□□□□ 0.47
PAX3-208ENST00000409828 USP1O94782 785 aa17.96■□□□□ 0.47
PAX3-208ENST00000409828 TTC4O95801 387 aa17.96■□□□□ 0.47
PAX3-208ENST00000409828 PAMP19021 973 aa17.96■□□□□ 0.47
PAX3-208ENST00000409828 UGT1A6P19224 532 aa17.96■□□□□ 0.47
PAX3-208ENST00000409828 UGT1A1P22309 533 aa17.96■□□□□ 0.47
PAX3-208ENST00000409828 UGT1A4P22310 534 aa17.96■□□□□ 0.47
PAX3-208ENST00000409828 UGT1A3P35503 534 aa17.96■□□□□ 0.47
PAX3-208ENST00000409828 UGT1A5P35504 534 aa17.96■□□□□ 0.47
PAX3-208ENST00000409828 ARSDP51689 593 aa17.96■□□□□ 0.47
PAX3-208ENST00000409828 PRAMEP78395 509 aa17.96■□□□□ 0.47
PAX3-208ENST00000409828 CRADDP78560 199 aa17.96■□□□□ 0.47
PAX3-208ENST00000409828 TMPRSS15P98073 1019 aa17.96■□□□□ 0.47
PAX3-208ENST00000409828 GPRC6AQ5T6X5 926 aa17.96■□□□□ 0.47
PAX3-208ENST00000409828 LYPLAL1Q5VWZ2 237 aa17.96■□□□□ 0.47
PAX3-208ENST00000409828 KIAA0930Q6ICG6 404 aaPredicted RBP17.96■□□□□ 0.47
PAX3-208ENST00000409828 CERS6Q6ZMG9 384 aa17.96■□□□□ 0.47
PAX3-208ENST00000409828 NXPE1Q8N323 547 aa17.96■□□□□ 0.47
PAX3-208ENST00000409828 OR4L1Q8NH43 312 aa17.96■□□□□ 0.47
PAX3-208ENST00000409828 SCG3Q8WXD2 468 aaKnown RBP17.96■□□□□ 0.47
PAX3-208ENST00000409828 OR1E3Q8WZA6 343 aa17.96■□□□□ 0.47
PAX3-208ENST00000409828 ART4Q93070 314 aa17.96■□□□□ 0.47
PAX3-208ENST00000409828 HDAC10Q969S8 669 aa17.96■□□□□ 0.47
PAX3-208ENST00000409828 PDXPQ96GD0 296 aa17.96■□□□□ 0.47
PAX3-208ENST00000409828 ZNF514Q96K75 400 aaPredicted RBP17.96■□□□□ 0.47
PAX3-208ENST00000409828 UGT1A7Q9HAW7 530 aa17.96■□□□□ 0.47
PAX3-208ENST00000409828 UGT1A10Q9HAW8 530 aa17.96■□□□□ 0.47
PAX3-208ENST00000409828 UGT1A8Q9HAW9 530 aa17.96■□□□□ 0.47
PAX3-208ENST00000409828 IL21RQ9HBE5 538 aa17.96■□□□□ 0.47
PAX3-208ENST00000409828 APOBEC3BQ9UH17 382 aaKnown RBP17.96■□□□□ 0.47
PAX3-208ENST00000409828 PNMA8BQ9ULN7 279 aaPredicted RBP17.96■□□□□ 0.47
PAX3-208ENST00000409828 OAS3Q9Y6K5 1087 aaKnown RBP17.96■□□□□ 0.47
PAX3-208ENST00000409828 COL5A1P20908 1838 aaPredicted RBP17.95■□□□□ 0.46
PAX3-208ENST00000409828 IGLV3-16A0A075B6K0 115 aa17.95■□□□□ 0.46
PAX3-208ENST00000409828 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.95■□□□□ 0.46
PAX3-208ENST00000409828 CCDC162PA2VCL2 907 aa17.95■□□□□ 0.46
PAX3-208ENST00000409828 TPP1O14773 563 aa17.95■□□□□ 0.46
PAX3-208ENST00000409828 FLRT2O43155 660 aa17.95■□□□□ 0.46
PAX3-208ENST00000409828 GDF9O60383 454 aa17.95■□□□□ 0.46
PAX3-208ENST00000409828 DNAJC6O75061 913 aa17.95■□□□□ 0.46
PAX3-208ENST00000409828 DGKAP23743 735 aa17.95■□□□□ 0.46
PAX3-208ENST00000409828 NMBRP28336 390 aa17.95■□□□□ 0.46
PAX3-208ENST00000409828 HOXD11P31277 338 aaPredicted RBP17.95■□□□□ 0.46
PAX3-208ENST00000409828 FOXN2P32314 431 aa17.95■□□□□ 0.46
PAX3-208ENST00000409828 PPARGP37231 505 aaPredicted RBP17.95■□□□□ 0.46
PAX3-208ENST00000409828 TUBB4BP68371 445 aa17.95■□□□□ 0.46
PAX3-208ENST00000409828 MRPS25P82663 173 aaKnown RBP17.95■□□□□ 0.46
PAX3-208ENST00000409828 TMEM115Q12893 351 aaPredicted RBP17.95■□□□□ 0.46
PAX3-208ENST00000409828 LRP8Q14114 963 aa17.95■□□□□ 0.46
PAX3-208ENST00000409828 ITIH4Q14624 930 aa17.95■□□□□ 0.46
PAX3-208ENST00000409828 ELOCQ15369 112 aa17.95■□□□□ 0.46
PAX3-208ENST00000409828 INAVAQ3KP66 663 aa17.95■□□□□ 0.46
PAX3-208ENST00000409828 PRAMEF14Q5SWL7 426 aa17.95■□□□□ 0.46
PAX3-208ENST00000409828 FNBP1LQ5T0N5 605 aa17.95■□□□□ 0.46
PAX3-208ENST00000409828 CASC4Q6P4E1 433 aa17.95■□□□□ 0.46
PAX3-208ENST00000409828 LVRNQ6Q4G3 990 aa17.95■□□□□ 0.46
PAX3-208ENST00000409828 ADGRG6Q86SQ4 1221 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms